BAC Information

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BAC

Clone NameB6Ng01-007I14
Chromosome6 (Build37)
Map Location 10,319,937 - 10,321,090
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007I14.bB6Ng01-007I14.g
ACCDH844075DH844076
length1,1501,146
definitionDH844075|Mus musculus domesticus DNA, BAC clone: B6Ng01-007I14, 5' end.DH844076|Mus musculus domesticus DNA, BAC clone: B6Ng01-007I14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactactagaaaatccagcaatacctctcctgtgc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatggagactgaagtgtggacactatgccgctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggaagcagatgtagctgtctcttgtgagactatgccggggctcagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tggaggagctagagaaagtagccaggagctaaagggatctgcaaccctat
agtggaacaacttatgagctaccagtaccccgagcttcttgactctagct
gcatataatcaaagatgcctagtcgcatcactgaagaagccatgacctgc
actttatgccataaggactcaggccaaagggatggtgggcatggatgggg

gaattctttatacatctttaaattttattttacttacaggatttctgact
gtggacaaaaatctcaagaattacttagagaacaaatgcaactcttttag
aattttttcttcactatccaagaattttttctagcagcttttctgacttc
agtcagaaagctcatgagctatctagagagctttaatatttttttttcta
gctagagaggcacacaacctgagtttgaagcatttgtttcaccattctca
aacacgcctttgtggcaattcttcttaattgtgggtgatttcacctttcc
caagctgaaataatttccaaattttggtcacacatctaagtggttcttcc
ttaaatagataaataaataaatagacaatgtcaatgtctttaaatagcta
taaagtgcttcataatttctaaggcaaatatttttaaaaggaaaaaagat
aatgtataaaatatagactttggaagactgatattcttgactatgttttc
tcattagttggttatatgaattatagaaaactaatctaggccctaaattt
tcctacaatcaaatgaagataatattatttgcatggacttagtgttcaca
gcttcacatgatatataaaacagtatttagaatgtattatatgcccaatg
taagcacagttagaagctttcaagtttgatgaaaacattaaatatattta
tccagagcagctaaattgacacacttaacaaaatactaaatctttaaaaa
tatacaactttccatatcaacctttatctgagaataaattattatgatga
aagaatgaaaaccataaatatatgtgtgcatatgtatattgtatgtgtca
ctgtgcataaaaacatgcccacatatacattacactttttctgtagtcat
taattgacatgctctcctaaataatctaaataataaaacctaaaattgaa
agcattaagtatcatgtaggcatttaaatgttgttgctttcataataaga
catgttgttaatagttcatatttatgattcttatactttagaagaagaaa
ccttatttgactacacttttaaaatttactgaacatgtttgttctagtca
ggtttccatattcctgcacaaccattcatgacaaaagcctagttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10319937_10321090
seq2: B6Ng01-007I14.g_68_1213 (reverse)

seq1  TCAACTAGCTTCTTGGTCATG-ATGTTTGTGCAGGAATA-GAAACCCTGA  48
      ||||||||  | || |||||| ||| ||||||||||||| | || |||||
seq2  TCAACTAGGCT-TTTGTCATGAATGGTTGTGCAGGAATATGGAAACCTGA  49

seq1  CTAAGACAAACATGTTCAGTAATATTTTTAAAAAGTGTAGTTCAAATAAG  98
      |||  ||||||||||||||||| |||||  |||||||||| |||||||||
seq2  CTAGAACAAACATGTTCAGTAA-ATTTT--AAAAGTGTAG-TCAAATAAG  95

seq1  GTGTCTTCTTCCTAAAGGTATAAG-ATCATAAATATGAACTATTAACACA  147
      || ||||||| ||||| ||||||| |||||||||||||||||||||||  
seq2  GTTTCTTCTT-CTAAA-GTATAAGAATCATAAATATGAACTATTAACAAC  143

seq1  TTGTCTTAATTTATTGAAAGCAAC-ACATTTAAATGCCTACATTGATACT  196
       |||||||  ||| |||||||||| ||||||||||||||||| |||||||
seq2  ATGTCTTA--TTA-TGAAAGCAACAACATTTAAATGCCTACA-TGATACT  189

