BAC Information

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BAC

Clone NameB6Ng01-010G09
Chromosome6 (Build37)12 (Build37)
Map Location 18,835,441 - 18,835,96843,389,287 - 43,389,817
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010G09.bB6Ng01-010G09.g
ACCDH846077DH846078
length922525
definitionDH846077|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G09, 5' end.DH846078|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,441 - 18,835,968)(43,389,287 - 43,389,817)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtctgttgccttgcagaaactttggagttcat
taggtcccatttgtcaattctcgatcttacagcacaagccattgatgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataaatttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacaagataacaatcagttgtgccagtaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagta
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctatacccatacaatgcagtttttatcataattgct
ctgtagtaaagcgttaggtcaggcatggtgattccacctgaggttctttt
atccttgagaagactttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagatttgaagttttatcataca
gatctttcacttccttagtaga
ctcttggaaacaggaggtagttaggaggtatgaatgtggaacagtcaaag
ggtggaccaggaggggaataaaatcttgagtttaaaataaaattttaaaa
atgtcattgttgttactatgacaggagcctagcacggctgttgtcttaga
ggttctacctagcagttgagtgagacagatgcagatacttaacagctaag
cattgaactgaagttggggacccgtatggaagaattaggggaagaaatgt
aagaacgaaaggggatggcaacaccataaaaagacccacactgtcaacta
atctggacccctgagagctcccagagactaatccaccagtcaaagagcat
acatgagctggtctgaggctcctggtacatgtgtagcagaggactggctt
gtctggccctggtgggagaggctgtttgttttgcctagacctgtagagac
ttgattccccagagatggaggatacccccaggggcaggcaccctctcaga
ggtgaagggggagatggggtgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-010G09.b_45_572 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| ||||||||||||||||||||| |||||||||||||||||||||
seq2  CCCAGAAATGAACCCACACACCTATGGTTACTTGATCTTCGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTACTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  CACAACTGATTGTTATCTTGTAGAAGAATGCGAATCGATCCATACTTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTGAAATTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||
seq2  ATGGGCACAGGGGAAAAATTCCTGAACAGAACATCAATGGCTTGTGCTGT  300

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       || | |||||| |||||||||||||||||| ||||||||||||||||||
seq2  AAGATCGAGAATTGACAAATGGGACCTAATG-AACTCCAAAGTTTCTGCA  349

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAA  499

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr12_43389287_43389817
seq2: B6Ng01-010G09.g_66_596

seq1  GAATTCCTCTTGGAAACAGGAGGTAGTTAGGAGGTATGAATGTGGAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTGGAAACAGGAGGTAGTTAGGAGGTATGAATGTGGAACAG  50

seq1  TCAAAGGGTGGACCAGGAGGGGAATAAAATCTTGAGTTTAAAATAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGGTGGACCAGGAGGGGAATAAAATCTTGAGTTTAAAATAAAATT  100

seq1  TTAAAAATGTCATTGTTGTTACTATGACAGGAGCCTAGCACGGCTGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGTCATTGTTGTTACTATGACAGGAGCCTAGCACGGCTGTTGT  150

seq1  CTTAGAGGTTCTACCTAGCAGTTGAGTGAGACAGATGCAGATACTTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGGTTCTACCTAGCAGTTGAGTGAGACAGATGCAGATACTTAACA  200

seq1  GCTAAGCATTGAACTGAAGTTGGGGACCCGTATGGAAGAATTAGGGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCATTGAACTGAAGTTGGGGACCCGTATGGAAGAATTAGGGGAAG  250

seq1  AAATGTAAGAACGAAAGGGGATGGCAACACCATAAAAAGACCCACACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAGAACGAAAGGGGATGGCAACACCATAAAAAGACCCACACTGT  300

seq1  CAACTAATCTGGACCCCTGAGAGCTCCCAGAGACTAATCCACCAGTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAATCTGGACCCCTGAGAGCTCCCAGAGACTAATCCACCAGTCAAA  350

seq1  GAGCATACATGAGCTGGTCTGAGGCTCCTGGTACATGTGTAGCAGAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATACATGAGCTGGTCTGAGGCTCCTGGTACATGTGTAGCAGAGGAC  400

seq1  TGGCTTGTCTGGCCCTGGTGGGAGAGGCTGTTTGTTTTGCCTAGACCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTCTGGCCCTGGTGGGAGAGGCTGTTTGTTTTGCCTAGACCTGT  450

seq1  AGAGACTTGATTCCCCAGAGATGGAGGATACCCCCAGGGGCAGGCACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTGATTCCCCAGAGATGGAGGATACCCCCAGGGGCAGGCACCCT  500

seq1  CTCAGAGGTGAAGGGGGAGATGGGGTGGGGA  531
      |||||||||||||||||||||||||||||||
seq2  CTCAGAGGTGAAGGGGGAGATGGGGTGGGGA  531