BAC Information

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BAC

Clone NameB6Ng01-014J04
Chromosome6 (Build37)
Map Location 125,956,541 - 126,100,735
singlet/doubletdoublet
Overlap geneTmem16b, Ntf3
Upstream geneZfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf
Downstream geneLOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014J04.bB6Ng01-014J04.g
ACCDH849075DH849076
length1,1441,042
definitionDH849075|Mus musculus domesticus DNA, BAC clone: B6Ng01-014J04, 5' end.DH849076|Mus musculus domesticus DNA, BAC clone: B6Ng01-014J04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,099,591 - 126,100,735)(125,956,541 - 125,957,586)
sequence
gaattctcagggctgttgagagacctaaatggagcataggaattgtcagg
ccgtgaaatggatggtagttcaagatggcagcggtgtgaagagcaccata
gactgctggacaggcagagggagggtctgggcatgctccgcaagaaggac
tgctgtgtaagctgcacaccacagagcctttctacaaagagcctctgaat
cagaagccaggactatctctatagctcgtgcagactaaacaaaagatatt
cttggctatgagagctactttctcctggttccaaatgtgtaacaataacc
ttcaggatcgaccattggtctgtctttcttcctttctttctttctttctt
tctttctttctttctttctttctttcttccttccttccttccttccttcc
ttccttcctttcttccttccttctttcctctgagtcttttgattagagga
ttctgaggcttcctgaagcagtaagagagatgcgtagaagcagccattct
caactgtaggtggtgacttggttttctggagtctgatctaagacatgttg
acaaggaccatgaactaataaagttgactatggtattgaggaattgtaag
tggaatgatcgcaatggttgataggactgattctctgataattcgcctac
aggaggattcccagacatttatgtacaaatgattcttggtctgtctgtgc
ctaaagctatttggtgaaggcatgaaaaggagtacggaaatatgggagtc
aaacaaaggagctcagacgcttccttctttgtgttgctcactgataggta
ccacttctcagatcctctattttctcttgtgaaacaaactatagtaaaat
agatgctatgtgttcaacattcagtgaggtttcagatgagctcgtacata
ggaaagatcattgcaagattcagattgcaagtgcatggcagggcttaacc
tgatatgcttttcgtggtgtttgtttgtgttcctagtttactctacttct
gggataagaagtgtgacaaaaataatttgggtagggcagggtttatttta
tcttaatcttatagccacggttaggaaggctaagcagggaactcaaggca
aggagcctggaggcaaggatctgatagctgaagctagttgggat
gaattcactttcctgacaattaaccttgtcctataatgacattaacccgt
cgcctctcagcgatccggttctaacacacaaattcagtgagcagtagagc
acattcaaaccgcagcacagatggtctttgctttctcttggtgagcacga
agtctatgggtggacttcgttccatagataaatgcttgttgaatgactgg
cagatgaagtgagggagtgggtagtgaacggtgaagattgacaggtcaca
tgtctgtcacacatgctgctgctttccccagcatcagaacccagggctga
agacatggcctgcacccctcccttcccattgctctgtctattctcagcca
ccaacactcccaagtccttgtgtttgtcaccagacactcttagaagaaaa
ggatggtggagcatatctttaaaatgagggcttgagaaatgacagcactg
aattagcaccacgtgcttttccaagaccattcagcagaacaaacggacca
cataccctcccttccccgtcttgctcaccactggttcacaaaaaggatga
ccctgaaggaccaggtttccttctcgtttttcttaagataaaaatgtaga
ggaaaaaaaatctagcagtagagattaatgcaaagactaactagacaaat
gtagcaaggagcaacgaagtcaaagtcttcgtggcaatgcttaagatcga
gttttccagttctcctgtgacatttgaaagcatgagataaaacgcgtttg
atgtcctgagtttattatagtctaactgaaccactgcatttccagtcaag
ctccctgggaagagcattgtgaacctcagtgggacaatggtagcacagag
tcccaaacacaactcacagacacgcagttcccagctgcttctgttatttc
tgagagtccttccttggtctacctcagttctcacctcatttttctctcag
aggatctactcgtacttatcagacattctgcaacttaccagacaggacag
ggtcattttgcctgttttcttttatatccttggtttttacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_126099591_126100735
seq2: B6Ng01-014J04.b_48_1191 (reverse)

seq1  ATCCCACATAGCCTCAGCT-TCAGATCC-TGCCTCCAGGCTCC-TGCCTT  47
      ||||||  |||| |||||| |||||||| |||||||||||||| ||||||
seq2  ATCCCAACTAGCTTCAGCTATCAGATCCTTGCCTCCAGGCTCCTTGCCTT  50

seq1  GAGTT-CCTGCTTTAGCATCCCTAACAGTGGACTATAAAGTATAAGATAA  96
      ||||| ||||| ||||| | |||||| |||| |||| |||  ||||||||
seq2  GAGTTCCCTGC-TTAGCCTTCCTAACCGTGG-CTAT-AAGATTAAGATAA  97

