BAC Information

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BAC

Clone NameB6Ng01-011J22
Chromosome6 (Build37)
Map Location 104,074,125 - 104,074,449
singlet/doubletsinglet
Overlap genenone
Upstream geneChl1, LOC666141, LOC100043345
Downstream geneCntn6, LOC384470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011J22.bB6Ng01-011J22.g
ACCDH846953DH846954
length1,074325
definitionDH846953|Mus musculus domesticus DNA, BAC clone: B6Ng01-011J22, 5' end.DH846954|Mus musculus domesticus DNA, BAC clone: B6Ng01-011J22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttatctcagtaccccatttattgattgggttatttgggt
tatttgtgtgtatcttcttgagttctttgtaaattttggatattagccct
ctctcagatgtagggttggtgaagctcttttctcaatctgtggcctgctg
atttgtcccattgacagtgtcatttgccttacataagctttgcagtttca
tgagatcccatgtaccaattgttgatcttagagcttgaggctttagtgtt
ctgttcaggaaattatctcctgtaccaatgcattccaggttatttcccac
tttctcttctatgagatgtagtgtatctggctttatgatgaggttcttga
tccccttggacttgagttttatgcagagtcatgagtatggatctattatc
attttttctccatgtagatatccagttagactgacattcattgaagatgc
ttttattttcccattgtggggtttaagcttctttataaaaaatctaatgt
ccataggtgcatgggcttttttctgggtcttcagtttggtttcactgatc
aacatgtctgtttctgtaccatcactattgctagtagcagactttgaggt
cagggatggtgaatattctcaaaggtcttttattgctcagaattgtttgg
ctatcctgtgatatttgtttttccatatgaagttgagaattggtcttcca
aggtttctaaaatagtgtgttggagttttgaatccattgcaatgaatttg
tagattgcttttggtaaaatgaccattgtcactataataattctacctct
tcatgagcatgggagatctttccatctttctgataccttcttcaatttat
ctcttttggggacttgaagttcttgttatacagatcttaacttcattggt
taaagtataccaagatattttacattattaagtggctattgtgaaagtgt
gtttcactaatttctttctctgcctggtaatatcatttgtgtaagggagg
gctaatggtatctttgtgctagtggtgtacccagccactttggctggagg
ggtttatctacctgtagaagttcc
acttcagacttcacttttctgctttggaactgtgtgtgcatacataatat
ttaagataaggaaaatatgtaaagagagagtaaagatggtgactaaaact
acaactcttcctcaaaggataaaaagaaaagaaaaaggcatgggagataa
acaaaaaaagtgtgtgttggagatagacagatctagctttatatcctttg
ccacatctaaaccttttataattactttgtcttcacagttccttttccat
tcttttgaaataaaatctttatgtgtgtatttatctgtgggagaaagggg
aggtagtgcataagtggtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_104074125_104074449
seq2: B6Ng01-011J22.g_74_398 (reverse)

seq1  CACACACACCACTTATGCACTACCTCCCCTTTCTCCCACAGATAAATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACCACTTATGCACTACCTCCCCTTTCTCCCACAGATAAATACA  50

seq1  CACATAAAGATTTTATTTCAAAAGAATGGAAAAGGAACTGTGAAGACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAAGATTTTATTTCAAAAGAATGGAAAAGGAACTGTGAAGACAAA  100

seq1  GTAATTATAAAAGGTTTAGATGTGGCAAAGGATATAAAGCTAGATCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATAAAAGGTTTAGATGTGGCAAAGGATATAAAGCTAGATCTGTC  150

seq1  TATCTCCAACACACACTTTTTTTGTTTATCTCCCATGCCTTTTTCTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCAACACACACTTTTTTTGTTTATCTCCCATGCCTTTTTCTTTTC  200

seq1  TTTTTATCCTTTGAGGAAGAGTTGTAGTTTTAGTCACCATCTTTACTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCCTTTGAGGAAGAGTTGTAGTTTTAGTCACCATCTTTACTCTC  250

seq1  TCTTTACATATTTTCCTTATCTTAAATATTATGTATGCACACACAGTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACATATTTTCCTTATCTTAAATATTATGTATGCACACACAGTTCC  300

seq1  AAAGCAGAAAAGTGAAGTCTGAAGT  325
      |||||||||||||||||||||||||
seq2  AAAGCAGAAAAGTGAAGTCTGAAGT  325