BAC Information

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BAC

Clone NameB6Ng01-010E06
Chromosome6 (Build37)
Map Location 22,917,123 - 22,975,443
singlet/doubletdoublet
Overlap genePtprz1
Upstream geneIng3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948, LOC100040959, LOC668018, LOC668022
Downstream geneAass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2, Rnf133, Rnf148, Tas2r118
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010E06.bB6Ng01-010E06.g
ACCDH845983DH845984
length1,006985
definitionDH845983|Mus musculus domesticus DNA, BAC clone: B6Ng01-010E06, 5' end.DH845984|Mus musculus domesticus DNA, BAC clone: B6Ng01-010E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,917,123 - 22,918,141)(22,974,459 - 22,975,443)
sequence
gaattctattttgggctgttaagctattattataggaaatctttagattg
aaagtagttcttacccttagacaacaagactctagaagtgcactcagact
tcttagtcctgacccatgttctccatgtaaggagagttgtaaacaactca
atactataaacgtcatgcagaatataaaatcttcttactatatcgcgggc
tgattgctcatctacgtttctctcgaaaagagaaaccccacttcttgtcg
agaacctgttctccctgatcctcctttcatcatagctattctgtgctgct
ggacattgttgcatttgtagactgagaaatcggtggggactttgcagtga
tacaaagataaaatattagcattcttcaagcaggacacacagaaaagtat
tagtgaaatctttccaactgcaaagaagagatcagtgattctcaaatgga
aggtctcatcagaaatattttttctgcttgcacaattgcagactaggccc
agggatctgtatattaaaaactctttacaataacttctgaggtggctctg
tgcatgccattgttataagtactggttggttttaaattctcagcagcttt
cccttactgcttggttgtactgtggcccttggttatctgtctctctccct
cgttgttgtttttttttttttctttcattgtcaacctccgcacagaagga
tctagcaagttggttgatcatcaagtttgagggtttggggttgagatgaa
tgccagaggattagtggagtcctgttggtccaggtgtatgtctctcatgc
acttactcagatgaaattcatgattactttccaagtcacaaaatgtcacc
atagtccattttctcagtagatggtggcatgactgaaaaaaaagaacata
ttgaaattctattgcatatctaggacagatttttggacagcatgcaatac
aggtgtaaaaatacataaagttctagccctcagcaagaaataactgctac
cgagca
gaattccaagaaaggctggaagcaagcccaggtaggagcagaaagaagaa
gcccagagaatcttagctggtcaataaattcactaagaggtagcggatcc
tcagtagaagttggactgtgaactataaacaatgcctgaaaccacagtta
gagaaatacagactatgaggcccgaggaaagggctgaagatccttctgta
taaaagaaatcaatgccactgatgatagcatgtgcagaagtgaccctact
gcaatgctggtgttagcaggcagaagagtctctccctgatcacacaggcc
ttgagacaaccccactgaatccattggcagacagcgcaaggacaccggtt
gataggacagcaacaatgaggctgccgtcctcggagttaagaacgtactt
acaggctacgatattgacgtatctgttcttgtgcttgttgtctgggtgat
tggagctgtctgctgtgatgcctaagtcagcagtacagctctgcacttcc
tggaaaaaaagggcaggcattgccttttaacacaaattctttcaaaataa
gtgcctttaaatataaggaagacaaaactaatcaaatggtctagcaaaaa
aaaatgtatgtatgtatgtatatatatatatatatatatatatataaaca
catttacatgttacaactacttcttggctaaaaggaaatgcagtgaaata
atgccttacctggtaaaactctttcagtgtctaatgaggaaatgaatgcc
aaaaaagtaaagaaatcacattccacagcacacgacaaatgagaaaagaa
agtgttcatattaggtttacaatggaaaactatgatcatgcaataaatac
atttgtcacatactaacacaacagaatgtttcaaacagttgcacacaaat
caaatgccacataatttgggaactttaattatgtaaatgaataaaaccag
catgtttaaatggggatgaggatgtagtatgatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22917123_22918141
seq2: B6Ng01-010E06.b_44_1049

seq1  GAATTCTATTTTGGGCTGTTAAGCTATTATTATAGGAAATCTTTAGATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTTGGGCTGTTAAGCTATTATTATAGGAAATCTTTAGATTG  50

seq1  AAAGTAGTTCTTACCCTTAGACAACAAGACTCTAGAAGTGCACTCAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGTTCTTACCCTTAGACAACAAGACTCTAGAAGTGCACTCAGACT  100

