BAC Information

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BAC

Clone NameB6Ng01-005K23
Chromosome6 (Build37)
Map Location 130,493,675 - 130,665,304
singlet/doubletdoublet
Overlap geneLOC667793, EG667798
Upstream geneKlre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779
Downstream geneEG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005K23.bB6Ng01-005K23.g
ACCDH842754DH842755
length1,0841,104
definitionDH842754|Mus musculus domesticus DNA, BAC clone: B6Ng01-005K23, 5' end.DH842755|Mus musculus domesticus DNA, BAC clone: B6Ng01-005K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,493,675 - 130,494,763)(130,664,199 - 130,665,304)
sequence
gaattcaatggagaaacataatatgtatatcaaaaaagtacagaaagaga
aggacttcagagcacgtagtcttatataattttttatcataacctcctat
caaaggatcaggaacctaaacagaagatgacacaaaaggattttaaaggc
cagattaaatgtatgatgctaaataaaatacatgtttacccgatgcaact
agaacaatgttcacataaactcaatgagaatatgacagcaatcacaagac
cagtacaaggaagacaatactctagctttaagaaggagaaagagttagaa
tgtgtcacccaaaggcagaaagttcacaaattcctagagagggaaaataa
attttatactatgtatggacacgtgttcgattaagtaaaatttgctaaaa
caaaccagtctccatgattaaatacatttttggtttctactttttttttc
atctgagagaaagagaaagagagagagacaaaaagtgagaggaaaagata
gaggcagaaaaagagacaaaaagacagaaaagtcagagaaatcatgatat
tgagtttgtttagagagtcgagatggtctacaagaagctgaaaaagagaa
aattatgagaaaaatataccctataaaacaactaaaaatggaataaatca
ataaattactcaaatataaatgatcattactgatcattcacatgtaacag
aaaaaataatagtaattagattataatctgctactttataaaatcattga
aacagtatatttcaaaacatgagtattcatgtaaaatgaggcagagatca
tatagtatccatggttatacggtttcttttattcattaactgaaagaaat
tcttaggaacaatttctattgcagagtttttctagccatatgtcagtcta
gattattcctggttttacagccatcacatgacatataatttcacttcaaa
tttcctgtttttttttcctccatattgtctctatcagcattcatgttttc
tttgtttgttcaggacagaaggttacctctgacattgaaggagcaccact
gtacattccaatgagcacaaaaatagtgcattga
gaattcctgaattcttgcctctttgtcccaaattctgaagctacatttgt
ccatacttgtatttatccacattaataatttaagatttgatcatttttca
tagattcactattcatctttccctgcctattatgaaaaagactggctgac
acattatgctaattatttcagagtcttacctctattgaaccctggtctat
aaaggaattgtcttcctttcccacatatattgaagaaacttttaattatt
agttattatttgatcagatacctgttcctaagccaagtcagaactggttt
tttatcctgctaattcagactcccaaaatcttatcacccatttttcctct
caaaggatgagtttatagatatgtatcacctttcctttgatttatattct
attcaacttttaaaattattttcacagcaatgtagatttgggacacctaa
taaacaatacagcagagactgcagtgtgttgaatacagggaagtctttca
atcaccatgtttcaatgaataacttttagctttgacgttaagaagaaaaa
gacaaaaaaccaaccaaacaaactgtgttcataaaccatcatttgtacct
ttattacacacctttttctctataaaaagcaggcatatgagaccttgtat
tgtattttacatacatttatttcttcctttaaatctattgtcattgctca
aagtataatatgagagcattttcagtataaaactattgcttattatttca
gcaatgatggaaaaaaattctacttgctggataaagatactggtatgaaa
agcataatgtgttgagctgttatcagagacaatattttttgttactatgt
taatgtatttttgggtggattaatttgcatgcacatatacaggtcccaca
gcaacagagcaattagtggacatctgaaaagaataaatttctctttatta
ttgaggcatctgagggctaaactgagctcctccaggtttggtgtcaacag
tctcaactcaatttagccactgggcctagacaatactttagcagttaggt
aaaacagattttagtggaaaccacatttatttaaattcatattcttgcac
ttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130493675_130494763
seq2: B6Ng01-005K23.b_44_1127

seq1  GAATTCAATGGAGAAACATAATATGTATATCAAAAAAGTACAGAAAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGAGAAACATAATATGTATATCAAAAAAGTACAGAAAGAGA  50

seq1  AGGACTTCAGAGCACGTAGTCTTATATAATTTTTTATCATAACCTCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTCAGAGCACGTAGTCTTATATAATTTTTTATCATAACCTCCTAT  100

seq1  CAAAGGATCAGGAACCTAAACAGAAGATGACACAAAAGGATTTTAAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATCAGGAACCTAAACAGAAGATGACACAAAAGGATTTTAAAGGC  150

