BAC Information

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BAC

Clone NameB6Ng01-008C10
Chromosome6 (Build37)
Map Location 92,145,449 - 92,220,233
singlet/doubletdoublet
Overlap geneZfyve20, Trh
Upstream geneFbln2, LOC665716, Wnt7a, LOC100043659, LOC625420, Chchd4, Tmem43, Xpc, Lsm3, Slc6a6, Grip2, C130022K22Rik, 4930590J08Rik, Fgd5, Nr2c2, Mrps25
Downstream geneLOC665805, Prickle2, LOC545866, A730049H05Rik, LOC384461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008C10.bB6Ng01-008C10.g
ACCDH844506DH844507
length2341,084
definitionDH844506|Mus musculus domesticus DNA, BAC clone: B6Ng01-008C10, 5' end.DH844507|Mus musculus domesticus DNA, BAC clone: B6Ng01-008C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,145,449 - 92,145,682)(92,219,134 - 92,220,233)
sequence
aatacagtagctacatcatctttcaaccacaaaatttacaaaaaacagga
gactagaagtaagagccaggtggtggtggtgcactcctttagtcccagaa
ctcgggagacagaggcaagttgatctctgagttcaaggtctgcctgttct
acagagcaagatccaggtcagccagggctacacagagaaaccgtgtcttg
aagaaacgaagaaaaagggggggtggggggtggg
gaattctttgacccaatgttctggtgctatttgggcctcttcccagtcct
ggtcatgatataaggacagagtgtcctctgaggattggagtccctgatcc
aaagtagggtcagggaactgcgaggtgggtgagaatgggaggtccttccc
tcagcagtataggataggccaggggtgggccaggaaagcaggagagtagc
aagccacttcgagctcttcctgcacacgttctgatggagagccttaaaga
ggccagcagttctggctctcagcctggccttccagcaattctgcagctca
gaccaccaaacaaaggaccagaaactgcatggcttaagccccaacccatc
gtctcacaaatctgggcattggcaagaatagggaatcagggcccaagctg
ggcttcttctttccagaccccaaaggaagggtaagcacaaggagctgcca
gaacccaggagtggtctttttcagccctgcatgctacttactaggcgttg
ggtccatgcagcccatttcctcttctggatttgttggtctgaaaaaaatg
gaggactcggtcccagaattccaatactggctgctgttgctctgccaact
gcctcttcaacatcctatctcgcttagaagctgtatgtgaactcagaaac
gtcagctagacttctgtccatttctgagcacggagctgccttttccctca
tgacaaagatatgttgggacccttgaacggtctgtcttgaaaatctaagc
tccaggcatggatacatacgtgctcagactatccaccacatttaccatgt
ttgacttcctgggttccaggtcgatacaaactaaccaggcaaacaaaaca
aacaaagccgaggtttgtagggatacctctagaggtggagcagaattacc
agagttagcaaggaagacacagggcatcccgtgtggccattgcctgaacc
tgctcttttatatggggaggagctggattagatgcgttttcatgcatttt
gttgttggcacggagggcagcagacttcataaatgtctggatgttgtaca
ggtgtggaacagagattcagaacaggattttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_92145449_92145682
seq2: B6Ng01-008C10.b_50_283

seq1  AATACAGTAGCTACATCATCTTTCAACCACAAAATTTACAAAAAACAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGTAGCTACATCATCTTTCAACCACAAAATTTACAAAAAACAGGA  50

seq1  GACTAGAAGTAAGAGCCAGGTGGTGGTGGTGCACTCCTTTAGTCCCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAAGTAAGAGCCAGGTGGTGGTGGTGCACTCCTTTAGTCCCAGAA  100

seq1  CTCGGGAGACAGAGGCAAGTTGATCTCTGAGTTCAAGGTCTGCCTGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGAGACAGAGGCAAGTTGATCTCTGAGTTCAAGGTCTGCCTGTTCT  150

seq1  ACAGAGCAAGATCCAGGTCAGCCAGGGCTACACAGAGAAACCGTGTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAAGATCCAGGTCAGCCAGGGCTACACAGAGAAACCGTGTCTTG  200

seq1  AAGAAACGAAGAAAAAGGGGGGGTGGGGGGTGGG  234
      ||||||||||||||||||||||||||||||||||
seq2  AAGAAACGAAGAAAAAGGGGGGGTGGGGGGTGGG  234

seq1: chr6_92219134_92220233
seq2: B6Ng01-008C10.g_70_1153 (reverse)

seq1  CCCAAAGTCCTGTTCTGAATCCTCTGTGTCCCACAACCTGTAACAACACT  50
      |||||| ||||||||||||   ||| ||| |||| |||||| |||||| |
seq2  CCCAAAATCCTGTTCTGAA---TCTCTGTTCCAC-ACCTGT-ACAACA-T  44

