BAC Information

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BAC

Clone NameB6Ng01-013F15
Chromosome6 (Build37)
Map Location 119,741,139 - 119,742,112
singlet/doubletsinglet
Overlap geneErc1
Upstream geneCacna1c, Dcp1b, Cacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14
Downstream geneLOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik, Cecr2, Slc25a18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013F15.bB6Ng01-013F15.g
ACCDH848185DH848186
length9651,004
definitionDH848185|Mus musculus domesticus DNA, BAC clone: B6Ng01-013F15, 5' end.DH848186|Mus musculus domesticus DNA, BAC clone: B6Ng01-013F15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattacattctatttggctgttttgtttgtttgtttgttttgtt
tcctatgacattttaatctgaatcttgttagtacagcttttcatgtgtta
gggtttatgtgtttgaggttaaaagtactaatatttgtatagattctagc
ctatgaattctgaattttggctagtatattagagaagtatctgagttttc
ttgacagtgagaagttataagagtaaaaaagcaagagatatatagagaaa
tagatagtggactagggatatatcttagatgatttaatctcaacactgca
taaaccagtgggaagcgtaggcagaaggatcaggaattaaaaggtcagtt
gcgtctacatagggaattcaataccagcctggtttatatgagatcctgtc
tcaaagaggaaaatagcagatagtgaatagaaggaattggaataaaaaag
aattccagtattagtatgtttggcattttgtagtgattttggaaagtgag
gaccattaattatgttgtttattcagatattttctcctgctctgttttta
gtatgtcattttcttatttccattttgtcaagaagatagtttcctcatta
cagtgtagctgctacagatggcaaagggctatagaaccacactgttcatc
attggatgagagaaggtaccaaacaagtagtgaggagcctttttatcccc
ccgcttcatttccatctcttctgtgaatgcagtactctattctagaactt
atatggaggattgactttgtcaggggacttcacaaacatttgacctaaga
gcaagcagggctcaaacttaacatttgaaaaagagaaatttcagactttt
ttttttaatgaaattttttattacttattcccttacattccaatattagc
accctcccagtacttcctcaaacagatctctccccatcccccaccccctt
ctctctgagaggggg
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggttaagatcaaaaattcaggcaacagc
agatgctgtcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaaccagtctggcggtttctta
ggaaattgaacattgtactaccggaggatcccacaatacctctcctgggc
atatatccagaagatgtttcaactagtaagaaagaaacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaactcagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcattatcctgagtgaggtaacccaatcacaaa
agaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagctacaatttgcaaaacacatgaaactcag
gaagaatgaagaccaaagtgtggacactttggccccttcttagatttggg
aacaaaacacctatggaaggagtttacagagacaaagtttggagctggga
caaagggatggaccatctagagactgccatatccagggatctatcccatt
aatcaagcctccaaacgcttgaaccatttgcatacactagcaagattttg
ctgaataggaccctgaatatagcttacgcagaagcctagcaaacacgtta
gtggaatgcttacaggccagctattggaaggattacaggcccccaatgga
gagctgaataaaataccaaggagctaaggatctggcaccctattggtgac
cacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_119741139_119742112
seq2: B6Ng01-013F15.b_45_1009 (reverse)

seq1  CCCCTTCTCAGAGAAGAAGGGGGTGGGGGATGGGGAGAAGATCTGTTTGA  50
      |||| |||||||| ||||||||||||||||||||||| ||||||||||||
seq2  CCCCCTCTCAGAG-AGAAGGGGGTGGGGGATGGGGAG-AGATCTGTTTGA  48

seq1  GGAGGTACTGGGAGGGGGTGCTAATATTGGAATGTAAAGGGAATAAAGTA  100
      ||| |||||||||  |||||||||||||||||||| |||||||| |||||
seq2  GGAAGTACTGGGA--GGGTGCTAATATTGGAATGT-AAGGGAAT-AAGTA  94

