BAC Information

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BAC

Clone NameB6Ng01-007B24
Chromosome6 (Build37)
Map Location 63,701,598 - 63,861,101
singlet/doubletdoublet
Overlap geneGrid2
Upstream geneGA_x5J8B7W6GG0-4757855-4757501, LOC667099
Downstream geneAtoh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007B24.bB6Ng01-007B24.g
ACCDH843791DH843792
length388968
definitionDH843791|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B24, 5' end.DH843792|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,860,708 - 63,861,101)(63,701,598 - 63,702,566)
sequence
ttcatgggggtggggggtatttattctcatttgatcatatcttgctcctg
tcacttctgctactctcaaaaataaggggacaacaatgatcaatgagctt
tagactccttaggaaatgaagatcttcaaaacagaatgaaaaaaacatta
ttttctcttgatatgttatcacatgtaaagattctgaggcaaatgtattt
ttgctcacactacagtgcactctaggaagctgtgtgatatagtaaaagag
tgtagaaatattggctcatagtagtttgcagtttttgtaaaataaaactt
gcagagaatattttctacttccatcagctacaatgggtagacattcagta
aataggtgtctaatcaattatgtctgaattttttttaa
gaattcagaaagtgtccatgcaacaggaagtgttagaatgacacataaaa
ctgaagaacaaatatttagcctaattttatctgacctacattacaacaaa
ggaataagtagaaatttggtatttcttagggtttggagctggaagattga
tattttacttagcagtaatatcttttaaaagatagtttaaatttttctaa
taaacaaaactagaaagaagtatgaaatatattttctttatatttgttga
aagtagacatttgaattataaatatagacttcaaaaagccaatataccta
ttatattttcagttttcattatgtactggtaatgttctgataaaacattc
catttactaaggattactgcacactgagccaaatcatagctcaataataa
ttctcaagaattgtccctactctatttgtctttgtgaaattaatagatgt
gggtaagtcaggtagttagtttacattgaccttctttcaaaaaaaaagtt
gagaatttttgttttgaaatagtctcattaagtgatgctactccatatag
gagtcatcaggaactgaactctacagcatagtctggttaaaattaaatat
taagtgatacaagatagaacaagagccagctgcattttatctatatttgt
gaataaaaatattttaagacctaattgggttttgcataattatgtgtgtg
cattttctatttttataaagaattttaatgatatttattgattgagaaat
tcccatattgtttttagttagatttaataccctccatcacctactctcag
atccacaactacctactcatttcttctttctctctttcacaacctatcca
gttcagtttgggttggactactatattacttcttatgaaaaagtctttct
ctagaatgtgggtgatatagcagtgtcacataaataagaagagtcacttt
cattcttcttaggagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_63860708_63861101
seq2: B6Ng01-007B24.b_45_438 (reverse)

seq1  TTAAAAAAAATTCTGACATACTTGTTTAGACACCTATTTACTGAATGTCT  50
      ||||||||||||| |||||| ||| |||||||||||||||||||||||||
seq2  TTAAAAAAAATTCAGACATAATTGATTAGACACCTATTTACTGAATGTCT  50

seq1  ACCCATTGTAGCTGATGGAAGTAGAAAATATTCTCTGCAAGTTTTATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTGTAGCTGATGGAAGTAGAAAATATTCTCTGCAAGTTTTATTTT  100

seq1  ACAAAAACTGCAAACTACTATGAGCCAATATTTCTACACTCTTTTACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACTGCAAACTACTATGAGCCAATATTTCTACACTCTTTTACTAT  150

seq1  ATCACACAGCTTCCTAGAGTGCACTGTAGTGTGAGCAAAAATACATTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACAGCTTCCTAGAGTGCACTGTAGTGTGAGCAAAAATACATTTGC  200

seq1  CTCAGAATCTTTACATGTGATAACATATCAAGAGAAAATAATGTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATCTTTACATGTGATAACATATCAAGAGAAAATAATGTTTTTTT  250

seq1  CATTCTGTTTTGAAGATCTTCATTTCCTAAGGAGTCTAAAGCTCATTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTTTTGAAGATCTTCATTTCCTAAGGAGTCTAAAGCTCATTGAT  300

seq1  CATTGTTGTCCCCTTATTTTTGAGAGTAGCAGAAGTGACAGGAGCAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTGTCCCCTTATTTTTGAGAGTAGCAGAAGTGACAGGAGCAAGAT  350

seq1  ATGATCAAATGAGAATAAATACCCCCCACCCCCATGAAGAATTC  394
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAAATGAGAATAAATACCCCCCACCCCCATGAAGAATTC  394