seq1  CAGGACATTTATGTAGCTCTGCTGCCCTCCGGTGGCCAACAACAGAAATG  100
      |  |||||||||| || ||||||||||||||   |||||||||| |||||
seq2  CCAGACATTTATGAAG-TCTGCTGCCCTCCG--TGCCAACAACA-AAATG  90

seq1  CATGAAAACGCATCCTGAATCCCAGCTCCTCCCCATATAAAAGGAGCAGG  150
      ||||||||||||||   ||| ||||||||||||||||||||| |||||||
seq2  CATGAAAACGCATC--TAAT-CCAGCTCCTCCCCATATAAAA-GAGCAGG  136

seq1  TTCAGGCAATGGCCACACTGGATGCCCTGTGGTCTTCCTTGCTAACTCTG  200
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  TTCAGGCAATGGCCACACGGGATGCCCTGT-GTCTTCCTTGCTAACTCTG  185

seq1  GTAATTCTGCTCCACCTCTAGAGGTATCCCTACAAACCTCGGCTTTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTGCTCCACCTCTAGAGGTATCCCTACAAACCTCGGCTTTGTTT  235

seq1  GTTTTGTTTGCCTGGTTAGTTTGTATCGACCTTGGAACCCAGGAAGTCAA  300
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTTTTGTTTGCCTGGTTAGTTTGTATCGACC-TGGAACCCAGGAAGTCAA  284

seq1  ACATGGTAAATGTGGTGGATAGTCTGAGCACGTATGTATCCATGCCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTAAATGTGGTGGATAGTCTGAGCACGTATGTATCCATGCCTGGA  334

seq1  GCTTAGATTTTCAAGACAGACCGTTCAAGGGTCCCAACATATCTTTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGATTTTCAAGACAGACCGTTCAAGGGTCCCAACATATCTTTGTCA  384

seq1  TGAGGGAAAAGGCAGCTCCGTGCTCAGAAATGGACAGAAGTCTAGCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAAAAGGCAGCTCCGTGCTCAGAAATGGACAGAAGTCTAGCTGAC  434

seq1  GTTTCTGAGTTCACATACAGCTTCTAAGCGAGATAGGATGTTGAAGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGAGTTCACATACAGCTTCTAAGCGAGATAGGATGTTGAAGAGGC  484

seq1  AGTTGGCAGAGCAACAGCAGCCAGTATTGGAATTCTGGGACCGAGTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCAGAGCAACAGCAGCCAGTATTGGAATTCTGGGACCGAGTCCTC  534

seq1  CATTTTTTTCAGACCAACAAATCCAGAAGAGGAAATGGGCTGCATGGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTCAGACCAACAAATCCAGAAGAGGAAATGGGCTGCATGGACC  584

seq1  CAACGCCTAGTAAGTAGCATGCAGGGCTGAAAAAGACCACTCCTGGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCCTAGTAAGTAGCATGCAGGGCTGAAAAAGACCACTCCTGGGTTC  634

seq1  TGGCAGCTCCTTGTGCTTACCCTTCCTTTGGGGTCTGGAAAGAAGAAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTCCTTGTGCTTACCCTTCCTTTGGGGTCTGGAAAGAAGAAGCC  684

seq1  CAGCTTGGGCCCTGATTCCCTATTCTTGCCAATGCCCAGATTTGTGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGGGCCCTGATTCCCTATTCTTGCCAATGCCCAGATTTGTGAGAC  734

seq1  GATGGGTTGGGGCTTAAGCCATGCAGTTTCTGGTCCTTTGTTTGGTGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTTGGGGCTTAAGCCATGCAGTTTCTGGTCCTTTGTTTGGTGGTC  784

seq1  TGAGCTGCAGAATTGCTGGAAGGCCAGGCTGAGAGCCAGAACTGCTGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCAGAATTGCTGGAAGGCCAGGCTGAGAGCCAGAACTGCTGGCC  834

seq1  TCTTTAAGGCTCTCCATCAGAACGTGTGCAGGAAGAGCTCGAAGTGGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGGCTCTCCATCAGAACGTGTGCAGGAAGAGCTCGAAGTGGCTT  884

seq1  GCTACTCTCCTGCTTTCCTGGCCCACCCCTGGCCTATCCTATACTGCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTCTCCTGCTTTCCTGGCCCACCCCTGGCCTATCCTATACTGCTGA  934

seq1  GGGAAGGACCTCCCATTCTCACCCACCTCGCAGTTCCCTGACCCTACTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGACCTCCCATTCTCACCCACCTCGCAGTTCCCTGACCCTACTTT  984

seq1  GGATCAGGGACTCCAATCCTCAGAGGACACTCTGTCCTTATATCATGACC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGGGACTCCAATCCTCAGAGGACACTCTGTCCTTATATCATGACC  1034

seq1  AGGACTGGGAAGAGGCCCAAATAGCACCAGAACATTGGGTCAAAGAATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGGAAGAGGCCCAAATAGCACCAGAACATTGGGTCAAAGAATTC  1084