seq1  TAATGCTTTCAATTTTAGGTTTTTATTATTTAGATTATTTAGGAGAGCAT  246
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAATGCTTTCAATTTTAGG-TTTTATTATTTAGATTATTTAGGAGAGCAT  238

seq1  GTCAATTAATGACTACAGAAAAAGTGTAATGTATATGTGGGCATGTTTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTAATGACTACAGAAAAAGTGTAATGTATATGTGGGCATGTTTTT  288

seq1  ATGCACAGTGACACATACAATATACATATGCACACATATATTTATGGTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAGTGACACATACAATATACATATGCACACATATATTTATGGTTT  338

seq1  TCATTCTTTCATCATAATAATTTATTCTCAGATAAAGGTTGATATGGAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTTCATCATAATAATTTATTCTCAGATAAAGGTTGATATGGAAA  388

seq1  GTTGTATATTTTTAAAGATTTAGTATTTTGTTAAGTGTGTCAATTTAGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATATTTTTAAAGATTTAGTATTTTGTTAAGTGTGTCAATTTAGCT  438

seq1  GCTCTGGATAAATATATTTAATGTTTTCATCAAACTTGAAAGCTTCTAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGATAAATATATTTAATGTTTTCATCAAACTTGAAAGCTTCTAAC  488

seq1  TGTGCTTACATTGGGCATATAATACATTCTAAATACTGTTTTATATATCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTACATTGGGCATATAATACATTCTAAATACTGTTTTATATATCA  538

seq1  TGTGAAGCTGTGAACACTAAGTCCATGCAAATAATATTATCTTCATTTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGCTGTGAACACTAAGTCCATGCAAATAATATTATCTTCATTTGA  588

seq1  TTGTAGGAAAATTTAGGGCCTAGATTAGTTTTCTATAATTCATATAACCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGAAAATTTAGGGCCTAGATTAGTTTTCTATAATTCATATAACCA  638

seq1  ACTAATGAGAAAACATAGTCAAGAATATCAGTCTTCCAAAGTCTATATTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGAGAAAACATAGTCAAGAATATCAGTCTTCCAAAGTCTATATTT  688

seq1  TATACATTATCTTTTTTCCTTTTAAAAATATTTGCCTTAGAAATTATGAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTATCTTTTTTCCTTTTAAAAATATTTGCCTTAGAAATTATGAA  738

seq1  GCACTTTATAGCTATTTAAAGACATTGACATTGTCTATTTATTTATTTAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTATAGCTATTTAAAGACATTGACATTGTCTATTTATTTATTTAT  788

seq1  CTATTTAAGGAAGAACCACTTAGATGTGTGACCAAAATTTGGAAATTATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAAGGAAGAACCACTTAGATGTGTGACCAAAATTTGGAAATTATT  838

seq1  TCAGCTTGGGAAAGGTGAAATCACCCACAATTAAGAAGAATTGCCACAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTGGGAAAGGTGAAATCACCCACAATTAAGAAGAATTGCCACAAA  888

seq1  GGCGTGTTTGAGAATGGTGAAACAAATGCTTCAAACTCAGGTTGTGTGCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGTTTGAGAATGGTGAAACAAATGCTTCAAACTCAGGTTGTGTGCC  938

seq1  TCTCTAGCTAGAAAAAAAAATATTAAAGCTCTCTAGATAGCTCATGAGCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCTAGAAAAAAAAATATTAAAGCTCTCTAGATAGCTCATGAGCT  988

seq1  TTCTGACTGAAGTCAGAAAAGCTGCTAGAAAAAATTCTTGGATAGTGAAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGAAGTCAGAAAAGCTGCTAGAAAAAATTCTTGGATAGTGAAG  1038

seq1  AAAAAATTCTAAAAGAGTTGCATTTGTTCTCTAAGTAATTCTTGAGATTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTCTAAAAGAGTTGCATTTGTTCTCTAAGTAATTCTTGAGATTT  1088

seq1  TTGTCCACAGTCAGAAATCCTGTAAGTAAAATAAAATTTAAAGATGTATA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCACAGTCAGAAATCCTGTAAGTAAAATAAAATTTAAAGATGTATA  1138

seq1  AAGAATTC  1154
      ||||||||
seq2  AAGAATTC  1146