seq1: chr6_63701598_63702566
seq2: B6Ng01-007B24.g_67_1034

seq1  GAATTCAGAAAGTGTCCATGCAACAGGAAGTGTTAGAATGACACATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAGTGTCCATGCAACAGGAAGTGTTAGAATGACACATAAAA  50

seq1  CTGAAGAACAAATATTTAGCCTAATTTTATCTGACCTACATTACAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAACAAATATTTAGCCTAATTTTATCTGACCTACATTACAACAAA  100

seq1  GGAATAAGTAGAAATTTGGTATTTCTTAGGGTTTGGAGCTGGAAGATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAGTAGAAATTTGGTATTTCTTAGGGTTTGGAGCTGGAAGATTGA  150

seq1  TATTTTACTTAGCAGTAATATCTTTTAAAAGATAGTTTAAATTTTTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACTTAGCAGTAATATCTTTTAAAAGATAGTTTAAATTTTTCTAA  200

seq1  TAAACAAAACTAGAAAGAAGTATGAAATATATTTTCTTTATATTTGTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAACTAGAAAGAAGTATGAAATATATTTTCTTTATATTTGTTGA  250

seq1  AAGTAGACATTTGAATTATAAATATAGACTTCAAAAAGCCAATATACCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGACATTTGAATTATAAATATAGACTTCAAAAAGCCAATATACCTA  300

seq1  TTATATTTTCAGTTTTCATTATGTACTGGTAATGTTCTGATAAAACATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTCAGTTTTCATTATGTACTGGTAATGTTCTGATAAAACATTC  350

seq1  CATTTACTAAGGATTACTGCACACTGAGCCAAATCATAGCTCAATAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACTAAGGATTACTGCACACTGAGCCAAATCATAGCTCAATAATAA  400

seq1  TTCTCAAGAATTGTCCCTACTCTATTTGTCTTTGTGAAATTAATAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGAATTGTCCCTACTCTATTTGTCTTTGTGAAATTAATAGATGT  450

seq1  GGGTAAGTCAGGTAGTTAGTTTACATTGACCTTCTTTCAAAAAAAAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGTCAGGTAGTTAGTTTACATTGACCTTCTTTCAAAAAAAAAGTT  500

seq1  GAGAATTTTTGTTTTGAAATAGTCTCATTAAGTGATGCTACTCCATATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTTTGTTTTGAAATAGTCTCATTAAGTGATGCTACTCCATATAG  550

seq1  GAGTCATCAGGAACTGAACTCTACAGCATAGTCTGGTTAAAATTAAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATCAGGAACTGAACTCTACAGCATAGTCTGGTTAAAATTAAATAT  600

seq1  TAAGTGATACAAGATAGAACAAGAGCCAGCTGCATTTTATCTATA-TTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAAGTGATACAAGATAGAACAAGAGCCAGCTGCATTTTATCTATATTTGT  650

seq1  GAATAAAAATATTTTAAGACCTAATTGGGTTTTGCATAATTATGTGTGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAATATTTTAAGACCTAATTGGGTTTTGCATAATTATGTGTGTG  700

seq1  CATTTTCTATTTTTATAAAGAATTTTAATGATTATTATTGATTGAGAAAT  749
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  CATTTTCTATTTTTATAAAGAATTTTAATGATATTTATTGATTGAGAAAT  750

seq1  TCCCATATTGTTTTTAGTTTAGATTTAATACCCTCCATCACCTACTCTCA  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCCATATTGTTTTTAG-TTAGATTTAATACCCTCCATCACCTACTCTCA  799

seq1  GATCCACAACTACCTACTCAATTTCTTCTTTCTCTCTTTCACAACCTATC  849
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GATCCACAACTACCTACTC-ATTTCTTCTTTCTCTCTTTCACAACCTATC  848

seq1  CAGTTCAGTTTGGGTTGGACTACTATATTAC-TCCTATGAAAAAGACCTT  898
      ||||||||||||||||||||||||||||||| || |||||||||| | ||
seq2  CAGTTCAGTTTGGGTTGGACTACTATATTACTTCTTATGAAAAAGTCTTT  898

seq1  CTCTAGAATGTGGGTGATATAGCAGGTGTCACACAATTAAGGAAGAGTCA  948
      |||||||||||||||||||||||| |||||||| || ||| |||||||||
seq2  CTCTAGAATGTGGGTGATATAGCA-GTGTCACATAAATAA-GAAGAGTCA  946

seq1  CTTTCATTC-TCCTAGGAGCAG  969
      ||||||||| || |||||||||
seq2  CTTTCATTCTTCTTAGGAGCAG  968