BAC Information

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BAC

Clone NameB6Ng01-011M24
Chromosome6 (Build37)
Map Location 46,502,504 - 46,503,643
singlet/doubletsinglet
Overlap geneCntnap2
Upstream geneRbpsuh-rs3
Downstream geneLOC622745, LOC100041064, LOC100041078, A930035D04Rik, Cul1, Ezh2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011M24.bB6Ng01-011M24.g
ACCDH847090DH847091
length1,1211,209
definitionDH847090|Mus musculus domesticus DNA, BAC clone: B6Ng01-011M24, 5' end.DH847091|Mus musculus domesticus DNA, BAC clone: B6Ng01-011M24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgtaccccatttttaaatatggttatttggtt
ttcttagagtccaacttcttgagttctttatcaatattggatattagtcc
cctattggatttagggttggtggcctttttgtcttattgacagtgtcctt
tgccttacagaagctttgcaattttatgaggtcccatttgttgattcttg
atcttacagcacaagccattgctgctctgttcaggattttttccccttgt
gcccatatctttgaggctctttcccactttctcctttataagtttcagtg
tatctggttttatgtggaggtccttgatccacttagacttgagctttgta
caaaaaaaagtaagaatggttcaatttacattcttctacattttaactgc
cagttgaaccagcaccatttgtggaaatgctgtcttttatccactggaca
gttttagctccttttataacataattttaagttcaaactatttatgctat
taccttacactattgattttaagactacagtaaataatcttttatcagaa
ctagagattacaactaattggccacactgatttttttaatgatggacaga
cacaacattcactagcaaagctagacatacagtatattcgatcacagtac
atctttgattaagttacattggctaaaatcatattgacacccacataaaa
atatttacagcattagagctgtgtacttccaatgtaccaagggaaagacc
tctgccagaaacacagtatacctgtgtttaagattcagttcttcacaact
atctttctgcaaacatgctcactgccacatctacactcatatgtattcgc
tttcatttggggaggaaagaacctaaagaggaggcataggccctagtgag
gaggccaatggaacacttttttttttttgccaccatatgcctgttcaaac
ttccttgctttatccatgactgtttcgatttcttggacttgaaacagtac
atttccagtgttgacaagagttatatcagtatatctctcatctgtgcagc
tgtatagttgtgactctgagtgacatcatgtagttccgcaattcttccca
tgagccatggaagtcttatta
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagcccccgccctgcgtagtgcgtcagca
atgcgcagagaggcaatgcgcagagagatgcgcagagaggcagtgcgcag
agaggcaatgcgcagagaggcagtgcgcagactcattcattcccagagag
gaacaaaggaaaatacaacaggcatttccggtctttgaaggagccgaggg
tgggcgtgtccacgctccggtagaatacttacaaattaaagagcttgccg
agtcggtccgtaaatacggaaccaatgctaattttaccttggtgcagtta
gacaggcttgccggcatggcactaactcctgctgactggcaaacggttgt
aaaagccgctctccctagtatgggcaaatatatggaatggagagctcttt
ggcatgaaactgcacaagcacaggcccgagcaaacgcagctgctttgact
ccagagcagagagattggacttttgacttgttaacgggtcagggagctta
ttctgctgatcaaacaaactaccattggggagcttatgcccagatttctt
ccacggctattagggcctggaaggcgctctcccgagcaggtgaaaccact
ggtcaattaacaaaagttgtccagggacctcaggaatccttctcagattt
tgtggccagaatgacagaggcagcagagcgtatttttggagagtcagagc
aagctgcgcctctgatagaacagctaatctatgagcaagccacaaaggag
tgccgagcggccatagccccaagaaagaacaaaggcttacagactggctc
aggtctgtcgagagcttggggacctctcaccaatgcaggcttagcgccgc
catcttcaatctcagaaccgctccatgagcagaaatgatcagaggacatg
tttaattgcgaagccttggcaatttaagaagattgcagagccttcagaat
aacagggaaaggacttctcactcttgctctaagtgtggcaagtactatag
actgacaggtcgctcttgagggattaaagggagagagtctttctctctcc
cagtagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_46502504_46503643
seq2: B6Ng01-011M24.b_46_1166

seq1  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAAATATGGTTATTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAAATATGGTTATTTGGTT  50

seq1  TTCTTAGAGTCCAACTTCTTGAGTTCTTTATCAATATTGGATATTAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGAGTCCAACTTCTTGAGTTCTTTATCAATATTGGATATTAGTCC  100

seq1  CCTATTGGATTTAGGGTTGGTGGCCTTTTTGTCTTATTGACAGTGTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGGATTTAGGGTTGGTGGCCTTTTTGTCTTATTGACAGTGTCCTT  150

