BAC Information

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BAC

Clone NameB6Ng01-008N16
Chromosome6 (Build37)15 (Build37)
Map Location 18,835,442 - 18,835,96889,927,628 - 89,927,991
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008N16.bB6Ng01-008N16.g
ACCDH844971DH844972
length942358
definitionDH844971|Mus musculus domesticus DNA, BAC clone: B6Ng01-008N16, 5' end.DH844972|Mus musculus domesticus DNA, BAC clone: B6Ng01-008N16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(89,927,628 - 89,927,991)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcaggacttgagtttttatcataca
gatctttcacttccttcgttagagtcacgccgagatatttta
ctgtaagatctgtaacccagctaggtagatgtcagactctaaacaagcaa
gcaagcaagcaagcaagcaagcaagcaagcaagcaagctcctttctcctg
aagagtccagggagtgagctcatggcggtgttctgatccccaagcacaga
agttgacccagccacacattgaatcattaaacatgtgaatgaagataact
gcacgcagttgtcacacaactctcaagcaatacccggatttaagggcttc
tgcaaatgaaatccagataatgtgcaactgacatagaattcagcaccatg
gcaactctctctctctctctctctctctctctctctctctctctctctct
ctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-008N16.b_47_574 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| |||||||||||||||||||| |||| ||
seq2  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr15_89927628_89927991
seq2: B6Ng01-008N16.g_68_431

seq1  GAATTCCTGTAAGATCTGTAACCCAGCTAGGTAGATGTCAGACTCTAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTAAGATCTGTAACCCAGCTAGGTAGATGTCAGACTCTAAAC  50

seq1  AAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCTCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCTCCTTT  100

seq1  CTCCTGAAGAGTCCAGGGAGTGAGCTCATGGCGGTGTTCTGATCCCCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAAGAGTCCAGGGAGTGAGCTCATGGCGGTGTTCTGATCCCCAAG  150

seq1  CACAGAAGTTGACCCAGCCACACATTGAATCATTAAACATGTGAATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGTTGACCCAGCCACACATTGAATCATTAAACATGTGAATGAAG  200

seq1  ATAACTGCACGCAGTTGTCACACAACTCTCAAGCAATACCCGGATTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGCACGCAGTTGTCACACAACTCTCAAGCAATACCCGGATTTAAG  250

seq1  GGCTTCTGCAAATGAAATCCAGATAATGTGCAACTGACATAGAATTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGCAAATGAAATCCAGATAATGTGCAACTGACATAGAATTCAGC  300

seq1  ACCATGGCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  350

seq1  CTCTCTCTTTCTCT  364
      |||||||| |||||
seq2  CTCTCTCTCTCTCT  364