BAC Information

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BAC

Clone NameB6Ng01-004N12
Chromosome6 (Build37)
Map Location 25,460,928 - 25,627,726
singlet/doubletdoublet
Overlap geneGpr37
Upstream geneIqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358
Downstream genePot1a, EG626912, LOC100041210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004N12.bB6Ng01-004N12.g
ACCDH842145DH842146
length1,091613
definitionDH842145|Mus musculus domesticus DNA, BAC clone: B6Ng01-004N12, 5' end.DH842146|Mus musculus domesticus DNA, BAC clone: B6Ng01-004N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,626,635 - 25,627,726)(25,460,928 - 25,461,541)
sequence
gaattctaccctaactacagtgagaaataaaacctttttcataggaatta
aaaatggagtgcagttcgggctggtaaaacatttaaaacataaaattcca
tgtaacttgtaacaagtgacttcaatctgaaatattcattctgaagtact
ttataagtcttcaaatttaccaatgtacgagctccatctctcaaatgtat
cagaagataaaaggaagctttgccattcagacactaaatgatcctttgaa
tgatgaaagggatagatgaagtgaatgacctttgttctgggctattattt
tcctaaagaagagaaaatcttttcaactttatgagggtcactgtacatgt
caggaccaacagaaagcatattgagagccaaattctgggtggtcttcagg
gtctcttgcctgtgtacttcattgtttcagcctacagttttgaatgcatt
ccttaaggtatacttcatgaccatatgaattgttagtatgtaatttaaaa
agccaaatcccaagtttatgccattgtgatggcttatatagtaattggtg
ttattttccaagatgcagatcataatctttggaaatgtataatctggaaa
gttttatcatttggtcagcttaggaagctagttcgacacctgtatcggac
gtctccttgttagttatataggagcagataggaggtgacaaaggagttat
actttttgatatgatgccaattgtggacaatatatatgccttgttcacta
tcattcttgttatgaagcatgatataacatatgtatattgctataagtat
gtgtgcatatatacatttttatatgagtatgtctatgtgtttatgaataa
acattaatgttatagcatttgggctgatgtaacactcttcttttgctact
aaaaatagaattcattatgtccacccttgctgctgaaattgtgttaatca
cacttcaagtttgattcaggagagtgactctaagcacttactgtacttaa
gctttgactctctacagcttcctgggttcctttctcagactggactattg
cgtttcaatcttgaccctgggctacgctcatgagcacaaga
gaattcactgaagcatatggacttcaaataaaaaaaatatttcttttttt
ttttttttattcaatatatgtgggactttatttgctgaggttttttttct
ttttttttcccaattttttcaattaggtatttacttcatttatatttcaa
atgctatcctgaaagacccctatattgcccccctcccccactcccctacc
cacccactcctacttcttggccctggtgtttcccctgtactggggcatat
aaagtttgtgagaccaaggggcctctcttcccaatgatggccaattaggc
catcttctgctacatatgcagctagagacacaagctctgggggtactggt
tagttcatattgttgttccacctatagggctgaagaccccttcagctcct
tgggtattttctctagctcctccattgggggccctgtgatccatccaata
gctgactttgagcatccacttctgtgtttgccacacactggcctagcctc
acacaagacagctatatcagggtcctttcagcaaaatcttgctagtgtgt
gcaatggtgtcagggtttgggggccgattatgggatggatccatgggtat
ggcagtctctaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_25626635_25627726
seq2: B6Ng01-004N12.b_47_1137 (reverse)

seq1  TCTTGTGCTTCATAGAGCTGTAG-CCAGGGTCAAGATGGAAACGGCAATA  49
      |||||||| |||| |||| |||| ||||||||||||| ||||| ||||||
seq2  TCTTGTGC-TCAT-GAGC-GTAGCCCAGGGTCAAGATTGAAAC-GCAATA  46

seq1  GTCCATGTCTGAGAAAGGACCCAGGGAAGCTGTAGAGAGTCAAAGCTTAA  99
      ||||| ||||||||||||| ||  ||||||||||||||||||||||||||
seq2  GTCCA-GTCTGAGAAAGGAACCCAGGAAGCTGTAGAGAGTCAAAGCTTAA  95

seq1  GTACAGTATGTGCTTAAGAGTCACTCTCCTGAATCAAACTTGAAGTGTGA  149
      |||||||| |||||| ||||||||||||||||||||||||||||||||||
seq2  GTACAGTAAGTGCTT-AGAGTCACTCTCCTGAATCAAACTTGAAGTGTGA  144

seq1  TTAACACAATTTCAGCAGC-ATGGTGGACATATTGAATTCTATTTTTAGT  198
      ||||||||||||||||||| | |||||||||| |||||||||||||||||
seq2  TTAACACAATTTCAGCAGCAAGGGTGGACATAATGAATTCTATTTTTAGT  194

seq1  AGCAAA--GAGAGTGTTACATCAGCCC-AATGCTATAAACATTAATGTTT  245
      ||||||   |||||||||||||||||| |||||||| |||||||||||||
seq2  AGCAAAAGAAGAGTGTTACATCAGCCCAAATGCTAT-AACATTAATGTTT  243

seq1  ATTCATAAACACATAGACATACTCATATAAAAATGTATATATGCACACAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAACACATAGACATACTCATATAAAAATGTATATATGCACACAT  293

seq1  ACTTATAGCAATATACATATGTTATATCATGCTTCATAACAAGAATGATA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAGCAATATACATATGTTATATCATGCTTCATAACAAGAATGATA  343

