BAC Information

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BAC

Clone NameB6Ng01-014A19
Chromosome6 (Build37)
Map Location 63,465,502 - 63,466,468
singlet/doubletsinglet
Overlap geneGrid2
Upstream geneGA_x5J8B7W6GG0-4757855-4757501, LOC667099
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014A19.bB6Ng01-014A19.g
ACCDH848704DH848705
length952968
definitionDH848704|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A19, 5' end.DH848705|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagttagactccggggaaccaaataaacctattaaaaatgg
ggtacagagctaaacaaataattatcaactgagggatatagaatgtccaa
gaagcacctaaagaaatgttcaatgtccttagtcatcaggaaaatgcaaa
tcaaatgaccaacatataacaaggacatatgcatcactatgttcatagca
gccttatttaaaatagtctaaagctggaaacaatccagatgtccctcaac
agaagaatagattcagaaaatatggtacatttacgcaatggagtactact
cagctattaaaaataatgacttatgcaatacttctcctgagcaagtggat
attagcccagaaacttaggatacccaagatataagatacaacttgccaaa
cgcatgaaattcaagaagaacgaagaccaaagggtggacactttaccctt
tcttagaaatgggaacaaaacacccatagaaggagttacagagacaaaat
ttggagctgtgacgaaaggatggaccatctagtgatagccatatgcaggg
atccatcccataatcagcttccaaatgctgacaccattgcatacactaac
aagattttgctgaaaggacccagatatagctctctcttgtgagactatgc
cggggcctagcaaacacagaagtggatgctcacagtcagctattggatgg
atcacagggcccccaatggaggagctagagaaagtactcgaggagctaaa
gggatctgcaaccctataggtggaacaacattatgaactaacaagtaccc
cggagctcttaactctagctgcatatgtatcaaaagatggcctagttggt
catcactgcaaagagaggcccattggacttgcaaactttatatgccccag
tacaggggaacgccagggccaaaaagggggagtgggtggggtaggggatt
gg
gaattctatgaaatgtaatgcacagaatgttataactgggactctacaat
ctgtattgttttacagtcttaatggtattttggggtttgcttgtttgttt
ggttttttttctggtttttattttgttttgttttgtttttcaattagttt
aacctctctgtgcctaattctatatataaaatgtgaacaatcactaacgt
ttaactggatgatcaggatggagtgtattagtaggtgtgaagacggtagc
ttctaaccatctcatagcgaacaataactgtcagatacagtgctgtgtat
gctatggctgctactgctttactgaactggaaacagggaaagtaccaaag
acagggtgcgccattaccaatacttattgtacttgatgacgtgtaacaga
gtaaattctaggaggcagattctagaaatgcataaggcacacgtctgtct
gttaaggataaggattgtggatggcaatttggacattaaggtcaaattga
aagcaaccaaggtgccaggattcgtgataaaggccattcagtgctgtgaa
tattaatgtggtcaggattgatgaggagtctcttggagaaacatgaaagc
aatgaaacattgttctgttggcagtcataggggaagacattcatcactac
agtagggtcatttgtgtacagcttcatttattttcagtagctccagtcag
aaacatgatgatggataatgtcttacacggctattgctgacttgtcaaac
ctatgccattgcctttacatatttcttgttactgttttatattttacaat
aataaaagctttatcataataaaagtttaaatgttcccacctttcattac
tatcccttgtttatacatggaaaggatgaggcttcctgatacttaccatc
ttcatattgaaccccactaacataattaactgtgggattgtataacccac
cgtggacaatcctgtagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_63465502_63466468
seq2: B6Ng01-014A19.g_66_1033 (reverse)

seq1  GCTACAGGATTTGTCACAGT-GGTTATACAA-ATCACAGTTTAATTATTG  48
      |||||||||||   ||| || ||||||||||   ||||| ||||||| ||
seq2  GCTACAGGATTGTCCACGGTGGGTTATACAATCCCACAG-TTAATTA-TG  48

seq1  TTAGTGAGTTCCAAATATGAAGATGGTAAGTATACAGAAGCCTCAATCTT  98
      |||||| | | | ||||||||||||||||||||   |||||||||  |||
seq2  TTAGTGGGGTTC-AATATGAAGATGGTAAGTATCAGGAAGCCTCATCCTT  97