seq1  TCTTAGTCCTGACCCATGTTCTCCATGTAAGGAGAGTTGTAAACAACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTCCTGACCCATGTTCTCCATGTAAGGAGAGTTGTAAACAACTCA  150

seq1  ATACTATAAACGTCATGCAGAATATAAAATCTTCTTACTATATCGCGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATAAACGTCATGCAGAATATAAAATCTTCTTACTATATCGCGGGC  200

seq1  TGATTGCTCATCTACGTTTCTCTCGAAAAGAGAAACCCCACTTCTTGTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCTCATCTACGTTTCTCTCGAAAAGAGAAACCCCACTTCTTGTCG  250

seq1  AGAACCTGTTCTCCCTGATCCTCCTTTCATCATAGCTATTCTGTGCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTGTTCTCCCTGATCCTCCTTTCATCATAGCTATTCTGTGCTGCT  300

seq1  GGACATTGTTGCATTTGTAGACTGAGAAATCGGTGGGGACTTTGCAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTGTTGCATTTGTAGACTGAGAAATCGGTGGGGACTTTGCAGTGA  350

seq1  TACAAAGATAAAATATTAGCATTCTTCAAGCAGGACACACAGAAAAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGATAAAATATTAGCATTCTTCAAGCAGGACACACAGAAAAGTAT  400

seq1  TAGTGAAATCTTTCCAACTGCAAAGAAGAGATCAGTGATTCTCAAATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAATCTTTCCAACTGCAAAGAAGAGATCAGTGATTCTCAAATGGA  450

seq1  AGGTCTCATCAGAAATATTTTTTCTGCTTGCACAATTGCAGACTAGGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCATCAGAAATATTTTTTCTGCTTGCACAATTGCAGACTAGGCCC  500

seq1  AGGGATCTGTATATTAAAAACTCTTTACAATAACTTCTGAGGTGGCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCTGTATATTAAAAACTCTTTACAATAACTTCTGAGGTGGCTCTG  550

seq1  TGCATGCCATTGTTATAAGTACTGGTTGGTTTTAAATTCTCAGCAGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCCATTGTTATAAGTACTGGTTGGTTTTAAATTCTCAGCAGCTTT  600

seq1  CCCTTACTGCTTGGTTGTACTGTGGCCCTTGGTTATCTGTCTCTCTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACTGCTTGGTTGTACTGTGGCCCTTGGTTATCTGTCTCTCTCCCT  650

seq1  CGTTGTTGTTTTTTTTTTTTTCTTTCATTGTCAACCTCCGCACAGAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTTGTTTTTTTTTTTTTCTTTCATTGTCAACCTCCGCACAGAAGGA  700

seq1  TCTAGCAAGTTGGTTGATCATCAAGTTTGAGGGTTTGGGGTTGAGATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCAAGTTGGTTGATCATCAAGTTTGAGGGTTTGGGGTTGAGATGAA  750

seq1  TGCCAGAGGATTAGTGGAGTCCTGTTGGTCCAGGTGTATGTCTCTCATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAGGATTAGTGGAGTCCTGTTGGTCCAGGTGTATGTCTCTCATGC  800

seq1  ACTTACTCAGATGAAATTCATGATTACTTTCCAAGTCACAAAATGTCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTCAGATGAAATTCATGATTACTTTCCAAGTCACAAAATGTCACC  850

seq1  ATAGTCCATTTTCTCAGTAGATGGTGGCATGACTGAAAAAAAAGAACCAT  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAGTCCATTTTCTCAGTAGATGGTGGCATGACTGAAAAAAAAGAA-CAT  899

seq1  AATTGAAAATTCTATGCAATATCTAGGACAGAATTTTGGGACAAGCATGC  950
       |||| |||||||||   ||||||||||||| ||||| |||| |||||||
seq2  -ATTG-AAATTCTATTGCATATCTAGGACAG-ATTTTTGGAC-AGCATGC  945

seq1  AAATACCAGGTGTAACAAATACCATAAAGTTCTAGCCCCTCAGCAAGAAA  1000
       |||| ||||||||| ||||| ||||||||||||| ||||||||||||| 
seq2  -AATA-CAGGTGTAA-AAATA-CATAAAGTTCTAG-CCCTCAGCAAGAA-  989

seq1  ATATACTTGCTACCGAGCA  1019
        |||  ||||||||||||
seq2  --ATAACTGCTACCGAGCA  1006

seq1: chr6_22974459_22975443
seq2: B6Ng01-010E06.g_65_1049 (reverse)