seq1  CAGATTAAATGTATGATGCTAAATAAAATACATGTTTACCCGATGCAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAAATGTATGATGCTAAATAAAATACATGTTTACCCGATGCAACT  200

seq1  AGAACAATGTTCACATAAACTCAATGAGAATATGACAGCAATCACAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAATGTTCACATAAACTCAATGAGAATATGACAGCAATCACAAGAC  250

seq1  CAGTACAAGGAAGACAATACTCTAGCTTTAAGAAGGAGAAAGAGTTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAAGGAAGACAATACTCTAGCTTTAAGAAGGAGAAAGAGTTAGAA  300

seq1  TGTGTCACCCAAAGGCAGAAAGTTCACAAATTCCTAGAGAGGGAAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCACCCAAAGGCAGAAAGTTCACAAATTCCTAGAGAGGGAAAATAA  350

seq1  ATTTTATACTATGTATGGACACGTGTTCGATTAAGTAAAATTTGCTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATACTATGTATGGACACGTGTTCGATTAAGTAAAATTTGCTAAAA  400

seq1  CAAACCAGTCTCCATGATTAAATACATTTTTGGTTTCTACTTTTTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAGTCTCCATGATTAAATACATTTTTGGTTTCTACTTTTTTTTTC  450

seq1  ATCTGAGAGAAAGAGAAAGAGAGAGAGACAAAAAGTGAGAGGAAAAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAGAAAGAGAAAGAGAGAGAGACAAAAAGTGAGAGGAAAAGATA  500

seq1  GAGGCAGAAAAAGAGACAAAAAGACAGAAAAGTCAGAGAAATCATGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAAAAAGAGACAAAAAGACAGAAAAGTCAGAGAAATCATGATAT  550

seq1  TGAGTTTGTTTAGAGAGTCGAGATGGTCTACAAGAAGCTGAAAAAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGTTTAGAGAGTCGAGATGGTCTACAAGAAGCTGAAAAAGAGAA  600

seq1  AATTATGAGAAAAATATACCCTATAAAACAACTAAAAATGGAATAAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGAGAAAAATATACCCTATAAAACAACTAAAAATGGAATAAATCA  650

seq1  ATAAATTACTCAAATATAAATGATCATTACTGATCATTCACATGTAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTACTCAAATATAAATGATCATTACTGATCATTCACATGTAACAG  700

seq1  AAAAAATAATAGTAATTAGATTATAATCTGCTACTTTATAAAATCATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAATAGTAATTAGATTATAATCTGCTACTTTATAAAATCATTGA  750

seq1  AACAGTATATTTCAAAACATGAGTATTCATGTAAAATGAGGCAGAGATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATATTTCAAAACATGAGTATTCATGTAAAATGAGGCAGAGATCA  800

seq1  TATAGTATCCATGGTTATACGGTTTCTTTTATTCATTAACTGAAAGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTATCCATGGTTATACGGTTTCTTTTATTCATTAACTGAAAGAAAT  850

seq1  TCTTAGGAACAATTTCTATTGCAGAGTTTTTCTAGCCATATGTCAGGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTTAGGAACAATTTCTATTGCAGAGTTTTTCTAGCCATATGTCA-GTCT  899

seq1  AGATTATTCCTGGTTTTACAGCCATCACATGACATATAATTTCACTTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTCCTGGTTTTACAGCCATCACATGACATATAATTTCACTTCAA  949

seq1  ATTTCCTGTTTTTTTTTTCCTTCCATATTGTCTCTATCAGCAATTCATG-  999
      |||||||||||||||||  | |||||||||||||||||||| ||||||| 
seq2  ATTTCCTGTTTTTTTTT--CCTCCATATTGTCTCTATCAGC-ATTCATGT  996

seq1  TTTCTTTGTTTTGTTCAGGACAGAAGGTTACCTCTGACATTGAAAGAGCA  1049
      |||||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  TTTCTTTG-TTTGTTCAGGACAGAAGGTTACCTCTGACATTGAAGGAGCA  1045

seq1  ACACCTGTACATTCCAATGAGCACAAAAATATGCCATTGA  1089
       || |||||||||||||||||||||||||||   ||||||
seq2  CCA-CTGTACATTCCAATGAGCACAAAAATAGTGCATTGA  1084

seq1: chr6_130664199_130665304
seq2: B6Ng01-005K23.g_68_1171 (reverse)

seq1  TAAAATGCATAGAATATGGAATTAAATAAATGTG--TATCACTAAAATAT  48
      |||| |||| |||||||| | |||||||||||||  |  ||||||||| |
seq2  TAAAGTGCA-AGAATATGAATTTAAATAAATGTGGTTTCCACTAAAATCT  49

