BAC Information

Click to search

BAC

Clone NameB6Ng01-014I21
Chromosome6 (Build37)
Map Location 128,614,027 - 128,736,193
singlet/doubletdoublet
Overlap geneClec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862
Upstream genePrmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440
Downstream geneKlrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014I21.bB6Ng01-014I21.g
ACCDH849064DH849065
length5171,125
definitionDH849064|Mus musculus domesticus DNA, BAC clone: B6Ng01-014I21, 5' end.DH849065|Mus musculus domesticus DNA, BAC clone: B6Ng01-014I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,735,671 - 128,736,193)(128,614,027 - 128,615,182)
sequence
tgctttaagatggtggagaaaggctcatatctgcagccgaccctctactt
gaatccaattgtccttgttagtcaaaatcacctttaactgttagtccaga
tgttctgtactggcttaaatgagttacaaggtttttaacttcgcagatgc
ctgtcggtgcccacgttcacacaggttggctctgaagctcagctgtgctg
ggctcatcctccttgtcctgaccctgattgggatgagtgtcttaggtaag
tgaggccaggacttgtgcttcacaatccttcctctgcttccatcataaat
atcggtgcctcttcacatgattgggacccttgggcctggaggagggtcaa
tgacgtgagtaggaacaggacagtatcccatacccagtgagaaatttcac
attgccttcatgcttccaaattcctctgagacccattaggggctgttaac
acaaagggctctctaacaggcctgagcatggcaaagatggcaccagcaga
ttttgtcccctccccct
gaattcacacagggcaggaacctggagtcagcagctgacacagaggctgt
tgaggggtactgcttactaacttgctcctagcaatttgctcctaattctt
cttatagaagacaggacaaccatcccaggaatgacatcacccacaatgca
ctgggttcttccacaccaatcactaattaagaaaatgtagcactgtcttt
cctacaacccagacttatggaggtgttctattaattcgggtcccctactt
ccaaatgactttagcttatgtcaagttgacataaacctatccagtacaaa
cattttctcaagttagggaagttccctcaattcttaatgtgctcagaatt
gttattttggatttacctagaattttgaacatgcttttgccgattttaat
gaaatggttgttttaattttcttattctggtaatatattgaattacatat
cattaggtggttctttagagtgagtgagtgaattatctagttagctacat
tcatagagagatagaacagggtctgatagttctctcagcctcttactcaa
tatttagccaagatcagccttgaagtccttacttttttgtactagtagcc
acattcctgagccaccactcctggcacattgatttttttcctctttatta
ttattattatggtttcttcagccctaagtaggtcaattcatatatctata
gatatacaaatatctatagatactatatctctagatatactatatctcta
gatactatactatagatatactatatctatagatactatacaattggcgt
cccacacggggcctgggaaaagacagaggacacggggaaggaacactgct
ggtttacagctccatggaagagaaataattaaagaaaattcataccagga
gagttggtatgggctaagctgagcagtgctaaacccgctgctagatttca
cttagatcagcagtgagaaaatcagatctaggaacgtacagcagttagcc
gcagcttcagagctgcttttttagcgtagaaagaaggggtataaaaggat
ttatattaatggatacgccgttgaactgcctcgtggatgcagcttgtaca
acactctgggaatcatctgcgcggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128735671_128736193
seq2: B6Ng01-014I21.b_46_568 (reverse)

seq1  AGGGGGAGGGGACAAAATCTGCTGGTGCCATCTTTGCCATGCTCAGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAGGGGACAAAATCTGCTGGTGCCATCTTTGCCATGCTCAGGCCT  50

seq1  GTTAGAGAGCCCTTTGTGTTAACAGCCCCTAATGGGTCTCAGAGGAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGAGCCCTTTGTGTTAACAGCCCCTAATGGGTCTCAGAGGAATTT  100

seq1  GGAAGCATGAAGGCAATGTGAAATTTCTCACTGGGTATGGGATACTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATGAAGGCAATGTGAAATTTCTCACTGGGTATGGGATACTGTCC  150

seq1  TGTTCCTACTCACGTCATTGACCCTCCTCCAGGCCCAAGGGTCCCAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTACTCACGTCATTGACCCTCCTCCAGGCCCAAGGGTCCCAATCA  200

seq1  TGTGAAGAGGCACCGATATTTATGATGGAAGCAGAGGAAGGATTGTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGAGGCACCGATATTTATGATGGAAGCAGAGGAAGGATTGTGAAG  250

seq1  CACAAGTCCTGGCCTCACTTACCTAAGACACTCATCCCAATCAGGGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTCCTGGCCTCACTTACCTAAGACACTCATCCCAATCAGGGTCAG  300

seq1  GACAAGGAGGATGAGCCCAGCACAGCTGAGCTTCAGAGCCAACCTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGAGGATGAGCCCAGCACAGCTGAGCTTCAGAGCCAACCTGTGTG  350

seq1  AACGTGGGCACCGACAGGCATCTGCGAAGTTAAAAACCTTGTAACTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGGGCACCGACAGGCATCTGCGAAGTTAAAAACCTTGTAACTCATT  400

seq1  TAAGCCAGTACAGAACATCTGGACTAACAGTTAAAGGTGATTTTGACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCAGTACAGAACATCTGGACTAACAGTTAAAGGTGATTTTGACTAA  450

seq1  CAAGGACAATTGGATTCAAGTAGAGGGTCGGCTGCAGATATGAGCCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACAATTGGATTCAAGTAGAGGGTCGGCTGCAGATATGAGCCTTTC  500