seq1  TCATCATACTACATCCTCATCCCCATTTAAACATGCTGGTTTTATTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATACTACATCCTCATCCCCATTTAAACATGCTGGTTTTATTCATT  50

seq1  TACATAATTAAAGTT-CCAAATTATGTGGCATTTTGATTTGTGTGCAACT  99
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TACATAATTAAAGTTCCCAAATTATGTGGCA-TTTGATTTGTGTGCAACT  99

seq1  GTTTGAAACATTCTGTTGTGTTAGTATGTGACAAATGTATTTATTGCATG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAACATTCTGTTGTGTTAGTATGTGACAAATGTATTTATTGCATG  149

seq1  ATCATAGTTTTCCATTGTAAACCTAATATGAACACTTTCTTTTCTCATTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGTTTTCCATTGTAAACCTAATATGAACACTTTCTTTTCTCATTT  199

seq1  GTCGTGTGCTGTGGAATGTGATTTCTTTACTTTTTTGGCATTCATTTCCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTGTGCTGTGGAATGTGATTTCTTTACTTTTTTGGCATTCATTTCCT  249

seq1  CATTAGACACTGAAAGAGTTTTACCAGGTAAGGCATTATTTCACTGCATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGACACTGAAAGAGTTTTACCAGGTAAGGCATTATTTCACTGCATT  299

seq1  TCCTTTTAGCCAAGAAGTAGTTGTAACATGTAAATGTGTTTATATATATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTAGCCAAGAAGTAGTTGTAACATGTAAATGTGTTTATATATATA  349

seq1  TATATATATATATATATACATACATACATACATTTTTTTTTGCTAGACCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATACATACATACATACATTTTTTTTTGCTAGACCA  399

seq1  TTTGATTAGTTTTGTCTTCCTTATATTTAAAGGCACTTATTTTGAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTAGTTTTGTCTTCCTTATATTTAAAGGCACTTATTTTGAAAGAA  449

seq1  TTTGTGTTAAAAGGCAATGCCTGCCCTTTTTTTCCAGGAAGTGCAGAGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTAAAAGGCAATGCCTGCCCTTTTTTTCCAGGAAGTGCAGAGCT  499

seq1  GTACTGCTGACTTAGGCATCACAGCAGACAGCTCCAATCACCCAGACAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCTGACTTAGGCATCACAGCAGACAGCTCCAATCACCCAGACAAC  549

seq1  AAGCACAAGAACAGATACGTCAATATCGTAGCCTGTAAGTACGTTCTTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAGAACAGATACGTCAATATCGTAGCCTGTAAGTACGTTCTTAA  599

seq1  CTCCGAGGACGGCAGCCTCATTGTTGCTGTCCTATCAACCGGTGTCCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGAGGACGGCAGCCTCATTGTTGCTGTCCTATCAACCGGTGTCCTTG  649

seq1  CGCTGTCTGCCAATGGATTCAGTGGGGTTGTCTCAAGGCCTGTGTGATCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGTCTGCCAATGGATTCAGTGGGGTTGTCTCAAGGCCTGTGTGATCA  699

seq1  GGGAGAGACTCTTCTGCCTGCTAACACCAGCATTGCAGTAGGGTCACTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGACTCTTCTGCCTGCTAACACCAGCATTGCAGTAGGGTCACTTC  749

seq1  TGCACATGCTATCATCAGTGGCATTGATTTCTTTTATACAGAAGGATCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGCTATCATCAGTGGCATTGATTTCTTTTATACAGAAGGATCTT  799

seq1  CAGCCCTTTCCTCGGGCCTCATAGTCTGTATTTCTCTAACTGTGGTTTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTTCCTCGGGCCTCATAGTCTGTATTTCTCTAACTGTGGTTTCA  849

seq1  GGCATTGTTTATAGTTCACAGTCCAACTTCTACTGAGGATCCGCTACCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGTTTATAGTTCACAGTCCAACTTCTACTGAGGATCCGCTACCTC  899

seq1  TTAGTGAATTTATTGACCAGCTAAGATTCTCTGGGCTTCTTCTTTCTGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAATTTATTGACCAGCTAAGATTCTCTGGGCTTCTTCTTTCTGCT  949

seq1  CCTACCTGGGCTTGCTTCCAGCCTTTCTTGGAATTC  985
      ||||||||||||||||||||||||||||||||||||
seq2  CCTACCTGGGCTTGCTTCCAGCCTTTCTTGGAATTC  985