seq1  TCCATGTATAAACAA-GGATAGTAATGAAAGGT-GGAACATTTAAAC-TT  145
      ||||||||||||||| ||||||||||||||||| ||||||||||||| ||
seq2  TCCATGTATAAACAAGGGATAGTAATGAAAGGTGGGAACATTTAAACTTT  147

seq1  TATTATGATTAAAGCTTTTATTATTGTAAAATATAAAACAGTAACAAGAA  195
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGA-TAAAGCTTTTATTATTGTAAAATATAAAACAGTAACAAGAA  196

seq1  TTATGTAAAGGCAATGGCATAGGTTTGACAAGTCAGCAATAGCCGTGTAA  245
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAAAGGCAATGGCATAGGTTTGACAAGTCAGCAATAGCCGTGTAA  246

seq1  GACATTATCCATCATCATGTTTCTGACTGGAGCTACTGAAAATAAATGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTATCCATCATCATGTTTCTGACTGGAGCTACTGAAAATAAATGAA  296

seq1  GCTGTACACAAATGACCCTACTGTAGTGATGAATGTCTTCCCCTATGACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTACACAAATGACCCTACTGTAGTGATGAATGTCTTCCCCTATGACT  346

seq1  GCCAACAGAACAATGTTTCATTGCTTTCATGTTTCTCCAAGAGACTCCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACAGAACAATGTTTCATTGCTTTCATGTTTCTCCAAGAGACTCCTC  396

seq1  ATCAATCCTGACCACATTAATATTCACAGCACTGAATGGCCTTTATCACG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCCTGACCACATTAATATTCACAGCACTGAATGGCCTTTATCACG  446

seq1  AATCCTGGCACCTTGGTTGCTTTCAATTTGACCTTAATGTCCAAATTGCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGGCACCTTGGTTGCTTTCAATTTGACCTTAATGTCCAAATTGCC  496

seq1  ATCCACAATCCTTATCCTTAACAGACAGACGTGTGCCTTATGCATTTCTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACAATCCTTATCCTTAACAGACAGACGTGTGCCTTATGCATTTCTA  546

seq1  GAATCTGCCTCCTAGAATTTACTCTGTTACACGTCATCAAGTACAATAAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGCCTCCTAGAATTTACTCTGTTACACGTCATCAAGTACAATAAG  596

seq1  TATTGGTAATGGCGCACCCTGTCTTTGGTACTTTCCCTGTTTCCAGTTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTAATGGCGCACCCTGTCTTTGGTACTTTCCCTGTTTCCAGTTCA  646

seq1  GTAAAGCAGTAGCAGCCATAGCATACACAGCACTGTATCTGACAGTTATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCAGTAGCAGCCATAGCATACACAGCACTGTATCTGACAGTTATT  696

seq1  GTTCGCTATGAGATGGTTAGAAGCTACCGTCTTCACACCTACTAATACAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGCTATGAGATGGTTAGAAGCTACCGTCTTCACACCTACTAATACAC  746

seq1  TCCATCCTGATCATCCAGTTAAACGTTAGTGATTGTTCACATTTTATATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTGATCATCCAGTTAAACGTTAGTGATTGTTCACATTTTATATA  796

seq1  TAGAATTAGGCACAGAGAGGTTAAACTAATTGAAAAACAAAACAAAACAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTAGGCACAGAGAGGTTAAACTAATTGAAAAACAAAACAAAACAA  846

seq1  AATAAAAACCAGAAAAAAAACCAAACAAACAAGCAAACCCCAAAATACCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAACCAGAAAAAAAACCAAACAAACAAGCAAACCCCAAAATACCA  896

seq1  TTAAGACTGTAAAACAATACAGATTGTAGAGTCCCAGTTATAACATTCTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACTGTAAAACAATACAGATTGTAGAGTCCCAGTTATAACATTCTG  946

seq1  TGCATTACATTTCATAGAATTC  967
      ||||||||||||||||||||||
seq2  TGCATTACATTTCATAGAATTC  968