seq1  TCCACCATCTTAAAGCAGAATTC  523
      |||||||||||||||||||||||
seq2  TCCACCATCTTAAAGCAGAATTC  523

seq1: chr6_128614027_128615182
seq2: B6Ng01-014I21.g_67_1191

seq1  GAATTCACACAGGGCAGGAACCTGGAGTCAGCAGCTGACACAGAGGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAGGGCAGGAACCTGGAGTCAGCAGCTGACACAGAGGCTGT  50

seq1  TGAGGGGTACTGCTTACTAACTTGCTCCTAGCAATTTGCTCCTAATTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGTACTGCTTACTAACTTGCTCCTAGCAATTTGCTCCTAATTCTT  100

seq1  CTTATAGAAGACAGGACAACCATCCCAGGAATGACATCACCCACAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAAGACAGGACAACCATCCCAGGAATGACATCACCCACAATGCA  150

seq1  CTGGGTTCTTCCACACCAATCACTAATTAAGAAAATGTAGCACTGTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCTTCCACACCAATCACTAATTAAGAAAATGTAGCACTGTCTTT  200

seq1  CCTACAACCCAGACTTATGGAGGTGTTCTATTAATTCGGGTCCCCTACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAACCCAGACTTATGGAGGTGTTCTATTAATTCGGGTCCCCTACTT  250

seq1  CCAAATGACTTTAGCTTATGTCAAGTTGACATAAACCTATCCAGTACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGACTTTAGCTTATGTCAAGTTGACATAAACCTATCCAGTACAAA  300

seq1  CATTTTCTCAAGTTAGGGAAGTTCCCTCAATTCTTAATGTGCTCAGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTCAAGTTAGGGAAGTTCCCTCAATTCTTAATGTGCTCAGAATT  350

seq1  GTTATTTTGGATTTACCTAGAATTTTGAACATGCTTTTGCCGATTTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTGGATTTACCTAGAATTTTGAACATGCTTTTGCCGATTTTAAT  400

seq1  GAAATGGTTGTTTTAATTTTCTTATTCTGGTAATATATTGAATTACATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGTTGTTTTAATTTTCTTATTCTGGTAATATATTGAATTACATAT  450

seq1  CATTAGGTGGTTCTTTAGAGTGAGTGAGTGAATTATCTAGTTAGCTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGTGGTTCTTTAGAGTGAGTGAGTGAATTATCTAGTTAGCTACAT  500

seq1  TCATAGAGAGATAGAACAGGGTCTGATAGTTCTCTCAGCCTCTTACTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAGAGATAGAACAGGGTCTGATAGTTCTCTCAGCCTCTTACTCAA  550

seq1  TATTTAGCCAAGATCAGCCTTGAAGTCCTTACTTTTTTGTACTAGTAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGCCAAGATCAGCCTTGAAGTCCTTACTTTTTTGTACTAGTAGCC  600

seq1  ACATTCCTGAGCCACCACTCCTGGCACATTGATTTTTTTCCTCTTTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCTGAGCCACCACTCCTGGCACATTGATTTTTTTCCTCTTTATTA  650

seq1  TTATTATTATGGTTTCTTCAGCCCTAAGTAGGTCAATTCATATATCTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATGGTTTCTTCAGCCCTAAGTAGGTCAATTCATATATCTATA  700

seq1  GATATACAAATATCTATAGATACTATATCTCTAGATATACTATATCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACAAATATCTATAGATACTATATCTCTAGATATACTATATCTCTA  750

seq1  GATACTATACTATAGATATACTATATCTATAGATACTATACAATTGGCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTATACTATAGATATACTATATCTATAGATACTATACAATTGGCGT  800

seq1  CCCACACGGGGCCTGGGAAAAGACAGAGGACAC-GGGAAGGAACACTGCT  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCCACACGGGGCCTGGGAAAAGACAGAGGACACGGGGAAGGAACACTGCT  850

seq1  GGTTTACAGCTCCATGGAAGAAGAAAATAATTAAAGAAAATTCATACCAG  899
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  GGTTTACAGCTCCATGGAAGA--GAAATAATTAAAGAAAATTCATACCAG  898

seq1  AGAAGGTTGGTATGGGCTAAGCTGGAGCAGTGCTAAACCCGCTTGCTAGA  949
       ||  |||||||||||||||||| |||||||||||||||||| |||||||
seq2  -GAGAGTTGGTATGGGCTAAGCT-GAGCAGTGCTAAACCCGC-TGCTAGA  945

seq1  TTTTCACTTAGATTCAGCAGTGAGATAATCAGGATCTAGGAACGTAACAG  999
       ||||||||||| |||||||||||| ||||| ||||||||||||| ||| 
seq2  -TTTCACTTAGA-TCAGCAGTGAGAAAATCA-GATCTAGGAACGT-ACA-  990

seq1  GCAGTTAGCCGCAGCTTCCAGAAGCTGCTTTTTTAGGCGTAAGAAAAGAA  1049
      ||||||||||||||||| ||| ||||||||||||| |||||   ||||||
seq2  GCAGTTAGCCGCAGCTT-CAG-AGCTGCTTTTTTA-GCGTA--GAAAGAA  1035

seq1  AGGGTTTAATAAAAAGGATTTAATAATTAAGTGGATTAGCCGCAGTTAGA  1099
       |||| |    |||||||||||   ||||| |||||  ||||  |     
seq2  GGGGTAT----AAAAGGATTTA--TATTAA-TGGATACGCCGTTG-----  1073

seq1  AACTGCATCAGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTC  1149
      |||||| || ||||   ||| ||||||||||| |||||||| ||||| ||
seq2  AACTGCCTC-GTGG--ATGC-AGCTTGTACAA-CACTCTGGGAATCA-TC  1117

seq1  TG-GCGGT  1156
      || |||||
seq2  TGCGCGGT  1125