BAC Information

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BAC

Clone NameB6Ng01-007E08
Chromosome6 (Build37)
Map Location 109,159,549 - 109,160,507
singlet/doubletsinglet
Overlap geneLOC639110
Upstream geneItpr1, LOC677205, Bhlhb2, Arl8b, Edem1, EG627371
Downstream geneLOC100043720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007E08.bB6Ng01-007E08.g
ACCDH843896DH843897
length957471
definitionDH843896|Mus musculus domesticus DNA, BAC clone: B6Ng01-007E08, 5' end.DH843897|Mus musculus domesticus DNA, BAC clone: B6Ng01-007E08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctttccattttctgagtcacagaagcttgcatatgaattcct
tgagcgatcttctggaaaattatatattattgataaagctttggcatggg
atattgagttaggtctattcttgcatttcgctgagctcctaattaagcta
gtttatatgaaagaactgatgtacgagacttggagttgaatgtattgatt
tgcatattgattttccttgaatctggtgcttgcctctgtatatcacacca
gaacagactctgctgtgttttgataagaaagataattcaggcggttgggt
ttatggcttaggctgttaaactgcaaaataaagtgaaacttgtcaaccat
ttccttttacagctttgggaagaagggttcagactgaagttaaagtgact
cagctgcatgtttacaggatctgtttgtttaccttggattaaacagcagt
tttaatctttaaattatcctcacagagttccacagcactgtgtctcacca
atatacccagactctcctgggcagtttgttctaacaggttactggacctc
ctcccaatctttcttacccactttgtggaggtaggtcttcatacacacac
ttccacgtgatatggcttcttgcactggtggagagttcagagtttgagat
tgctgttcttaagtggtctatagtctgtgtcatggcacccaattgctgtg
tatatagtatacacaattgctgtgtatagttgatggggaaatggtgagta
ctgttttgacatcttacttagaagtttctttcttcatagatacactagaa
tagctgctaaacactagctctctatcattaaattatttaactagcataca
aaaatggtttatttgggcatttaataccgttgtgcatttacatgttccct
ctcctcaaaaaactcaaactcatggtttcatttggagttatgggctctaa
tagcaat

aaggcacacgcctaaacatagtaaaagcaataaacagcaaaccagtagcc
aacatcaaatctaaatggagagaaacttgacacagtcccacaagaatcaa
gtagtatagaaggctttacactctctccctgttaaatatacgacttgagt
ttctagctaaatcaattggacaatgaaaggaggtcaaagggatacaaatt
agaaagaaagaagtcaaaatatcactgtttgcagataatatgatagtata
cctaagtgaccccaaaaattccaccagagagctcctacacgtgataaaca
acttcagcaatgtggctggatataaaattaactcatggctccagctgaat
aaggatcaaaggatggccttgtcagtcatcagtggcgaatgaggcccttg
atcttgtgaaggttctatgccccagtgtaggggaataccagggccaggaa
gtgggagtgggtgggttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109159549_109160507
seq2: B6Ng01-007E08.b_49_1005

seq1  GAATTCACCTTTCCATTTTCTGAGTCACAGAAGCTTGCATATGAATTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTTCCATTTTCTGAGTCACAGAAGCTTGCATATGAATTCCT  50

seq1  TGAGCGATCTTCTGGAAAATTATATATTATTGATAAAGCTTTGGCATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGATCTTCTGGAAAATTATATATTATTGATAAAGCTTTGGCATGGG  100

seq1  ATATTGAGTTAGGTCTATTCTTGCATTTCGCTGAGCTCCTAATTAAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAGTTAGGTCTATTCTTGCATTTCGCTGAGCTCCTAATTAAGCTA  150

seq1  GTTTATATGAAAGAACTGATGTACGAGACTTGGAGTTGAATGTATTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATGAAAGAACTGATGTACGAGACTTGGAGTTGAATGTATTGATT  200

seq1  TGCATATTGATTTTCCTTGAATCTGGTGCTTGCCTCTGTATATCACACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATTGATTTTCCTTGAATCTGGTGCTTGCCTCTGTATATCACACCA  250

seq1  GAACAGACTCTGCTGTGTTTTGATAAGAAAGATAATTCAGGCGGTTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGACTCTGCTGTGTTTTGATAAGAAAGATAATTCAGGCGGTTGGGT  300

seq1  TTATGGCTTAGGCTGTTAAACTGCAAAATAAAGTGAAACTTGTCAACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTTAGGCTGTTAAACTGCAAAATAAAGTGAAACTTGTCAACCAT  350

seq1  TTCCTTTTACAGCTTTGGGAAGAAGGGTTCAGACTGAAGTTAAAGTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTACAGCTTTGGGAAGAAGGGTTCAGACTGAAGTTAAAGTGACT  400

seq1  CAGCTGCATGTTTACAGGATCTGTTTGTTTACCTTGGATTAAACAGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCATGTTTACAGGATCTGTTTGTTTACCTTGGATTAAACAGCAGT  450

seq1  TTTAATCTTTAAATTATCCTCACAGAGTTCCACAGCACTGTGTCTCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTTTAAATTATCCTCACAGAGTTCCACAGCACTGTGTCTCACCA  500

seq1  ATATACCCAGACTCTCCTGGGCAGTTTGTTCTAACAGGTTACTGGACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCCAGACTCTCCTGGGCAGTTTGTTCTAACAGGTTACTGGACCTC  550

seq1  CTCCCAATCTTTCTTACCCACTTTGTGGAGGTAGGTCTTCATACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATCTTTCTTACCCACTTTGTGGAGGTAGGTCTTCATACACACAC  600

seq1  TTCCACGTGATATGGCTTCTTGCACTGGTGGAGAGTTCAGAGTTTGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACGTGATATGGCTTCTTGCACTGGTGGAGAGTTCAGAGTTTGAGAT  650

seq1  TGCTGTTCTTAAGTGGTCTATAGTCTGTGTCATGGCACCCAATTGCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCTTAAGTGGTCTATAGTCTGTGTCATGGCACCCAATTGCTGTG  700

seq1  TATATAGTATACACAATTGCTGTGTATAGTTGATGGGGAAATGGTGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTATACACAATTGCTGTGTATAGTTGATGGGGAAATGGTGAGTA  750

seq1  CTGTTTTGACATCTTACTTAGAAGTTTCTTTCTTCATAGATACACTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGACATCTTACTTAGAAGTTTCTTTCTTCATAGATACACTAGAA  800

seq1  TAGCTGCTAAACACTAGCTCTCTATCATTAAATTATTTAACTAGCATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTAAACACTAGCTCTCTATCATTAAATTATTTAACTAGCATACA  850

seq1  AAAATGGGTTTTATTGTGGCATTTTAATACCGTTGTGCATTTACATGTTC  900
      |||||||  ||||||  |||| ||||||||||||||||||||||||||||
seq2  AAAATGG--TTTATTTGGGCA-TTTAATACCGTTGTGCATTTACATGTTC  897

seq1  ACTCT-CTCAAAATACTCTAAACTCATGGTTTCATTTGGAGTTATGGGCT  949
       |||| ||||||| |||| |||||||||||||||||||||||||||||||
seq2  CCTCTCCTCAAAAAACTC-AAACTCATGGTTTCATTTGGAGTTATGGGCT  946

seq1  CT-ATAGCAAT  959
      || ||||||||
seq2  CTAATAGCAAT  957


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