BAC Information

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BAC

Clone NameB6Ng01-005F12
Chromosome6 (Build37)
Map Location 81,614,173 - 81,614,480
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042991
Downstream geneLOC232143, 1700009C05Rik, AW146020, Mrpl19, Tmem166, EG622198, Tacr1, Pole4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005F12.bB6Ng01-005F12.g
ACCDH842504DH842505
length1,123308
definitionDH842504|Mus musculus domesticus DNA, BAC clone: B6Ng01-005F12, 5' end.DH842505|Mus musculus domesticus DNA, BAC clone: B6Ng01-005F12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggggcagttcttctgtcttctgtaggtgtcaagggatgctgag
tggggcttctctccctccaccatgtcacctcacagcagagaaggagctgg
gccagcttttctatgtttatatcctcatggctggctttcctgtgcccctg
ctgcccccagggtcagcagcgctattgtgctgctcaggtgaggtgcaggg
ctactctccccaggcagctggtgaggggcagggccttctctgttattctc
aggtctccagggccaggtctcatgcctgctgcagatagtcagggacagca
ggggaggagggtatctctcctatgaatacaacattgcatgagagacaagt
ggtagagccaactctcccacactcatatccctggggctggctcaaccaca
actcctgcaatgtgcggggtctgctttcctgactactgtagctagagaag
gctgggttcagctttcctgttctcatgtccccagggccagctcccccaag
atgctcaggtgaggtgtggggccaattctgcacagctctcagacatcacc
atgtccacggtgacaggccagaccagggacatccacctggcttttaaagg
taacagctctgctgctgcaggaccattgatatagataaggctcctggtgg
cagcacaggccaggacccctccatggtctcagatggcctcaccagccact
cacatcaggctgtaccttcctaccctttactctccagctttgcctctctt
cattgtgccctcatccttctgtttctctttctttcatttctccaccactt
acttgttcctcttcgtggtgcctggggtctctgagtgtctggagtgacct
caggagtgctatgccccacttgtgcattacggcattgggcaggcgtcatc
ttggtcatggtctgctcaatgcttggtggtcatttcaggctagctttctg
ttcagactctacggaactggctgttgtttgtcatgggcttacttctagcc
ttgtcagcccagtgcctttgccaggtcatttgtctctgcccaagtcagag
ctcaggtggggttcttctatgctcatttgctcctttcttggagccaattg
gtactgggccttgtatgatatgg
tttctaatctgatggagcaaatatgggaaattaaataaataataaataga
tgaatgacaagacagatgactggtaataaaaatatgataagtaaaaatat
gcatagatagaagaaaatgatatgaggatatactgatgctatatagatca
tagtgagacaataagtgatgtgtgagtaataggtaatacatagattgata
cacaaatagatgacacatacataaataataggtttttgacagatgatgga
tgattgatagatgatagatagatagatagatagatagatagatagataga
tagataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_81614173_81614480
seq2: B6Ng01-005F12.g_73_380

seq1  TTTCTAATCTGATGGAGCAAATATGGGAAATTAAATAAATAATAAATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAATCTGATGGAGCAAATATGGGAAATTAAATAAATAATAAATAGA  50

seq1  TGAATGACAAGACAGATGACTGGTAATAAAAATATGATAAGTAAAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGACAAGACAGATGACTGGTAATAAAAATATGATAAGTAAAAATAT  100

seq1  GCATAGATAGAAGAAAATGATATGAGGATATACTGATGCTATATAGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGATAGAAGAAAATGATATGAGGATATACTGATGCTATATAGATCA  150

seq1  TAGTGAGACAATAAGTGATGTGTGAGTAATAGGTAATACATAGATTGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGACAATAAGTGATGTGTGAGTAATAGGTAATACATAGATTGATA  200

seq1  CACAAATAGATGACACATACATAAATAATAGGTTTTTGACAGATGATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATAGATGACACATACATAAATAATAGGTTTTTGACAGATGATGGA  250

seq1  TGATTGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  300

seq1  TAGATAGA  308
      ||||||||
seq2  TAGATAGA  308