seq1  TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTTGATTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTTGATTCTTG  200

seq1  ATCTTACAGCACAAGCCATTGCTGCTCTGTTCAGGATTTTTTCCCCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACAGCACAAGCCATTGCTGCTCTGTTCAGGATTTTTTCCCCTTGT  250

seq1  GCCCATATCTTTGAGGCTCTTTCCCACTTTCTCCTTTATAAGTTTCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATATCTTTGAGGCTCTTTCCCACTTTCTCCTTTATAAGTTTCAGTG  300

seq1  TATCTGGTTTTATGTGGAGGTCCTTGATCCACTTAGACTTGAGCTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGTTTTATGTGGAGGTCCTTGATCCACTTAGACTTGAGCTTTGTA  350

seq1  CAAAAAAAAGTAAGAATGGTTCAATTTACATTCTTCTACATTTTAACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAGTAAGAATGGTTCAATTTACATTCTTCTACATTTTAACTGC  400

seq1  CAGTTGAACCAGCACCATTTGTGGAAATGCTGTCTTTTATCCACTGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGAACCAGCACCATTTGTGGAAATGCTGTCTTTTATCCACTGGACA  450

seq1  GTTTTAGCTCCTTTTATAACATAATTTTAAGTTCAAACTATTTATGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGCTCCTTTTATAACATAATTTTAAGTTCAAACTATTTATGCTAT  500

seq1  TACCTTACACTATTGATTTTAAGACTACAGTAAATAATCTTTTATCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTACACTATTGATTTTAAGACTACAGTAAATAATCTTTTATCAGAA  550

seq1  CTAGAGATTACAACTAATTGGCCACACTGATTTTTTTAATGATGGACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATTACAACTAATTGGCCACACTGATTTTTTTAATGATGGACAGA  600

seq1  CACAACATTCACTAGCAAAGCTAGACATACAGTATATTCGATCACAGTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACATTCACTAGCAAAGCTAGACATACAGTATATTCGATCACAGTAC  650

seq1  ATCTTTGATTAAGTTACATTGGCTAAAATCATATTGACACCCACATAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGATTAAGTTACATTGGCTAAAATCATATTGACACCCACATAAAA  700

seq1  ATATTTACAGCATTAGAGCTGTGTACTTCCAATGTACCAAGGGAAAGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACAGCATTAGAGCTGTGTACTTCCAATGTACCAAGGGAAAGACC  750

seq1  TCTGCCAGAAACACAGTATACCTGTGTTTAAGATTCAGTTCTTCACAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAGAAACACAGTATACCTGTGTTTAAGATTCAGTTCTTCACAACT  800

seq1  ATCTTTCTGCAAACATGCTCACTGCCACATCTACACTCATATGTATTCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTGCAAACATGCTCACTGCCACATCTACACTCATATGTATTCGC  850

seq1  TTTCATTTGGGGAGGAAAGAACCTAAAGAGGAGGCATAGGCCCTAGTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTGGGGAGGAAAGAACCTAAAGAGGAGGCATAGGCCCTAGTGAG  900

seq1  GAGGCCAATGGAACACTTTTTTTTTTTTTGCCACCATATGCCTGTTCAAA  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGGCCAATGGAACAC-TTTTTTTTTTTTGCCACCATATGCCTGTTCAAA  949

seq1  CTTCCTTGCTTTTATCCATGACTGTTTCGATTTCTTGGACTTGAAACAGT  1000
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGC-TTTATCCATGACTGTTTCGATTTCTTGGACTTGAAACAGT  998

seq1  ACATTTCCAGTTGTTGAACAAAGAAGTTAATATCAGTTAATATCTCTCAT  1050
      |||||||||| ||||| ||||   |||| ||||||||  |||||||||||
seq2  ACATTTCCAG-TGTTG-ACAA--GAGTT-ATATCAGT--ATATCTCTCAT  1041

seq1  CTGTGCAAGCTGTATAAGTTGTGACTCTGAAGTGACCATCAATGTAGTTC  1100
      |||||| |||||||| ||||||||||||| ||||| |||| |||||||||
seq2  CTGTGC-AGCTGTAT-AGTTGTGACTCTG-AGTGA-CATC-ATGTAGTTC  1086

seq1  CAGCATTTCTACACCAATGGAGCAGTGGGAAGTCTTATTA  1140
      | ||| |||| | |||   ||||  | |||||||||||||
seq2  C-GCAATTCTTC-CCA--TGAGCCAT-GGAAGTCTTATTA  1121