seq1  ATAAAAAAATTTCAATTAAAAAAAAAAGTCTGAAATTTCTCTTTTTTCAA  150
      || |||||||||| ||||||||||||||||||||||||||| ||||||||
seq2  AT-AAAAAATTTC-ATTAAAAAAAAAAGTCTGAAATTTCTC-TTTTTCAA  141

seq1  ATGTTAAGTTTGAGCCCTGCTTGCTCTTAGGTCAAATGTTTGTGAAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGTTTGAGCCCTGCTTGCTCTTAGGTCAAATGTTTGTGAAGTCC  191

seq1  CCTGACAAAGTCAATCCTCCATATAAGTTCTAGAATAGAGTACTGCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAAAGTCAATCCTCCATATAAGTTCTAGAATAGAGTACTGCATTC  241

seq1  ACAGAAGAGATGGAAATGAAGCGGGGGGATAAAAAGGCTCCTCACTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGAGATGGAAATGAAGCGGGGGGATAAAAAGGCTCCTCACTACTT  291

seq1  GTTTGGTACCTTCTCTCATCCAATGATGAACAGTGTGGTTCTATAGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTACCTTCTCTCATCCAATGATGAACAGTGTGGTTCTATAGCCCT  341

seq1  TTGCCATCTGTAGCAGCTACACTGTAATGAGGAAACTATCTTCTTGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATCTGTAGCAGCTACACTGTAATGAGGAAACTATCTTCTTGACAA  391

seq1  AATGGAAATAAGAAAATGACATACTAAAAACAGAGCAGGAGAAAATATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAATAAGAAAATGACATACTAAAAACAGAGCAGGAGAAAATATCT  441

seq1  GAATAAACAACATAATTAATGGTCCTCACTTTCCAAAATCACTACAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAACAACATAATTAATGGTCCTCACTTTCCAAAATCACTACAAAAT  491

seq1  GCCAAACATACTAATACTGGAATTCTTTTTTATTCCAATTCCTTCTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACATACTAATACTGGAATTCTTTTTTATTCCAATTCCTTCTATTC  541

seq1  ACTATCTGCTATTTTCCTCTTTGAGACAGGATCTCATATAAACCAGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTGCTATTTTCCTCTTTGAGACAGGATCTCATATAAACCAGGCTG  591

seq1  GTATTGAATTCCCTATGTAGACGCAACTGACCTTTTAATTCCTGATCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAATTCCCTATGTAGACGCAACTGACCTTTTAATTCCTGATCCTT  641

seq1  CTGCCTACGCTTCCCACTGGTTTATGCAGTGTTGAGATTAAATCATCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTACGCTTCCCACTGGTTTATGCAGTGTTGAGATTAAATCATCTAA  691

seq1  GATATATCCCTAGTCCACTATCTATTTCTCTATATATCTCTTGCTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATCCCTAGTCCACTATCTATTTCTCTATATATCTCTTGCTTTTTT  741

seq1  ACTCTTATAACTTCTCACTGTCAAGAAAACTCAGATACTTCTCTAATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTATAACTTCTCACTGTCAAGAAAACTCAGATACTTCTCTAATATA  791

seq1  CTAGCCAAAATTCAGAATTCATAGGCTAGAATCTATACAAATATTAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCAAAATTCAGAATTCATAGGCTAGAATCTATACAAATATTAGTAC  841

seq1  TTTTAACCTCAAACACATAAACCCTAACACATGAAAAGCTGTACTAACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACCTCAAACACATAAACCCTAACACATGAAAAGCTGTACTAACAA  891

seq1  GATTCAGATTAAAATGTCATAGGAAACAAAACAAACAAACAAACAAAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGATTAAAATGTCATAGGAAACAAAACAAACAAACAAACAAAACA  941

seq1  GCCAAATAGAATGTAATGGAATTC  974
      ||||||||||||||||||||||||
seq2  GCCAAATAGAATGTAATGGAATTC  965