seq1  AATAAACCCTGCCCTACCCAAATTATTTTTGGTCACACTTCTTATCACAG  146
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  AATAAACCCTGCCCTACCCAAATTATTTTT-GTCACACTTCTTATCCCAG  146

seq1  AAGTAGGAAGTAAACTAGGACACACAAAACAAACA-CACGAAAAGCATAT  195
      ||||||  |||||||||||| |||| ||||||||| ||||||||||||||
seq2  AAGTAG--AGTAAACTAGGA-ACAC-AAACAAACACCACGAAAAGCATAT  192

seq1  CAGGTTAAGCCCTGCCATGCACTTGCAATCTGAATCTTGCAATGATCTTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAAGCCCTGCCATGCACTTGCAATCTGAATCTTGCAATGATCTTT  242

seq1  CCTATGTACGAGCTCATCTGAAACCTCACTGAATGTTGAACACATAGCAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTACGAGCTCATCTGAAACCTCACTGAATGTTGAACACATAGCAT  292

seq1  CTATTTTACTATAGTTTGTTTCACAAGAGAAAATAGAGGATCTGAGAAGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTACTATAGTTTGTTTCACAAGAGAAAATAGAGGATCTGAGAAGT  342

seq1  GGTACCTATCAGTGAGCAACAC-AAGAAGGAAGCGTCTGAGCTCCTTTGT  394
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGTACCTATCAGTGAGCAACACAAAGAAGGAAGCGTCTGAGCTCCTTTGT  392

seq1  TTGACTCCCATATTTCCGTACTCCTTTTCATGCCTTCACC-AATAGCTTT  443
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGACTCCCATATTTCCGTACTCCTTTTCATGCCTTCACCAAATAGCTTT  442

seq1  AGGCACAGACAGACCAAGAATCATTTGTACATAAATGTCTGGGAATCCTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGACAGACCAAGAATCATTTGTACATAAATGTCTGGGAATCCTC  492

seq1  CTGTAGGCGAATTATCAGAGAATCAGTCCTATCAACCATTGCGATCATTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGCGAATTATCAGAGAATCAGTCCTATCAACCATTGCGATCATTC  542

seq1  CACTTACAATTCCTCAATACCATAGTCAACTTTATTAGTTCATGGTCCTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACAATTCCTCAATACCATAGTCAACTTTATTAGTTCATGGTCCTT  592

seq1  GTCAACATGTCTTAGATCAGACTCCAGAAAACCAAGTCACCACCTACAGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACATGTCTTAGATCAGACTCCAGAAAACCAAGTCACCACCTACAGT  642

seq1  TGAGAATGGCTGCTTCTACGCATCTCTCTTACTGCTTCAGGAAGCCTCAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGGCTGCTTCTACGCATCTCTCTTACTGCTTCAGGAAGCCTCAG  692

seq1  AATCCTCTAATCAAAAGACTCAGAGGAAAGAAGGAAGGAAGAAAGGAAGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTAATCAAAAGACTCAGAGGAAAGAAGGAAGGAAGAAAGGAAGG  742

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAA  792

seq1  GAAAGAAAGAAAGAAAGAAAGGAAGAAAGACAGACCAATGGTCGATCCTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGGAAGAAAGACAGACCAATGGTCGATCCTG  842

seq1  AAGGTTATTGTTACACATTTGGAACCAGGAGAAAGTAGCTCTCATAGCCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTATTGTTACACATTTGGAACCAGGAGAAAGTAGCTCTCATAGCCA  892

seq1  AGAATATCTTTTGTTTAGTCTGCACGAGCTATAGAGATAGTCCTGGCTTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCTTTTGTTTAGTCTGCACGAGCTATAGAGATAGTCCTGGCTTC  942

seq1  TGATTCAGAGGCTCTTTGTAGAAAGGCTCTGTGGTGTGCAGCTTACACAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAGAGGCTCTTTGTAGAAAGGCTCTGTGGTGTGCAGCTTACACAG  992

seq1  CAGTCCTTCTTGCGGAGCATGCCCAGACCCTCCCTCTGCCTGTCCAGCAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTCTTGCGGAGCATGCCCAGACCCTCCCTCTGCCTGTCCAGCAG  1042

seq1  TCTATGGTGCTCTTCACACCGCTGCCATCTTGAACTACCATCCATTTCAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGTGCTCTTCACACCGCTGCCATCTTGAACTACCATCCATTTCAC  1092

seq1  GGCCTGACAATTCCTATGCTCCATTTAGGTCTCTCAACAGCCCTGAGAAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGACAATTCCTATGCTCCATTTAGGTCTCTCAACAGCCCTGAGAAT  1142

seq1  TC  1145
      ||
seq2  TC  1144

seq1: chr6_125956541_125957586
seq2: B6Ng01-014J04.g_66_1107

seq1  GAATTCACTTTCCTGACAATTAACCTTGTCCTATAATGACATTAACCCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTCCTGACAATTAACCTTGTCCTATAATGACATTAACCCGT  50