seq1  GTTTTTCCCTAAACTGCTAAAGTATTGTCTTAGGCCAGTGGCTTAAATGG  98
      ||||| ||   |||||||||||||||||||  | ||||||||| || || 
seq2  GTTTTACC--TAACTGCTAAAGTATTGTCTAGGCCCAGTGGCTAAATTGA  97

seq1  GTTGAGACTGTTGACACCAAACCT-GAGGAGCTCAGTTTAGCCCTCAGAT  147
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTTGAGACTGTTGACACCAAACCTGGAGGAGCTCAGTTTAGCCCTCAGAT  147

seq1  GCCTCATAATTAAAGGAGAGATTTAATTCTTTTCAGATGTCCACTAATTG  197
      ||||||  | |||| |||| |||| |||||||||||||||||||||||||
seq2  GCCTCAATAATAAA-GAGAAATTT-ATTCTTTTCAGATGTCCACTAATTG  195

seq1  CTCTGTTGCTGTGGGACCTGTATATGTGCATGCAAATTAATCCACCCAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGCTGTGGGACCTGTATATGTGCATGCAAATTAATCCACCCAAA  245

seq1  AATACATTAACATAGTAACAAAAAATATTGTCTCTGATAACAGCTCAACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTAACATAGTAACAAAAAATATTGTCTCTGATAACAGCTCAACA  295

seq1  CATTATGCTTTTCATACCAGTATCTTTATCCAGCAAGTAGAATTTTTTTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGCTTTTCATACCAGTATCTTTATCCAGCAAGTAGAATTTTTTTC  345

seq1  CATCATTGCTGAAATAATAAGCAATAGTTTTATACTGAAAATGCTCTCAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGCTGAAATAATAAGCAATAGTTTTATACTGAAAATGCTCTCAT  395

seq1  ATTATACTTTGAGCAATGACAATAGATTTAAAGGAAGAAATAAATGTATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTTTGAGCAATGACAATAGATTTAAAGGAAGAAATAAATGTATG  445

seq1  TAAAATACAATACAAGGTCTCATATGCCTGCTTTTTATAGAGAAAAAGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACAATACAAGGTCTCATATGCCTGCTTTTTATAGAGAAAAAGGT  495

seq1  GTGTAATAAAGGTACAAATGATGGTTTATGAACACAGTTTGTTTGGTTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATAAAGGTACAAATGATGGTTTATGAACACAGTTTGTTTGGTTGG  545

seq1  TTTTTTGTCTTTTTCTTCTTAACGTCAAAGCTAAAAGTTATTCATTGAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTCTTTTTCTTCTTAACGTCAAAGCTAAAAGTTATTCATTGAAA  595

seq1  CATGGTGATTGAAAGACTTCCCTGTATTCAACACACTGCAGTCTCTGCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGATTGAAAGACTTCCCTGTATTCAACACACTGCAGTCTCTGCTG  645

seq1  TATTGTTTATTAGGTGTCCCAAATCTACATTGCTGTGAAAATAATTTTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTATTAGGTGTCCCAAATCTACATTGCTGTGAAAATAATTTTAA  695

seq1  AAGTTGAATAGAATATAAATCAAAGGAAAGGTGATACATATCTATAAACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAATAGAATATAAATCAAAGGAAAGGTGATACATATCTATAAACT  745

seq1  CATCCTTTGAGAGGAAAAATGGGTGATAAGATTTTGGGAGTCTGAATTAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTGAGAGGAAAAATGGGTGATAAGATTTTGGGAGTCTGAATTAG  795

seq1  CAGGATAAAAAACCAGTTCTGACTTGGCTTAGGAACAGGTATCTGATCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAAAAAACCAGTTCTGACTTGGCTTAGGAACAGGTATCTGATCAA  845

seq1  ATAATAACTAATAATTAAAAGTTTCTTCAATATATGTGGGAAAGGAAGAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAACTAATAATTAAAAGTTTCTTCAATATATGTGGGAAAGGAAGAC  895

seq1  AATTCCTTTATAGACCAGGGTTCAATAGAGGTAAGACTCTGAAATAATTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTTTATAGACCAGGGTTCAATAGAGGTAAGACTCTGAAATAATTA  945

seq1  GCATAATGTGTCAGCCAGTCTTTTTCATAATAGGCAGGGAAAGATGAATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAATGTGTCAGCCAGTCTTTTTCATAATAGGCAGGGAAAGATGAATA  995

seq1  GTGAATCTATGAAAAATGATCAAATCTTAAATTATTAATGTGGATAAATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATCTATGAAAAATGATCAAATCTTAAATTATTAATGTGGATAAATA  1045

seq1  CAAGTATGGACAAATGTAGCTTCAGAATTTGGGACAAAGAGGCAAGAATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATGGACAAATGTAGCTTCAGAATTTGGGACAAAGAGGCAAGAATT  1095

seq1  CAGGAATTC  1106
      |||||||||
seq2  CAGGAATTC  1104