BAC Information

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BAC

Clone NameB6Ng01-005A22
Chromosome6 (Build37)
Map Location 74,261,500 - 74,475,913
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr210-ps1, 4931417E11Rik, LOC100043338
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005A22.bB6Ng01-005A22.g
ACCDH842302DH842303
length1,0991,019
definitionDH842302|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A22, 5' end.DH842303|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,261,500 - 74,262,633)(74,474,892 - 74,475,913)
sequence
gaattcaatggggaagaagtctttagggacaacaaacattggcttctgaa
tgaatatccgctatgttatcatatatgttaggtcactttgtgtatgtcta
gtagtatctcaatatctgtgagctttctcaacagttatgtataccaggaa
acctttatataagataattgactcttattaatatatcaattgtcattctg
ttggaacaaaacctagaaaccttaatattacaactagcaagttcatatca
tttggtgttgtatctgagtgccactgtggtattttttatactctggtagt
ctgtaagtatgccatgagctgatacatatacttgaaatgtacggttgtcc
ataaaagagatgaaacttcgtgtctatttgaagactttatgaaacaaaac
aacacatgaaagaacttattaaaatgtcttttgataataggctatgtcca
tcctgtcaacatatttaagttttaaactttcttttgaaacatttttggag
cctttatgatacatgtacagatgcctttctctgactttacattttgaagg
gcttggaaagaaaacaagtgaatggcctactctttctagtgtggctgctg
aaggcaaagattcccggtccttggtgattggacacatgctcattccatcc
ttttggagttctatgcagtttggatgtctgttaacttaatacactcattg
ttgtgtcctttaccatgttttatttctttgtaaatatgtcactttactgc
taaggtcataatcagaaacacattatatgctcataaatattctatgacat
actggttgaattacaagtggataaggtggcataatttcaattggactatt
agcatattaaacatggtcacaaaagatgtgaggagataacttctataagt
tacagtgaggtcatgctacaaataaaatcatgtctttattcatttgtctc
atgtggcagttatgatagagcacaaagtagacaaaataatgagctgctgc
tagtcacttcgatgcttatgttacataagttaaaaattattatgaagcat
tataactttatatatcactaggaaaggatctttcagtacctggctctag
gaattctgtttctctcctatcatgctgttcagcagcatcctgctttgtct
tctttcttttattatattttattatttaaaagaattttaaatttaaatag
attttgatcatattctccctcccataattccttcaagatcctcttcacct
ataactttaaggtctttgtcaccaaacaaaaccagtacaaaaaaaaataa
atatatctaaggaaacaaagtgtcacctgccctgcaaatacaaataaatg
cacacacgcacgcacacacacaatacagtaaagttcattatatgttggtc
aactagtgccgaacataagcctgccctggagtctacacatctattcctgg
tttagtgtatttatgggaaagtgagtctaagaacaagtagctctttcact
ttttttttttttttttttttttttttgctttctctggagctctttttctt
cttttggtttgtattttccaactttgatgtgaccatatgtgttttatctt
attatatgtatagtatatacataaatacatattttaaatgggtgaattaa
tgaaaacacagtgaataggaaggagggtaacaaccaaattgtaatttata
cctggcaggaaaagaaaaatcagttttctccaattgagtgacattttcct
cccctttaatatcatttcctactcaccctcaaaaatttttcctcatcctt
attgtatcattttcaggtgaaaacatactgcatcaccaaagtaagaactt
tcaaaaacatattgtttttagcattacatcaaaacctattatgtggacag
cgactgctttaatataaacttgttacagtaagttttcacccaacatttgc
tatcatcgtaataaatgacagaatatttctgaaggcaattacgttatttc
acagttcatggcacttcgggcatgaaatttcaaaatgtgttgtactgata
tcaaatatatgtcatcagagagcttcagcatttaatttgtgtaatcatat
atcagatgaccattgtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74261500_74262633
seq2: B6Ng01-005A22.b_48_1146

seq1  GAATTCAATGGGGAAGAAGTCTTTAGGGACAACAAACATTGGCTTCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGGGAAGAAGTCTTTAGGGACAACAAACATTGGCTTCTGAA  50

seq1  TGAATATCCGCTATGTTATCATATATGTTAGGTCACTTTGTGTATGTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATCCGCTATGTTATCATATATGTTAGGTCACTTTGTGTATGTCTA  100

seq1  GTAGTATCTCAATATCTGTGAGCTTTCTCAACAGTTATGTATACCAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATCTCAATATCTGTGAGCTTTCTCAACAGTTATGTATACCAGGAA  150

seq1  ACCTTTATATAAGATAATTGACTCTTATTAATATATCAATTGTCATTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATATAAGATAATTGACTCTTATTAATATATCAATTGTCATTCTG  200

seq1  TTGGAACAAAACCTAGAAACCTTAATATTACAACTAGCAAGTTCATATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACAAAACCTAGAAACCTTAATATTACAACTAGCAAGTTCATATCA  250