seq1  CGCCTCTCAGCGATCCGGTTCTAACACACAAATTCAGTGAGCAGTAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCTCAGCGATCCGGTTCTAACACACAAATTCAGTGAGCAGTAGAGC  100

seq1  ACATTCAAACCGCAGCACAGATGGTCTTTGCTTTCTCTTGGTGAGCACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAAACCGCAGCACAGATGGTCTTTGCTTTCTCTTGGTGAGCACGA  150

seq1  AGTCTATGGGTGGACTTCGTTCCATAGATAAATGCTTGTTGAATGACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGGGTGGACTTCGTTCCATAGATAAATGCTTGTTGAATGACTGG  200

seq1  CAGATGAAGTGAGGGAGTGGGTAGTGAACGGTGAAGATTGACAGGTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAAGTGAGGGAGTGGGTAGTGAACGGTGAAGATTGACAGGTCACA  250

seq1  TGTCTGTCACACATGCTGCTGCTTTCCCCAGCATCAGAACCCAGGGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCACACATGCTGCTGCTTTCCCCAGCATCAGAACCCAGGGCTGA  300

seq1  AGACATGGCCTGCACCCCTCCCTTCCCATTGCTCTGTCTATTCTCAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGCCTGCACCCCTCCCTTCCCATTGCTCTGTCTATTCTCAGCCA  350

seq1  CCAACACTCCCAAGTCCTTGTGTTTGTCACCAGACACTCTTAGAAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTCCCAAGTCCTTGTGTTTGTCACCAGACACTCTTAGAAGAAAA  400

seq1  GGATGGTGGAGCATATCTTTAAAATGAGGGCTTGAGAAATGACAGCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTGGAGCATATCTTTAAAATGAGGGCTTGAGAAATGACAGCACTG  450

seq1  AATTAGCACCACGTGCTTTTCCAAGACCATTCAGCAGAACAAACGGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCACCACGTGCTTTTCCAAGACCATTCAGCAGAACAAACGGACCA  500

seq1  CATACCCTCCCTTCCCCGTCTTGCTCACCACTGGTTCACAAAAAGGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCTCCCTTCCCCGTCTTGCTCACCACTGGTTCACAAAAAGGATGA  550

seq1  CCCTGAAGGACCAGGTTTCCTTCTCGTTTTTCTTAAGATAAAAATGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAGGACCAGGTTTCCTTCTCGTTTTTCTTAAGATAAAAATGTAGA  600

seq1  GGAAAAAAAATCTAGCAGTAGAGATTAATGCAAAGACTAACTAGACAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAATCTAGCAGTAGAGATTAATGCAAAGACTAACTAGACAAAT  650

seq1  GTAGCAAGGAGCAACGAAGTCAAAGTCTTCGTGGCAATGCTTAAGATCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAGGAGCAACGAAGTCAAAGTCTTCGTGGCAATGCTTAAGATCGA  700

seq1  GTTTTCCAGTTCTCCTGTGACATTTGAAAGCATGAGATAAAACGCGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCAGTTCTCCTGTGACATTTGAAAGCATGAGATAAAACGCGTTTG  750

seq1  ATGTCCTGAGTTTATTATAGTCTAACTGAACCACTGCATTTCCAGTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTGAGTTTATTATAGTCTAACTGAACCACTGCATTTCCAGTCAAG  800

seq1  CTCCCT-GGAAGAGCATTGTGAACCTCAGTGGGACAATGGTAGCACAGAG  849
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGGAAGAGCATTGTGAACCTCAGTGGGACAATGGTAGCACAGAG  850

seq1  TCCCAAACACAACCTCACCAGACAACGCAGTTCCCAGCTGCTTCTGTTAT  899
      |||||||||||| |||| ||||| ||||||||||||||||||||||||||
seq2  TCCCAAACACAA-CTCA-CAGAC-ACGCAGTTCCCAGCTGCTTCTGTTAT  897

seq1  TTCTGAGAGTCCTTCCTTGGTCTTCCTCAGTTCTCACCTCCATTTTTCTC  949
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  TTCTGAGAGTCCTTCCTTGGTCTACCTCAGTTCTCACCT-CATTTTTCTC  946

seq1  TCAGAGGATCTAACTCGTACTTATCAGACATTTCTTGCAAACTTACCAGA  999
      ||||||||||| ||||||||||||||||||||   ||| |||||||||||
seq2  TCAGAGGATCT-ACTCGTACTTATCAGACATT--CTGC-AACTTACCAGA  992

seq1  CAGGACA-GGTCA-TTTGCCTGTTTTCTTTTATATCCTT-GTTTTTACTA  1046
      ||||||| ||||| ||||||||||||||||||||||||| ||||||||||
seq2  CAGGACAGGGTCATTTTGCCTGTTTTCTTTTATATCCTTGGTTTTTACTA  1042