seq1  GTGAACAAGGCATATATATTGTCCACAATTGGCATCATATC-AAAAGTAT  394
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGAACAAGGCATATATATTGTCCACAATTGGCATCATATCAAAAAGTAT  393

seq1  AACTCCTTTGTCACCTCCTATCTGCTCCTATATAACTAACAAGGAGACGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTTTGTCACCTCCTATCTGCTCCTATATAACTAACAAGGAGACGT  443

seq1  CCGATACAGGTGTCGAACTAGCTTCCTAAGCTGACCAAATGATAAAACTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATACAGGTGTCGAACTAGCTTCCTAAGCTGACCAAATGATAAAACTT  493

seq1  TCCAGATTATACATTTCCAAAGATTATGATCTGCATCTTGGAAAATAACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATTATACATTTCCAAAGATTATGATCTGCATCTTGGAAAATAACA  543

seq1  CCAATTACTATATAAGCCATCACAATGGCATAAACTTGGGATTTGGCTTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTACTATATAAGCCATCACAATGGCATAAACTTGGGATTTGGCTTT  593

seq1  TTAAATTACATACTAACAATTCATATGGTCATGAAGTATACCTTAAGGAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTACATACTAACAATTCATATGGTCATGAAGTATACCTTAAGGAA  643

seq1  TGCATTCAAAACTGTAGGCTGAAACAATGAAGTACACAGGCAAGAGACCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCAAAACTGTAGGCTGAAACAATGAAGTACACAGGCAAGAGACCC  693

seq1  TGAAGACCACCCAGAATTTGGCTCTCAATATGCTTTCTGTTGGTCCTGAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACCACCCAGAATTTGGCTCTCAATATGCTTTCTGTTGGTCCTGAC  743

seq1  ATGTACAGTGACCCTCATAAAGTTGAAAAGATTTTCTCTTCTTTAGGAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAGTGACCCTCATAAAGTTGAAAAGATTTTCTCTTCTTTAGGAAA  793

seq1  ATAATAGCCCAGAACAAAGGTCATTCACTTCATCTATCCCTTTCATCATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGCCCAGAACAAAGGTCATTCACTTCATCTATCCCTTTCATCATT  843

seq1  CAAAGGATCATTTAGTGTCTGAATGGCAAAGCTTCCTTTTATCTTCTGAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATCATTTAGTGTCTGAATGGCAAAGCTTCCTTTTATCTTCTGAT  893

seq1  ACATTTGAGAGATGGAGCTCGTACATTGGTAAATTTGAAGACTTATAAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAGAGATGGAGCTCGTACATTGGTAAATTTGAAGACTTATAAAG  943

seq1  TACTTCAGAATGAATATTTCAGATTGAAGTCACTTGTTACAAGTTACATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGAATGAATATTTCAGATTGAAGTCACTTGTTACAAGTTACATG  993

seq1  GAATTTTATGTTTTAAATGTTTTACCAGCCCGAACTGCACTCCATTTTTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTATGTTTTAAATGTTTTACCAGCCCGAACTGCACTCCATTTTTA  1043

seq1  ATTCCTATGAAAAAGGTTTTATTTCTCACTGTAGTTAGGGTAGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATGAAAAAGGTTTTATTTCTCACTGTAGTTAGGGTAGAATTC  1091

seq1: chr6_25460928_25461541
seq2: B6Ng01-004N12.g_68_680

seq1  GAATTCACTGAAGCATATGGACTTCAAATAAAAAAAATATTTCTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAATTCACTGAAGCATATGGACTTCAAATAAAAAAAATATTTC-TTTTTT  49

seq1  TTTTTTTTTATTCAATATATGTGGGACTTTATTTGCTGAGGTTTTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTATTCAATATATGTGGGACTTTATTTGCTGAGGTTTTTTTTC  99

seq1  TTTTTTTTTCCCAATTTTTTCAATTAGGTATTTACTTCATTTATATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCCCAATTTTTTCAATTAGGTATTTACTTCATTTATATTTCA  149

seq1  AATGCTATCCTGAAAGACCCCTATATTGCCCCCCTCCCCCACTCCCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATCCTGAAAGACCCCTATATTGCCCCCCTCCCCCACTCCCCTAC  199

seq1  CCACCCACTCCTACTTCTTGGCCCTGGTGTTTCCCCTGTACTGGGGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACTCCTACTTCTTGGCCCTGGTGTTTCCCCTGTACTGGGGCATA  249

seq1  TAAAGTTTGTGAGACCAAGGGGCCTCTCTTCCCAATGATGGCCAATTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTGTGAGACCAAGGGGCCTCTCTTCCCAATGATGGCCAATTAGG  299

seq1  CCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCTGGGGGTACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCTGGGGGTACTGG  349

seq1  TTAGTTCATATTGTTGTTCCACCTATAGGGCTGAAGACCCCTTCAGCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCATATTGTTGTTCCACCTATAGGGCTGAAGACCCCTTCAGCTCC  399

seq1  TTGGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAAT  449

seq1  AGCTGACTTTGAGCATCCACTTCTGTGTTTGCCACACACTGGCCTAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACTTTGAGCATCCACTTCTGTGTTTGCCACACACTGGCCTAGCCT  499

seq1  CACACAAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTAGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTAGTGTG  549

seq1  TGCAATGGTGTCAGGGTTTGGGGGCCGATTATGGGATGGATCCATGGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGGTGTCAGGGTTTGGGGGCCGATTATGGGATGGATCCATGGGTA  599

seq1  TGGCAGTCTCTAGA  614
      |||||||||||| |
seq2  TGGCAGTCTCTAAA  613