seq1  TTTGGTGTTGTATCTGAGTGCCACTGTGGTATTTTTTATACTCTGGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGTTGTATCTGAGTGCCACTGTGGTATTTTTTATACTCTGGTAGT  300

seq1  CTGTAAGTATGCCATGAGCTGATACATATACTTGAAATGTACGGTTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGTATGCCATGAGCTGATACATATACTTGAAATGTACGGTTGTCC  350

seq1  ATAAAAGAGATGAAACTTCGTGTCTATTTGAAGACTTTATGAAACAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAGATGAAACTTCGTGTCTATTTGAAGACTTTATGAAACAAAAC  400

seq1  AACACATGAAAGAACTTATTAAAATGTCTTTTGATAATAGGCTATGTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGAAAGAACTTATTAAAATGTCTTTTGATAATAGGCTATGTCCA  450

seq1  TCCTGTCAACATATTTAAGTTTTAAACTTTCTTTTGAAACATTTTTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCAACATATTTAAGTTTTAAACTTTCTTTTGAAACATTTTTGGAG  500

seq1  CCTTTATGATACATGTACAGATGCCTTTCTCTGACTTTACATTTTGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATGATACATGTACAGATGCCTTTCTCTGACTTTACATTTTGAAGG  550

seq1  GCTTGGAAAGAAAACAAGTGAATGGCCTACTCTTTCTAGTGTGGCTGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAAAGAAAACAAGTGAATGGCCTACTCTTTCTAGTGTGGCTGCTG  600

seq1  AAGGCAAAGATTCCCGGTCCTTGGTGATTGGACACATGCTCATTCCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAAGATTCCCGGTCCTTGGTGATTGGACACATGCTCATTCCATCC  650

seq1  TTTTGGAGTTCTATGCAGTTTGGATGTCTGTTAACTTAATACACTCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAGTTCTATGCAGTTTGGATGTCTGTTAACTTAATACACTCATTG  700

seq1  TTGTGTCCTTTACCATGTTTTATTTCTTTGTAAATATGTCACTTTACTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCTTTACCATGTTTTATTTCTTTGTAAATATGTCACTTTACTGC  750

seq1  TAAGGTCATAATCAGAAACACATTATATGCTCATAAATATTCTATGACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCATAATCAGAAACACATTATATGCTCATAAATATTCTATGACAT  800

seq1  ACTGGTTGAATTACAAGTGGATAAGGTGGCATAA-TTCAATTGGACTATT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACTGGTTGAATTACAAGTGGATAAGGTGGCATAATTTCAATTGGACTATT  850

seq1  AGCATATTAAACATGGTCACAAAAGATGTGAGGAGATAACTTCTATAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTAAACATGGTCACAAAAGATGTGAGGAGATAACTTCTATAAGT  900

seq1  TAACAGTGAGGTCATGCTACAAAATAAAATCATGTCTTTTATTCATTTTG  949
      | |||||||||||||||||| ||||||||||||||| |||||||| ||||
seq2  T-ACAGTGAGGTCATGCTAC-AAATAAAATCATGTC-TTTATTCA-TTTG  946

seq1  TCTTCATGTTGCCAGTTTATGAATAGAGCACAAAAGGTAGACAAAATAAA  999
      || ||||| || ||| ||||| ||||||||||||  ||||||||||||| 
seq2  TC-TCATG-TGGCAG-TTATG-ATAGAGCACAAA--GTAGACAAAATAAT  990

seq1  GGGAGCCTGCTGCTTAAGTCACTTCGATTGCTTTATG-TACATAAAGTAT  1048
      | |   ||||||||  ||||||||||| ||| ||||| |||||||  |  
seq2  GAG---CTGCTGCT--AGTCACTTCGA-TGC-TTATGTTACATAAGTT--  1031

seq1  AAAAAAATTATTATTTAAAGCATTTATTATACTTTATTAATTATTCACTA  1098
        |||||||||||  | ||||| ||||   |||||||  |    ||||||
seq2  --AAAAATTATTA--TGAAGCA-TTAT--AACTTTATATA----TCACTA  1070

seq1  GGGGAAAAGATACCTTTTCAGTACACCTTGCTCTAG  1134
        ||||| |||    |||||||  |||| |||||||
seq2  --GGAAAGGAT---CTTTCAGT--ACCTGGCTCTAG  1099

seq1: chr6_74474892_74475913
seq2: B6Ng01-005A22.g_68_1086 (reverse)

seq1  TTTACAATGTGTCATTCTTGATATATGGATTACACAAATTAAATGCTGAA  50
      ||||||||| |||||   |||||||| |||||||||||||||||||||||
seq2  TTTACAATG-GTCAT--CTGATATAT-GATTACACAAATTAAATGCTGAA  46

seq1  GCTTCCTTCTGATTGACATATATTTGATATCAGTACCACCACATTTTGAA  100
      |||    ||||| |||||||||||||||||||||| || |||||||||||
seq2  GCT---CTCTGA-TGACATATATTTGATATCAGTA-CAACACATTTTGAA  91

seq1  ATTTTCATTGCCGAAGTGCCATGAACTGTGAAAT-ACGTAATTGCTTTCA  149
      | ||||||  |||||||||||||||||||||||| |||||||||| ||||
seq2  A-TTTCATGCCCGAAGTGCCATGAACTGTGAAATAACGTAATTGCCTTCA  140

seq1  G-AATATTCTGTCA-TTATTACGATGACTAGGCAATGTTTGGTGAAAACT  197
      | |||||||||||| |||||||||||| |||  |||||| ||||||||||
seq2  GAAATATTCTGTCATTTATTACGATGA-TAGCAAATGTTGGGTGAAAACT  189

seq1  TACTGT-ACAAGTTTATATTTAAAGCAGTCGCTGTCCACATAATAGGTTT  246
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  TACTGTAACAAGTTTATA-TTAAAGCAGTCGCTGTCCACATAATAGGTTT  238

seq1  TGATGTAATGCTAAAAACATGATGTTTTTG-AAGGTCTTACTTT-GTGAT  294
      |||||||||||||||||||  ||||||||| ||| ||||||||| |||||
seq2  TGATGTAATGCTAAAAACAATATGTTTTTGAAAGTTCTTACTTTGGTGAT  288

seq1  GCAGTATGTTTTCAACTG-AAATGATACAATAAGGATGAGGAAAATATTT  343
      |||||||||||||| ||| ||||||||||||||||||||||||||  |||
seq2  GCAGTATGTTTTCACCTGAAAATGATACAATAAGGATGAGGAAAAATTTT  338

seq1  TGAAGGTGAGTAGG-AATGATATTAAA-AGGAGGAAAATGTCACTCAATT  391
      ||| |||||||||| ||||||||||||  |||||||||||||||||||||
seq2  TGAGGGTGAGTAGGAAATGATATTAAAGGGGAGGAAAATGTCACTCAATT  388

seq1  GGAGAAAACTGATTTTTCTTTTCCTGCCAGGTATAAATTACAATTTGGTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAACTGATTTTTCTTTTCCTGCCAGGTATAAATTACAATTTGGTT  438

seq1  GTTACCCTCCTTCCTATTCACTGTGTTTTCATTAATTCACCCATTTAAAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCTCCTTCCTATTCACTGTGTTTTCATTAATTCACCCATTTAAAA  488

seq1  TATGTATTTATGTATATACTATACATATAATAAGATAAAACACATATGGT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTTATGTATATACTATACATATAATAAGATAAAACACATATGGT  538

seq1  CACATCAAAGTTGGAAAATACAAACCAAAAGAAGAAAAAGAGCTCCAGAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAAAGTTGGAAAATACAAACCAAAAGAAGAAAAAGAGCTCCAGAG  588

seq1  AAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGAAAGAGCTACTTGTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGAAAGAGCTACTTGTT  638

seq1  CTTAGACTCACTTTCCCATAAATACACTAAACCAGGAATAGATGTGTAGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACTCACTTTCCCATAAATACACTAAACCAGGAATAGATGTGTAGA  688

seq1  CTCCAGGGCAGGCTTATGTTCGGCACTAGTTGACCAACATATAATGAACT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGCAGGCTTATGTTCGGCACTAGTTGACCAACATATAATGAACT  738

seq1  TTACTGTATTGTGTGTGTGCGTGCGTGTGTGCATTTATTTGTATTTGCAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTATTGTGTGTGTGCGTGCGTGTGTGCATTTATTTGTATTTGCAG  788

seq1  GGCAGGTGACACTTTGTTTCCTTAGATATATTTATTTTTTTTTGTACTGG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTGACACTTTGTTTCCTTAGATATATTTATTTTTTTTTGTACTGG  838

seq1  TTTTGTTTGGTGACAAAGACCTTAAAGTTATAGGTGAAGAGGATCTTGAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGGTGACAAAGACCTTAAAGTTATAGGTGAAGAGGATCTTGAA  888

seq1  GGAATTATGGGAGGGAGAATATGATCAAAATCTATTTAAATTTAAAATTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATGGGAGGGAGAATATGATCAAAATCTATTTAAATTTAAAATTC  938

seq1  TTTTAAATAATAAAATATAATAAAAGAAAGAAGACAAAGCAGGATGCTGC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATAATAAAATATAATAAAAGAAAGAAGACAAAGCAGGATGCTGC  988

seq1  TGAACAGCATGATAGGAGAGAAACAGAATTC  1022
      |||||||||||||||||||||||||||||||
seq2  TGAACAGCATGATAGGAGAGAAACAGAATTC  1019