BAC Information

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BAC

Clone NameB6Ng01-014O08
Chromosome6 (Build37)11 (Build37)
Map Location 18,835,448 - 18,835,96826,449,795 - 26,450,869
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014O08.bB6Ng01-014O08.g
ACCDH849310DH849311
length9561,069
definitionDH849310|Mus musculus domesticus DNA, BAC clone: B6Ng01-014O08, 5' end.DH849311|Mus musculus domesticus DNA, BAC clone: B6Ng01-014O08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(26,449,795 - 26,450,869)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
attctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtcattcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcatgcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttaacatat
agatctttcacttccttagttagagtcactccgagatattttatattatt
tgtgac
gaattctatgccccactttagagcctcagtgcctagaggagtgaaggaaa
ggtgcaggaagacaagtcagatgcaaggcatgggacagtatggtgcaatg
gattcctagtcttcacacactgaagtgtaagtgaaatatgtgcttcatta
ctctgcacctacagaaggtaaagtgagaagtatttttttataagacaaat
acaagaatataaatatacgaacaaaacttaccagctttatgacatgtctt
gcatctttgtttggtttatttgtggggaaagctgaagggaaaaaaggaca
attggaaaataatagttattccaaatctttgaatatctatcgtatcacag
agaaatcatagatcttttagtaagtaaagtagattatacacaaagcctct
tataactgtgctaccatctctactatacaaaaggtgctattgaagctgag
gaaatggaataaacttctcacgaagaaaaatagattgaagtctgaaactt
ttatctggcacaggacacattacttaacatagtctatattcaagcactca
gacgtgggaaataaacagataacattaaacacatcatccaagtatagggg
aaggtaagaaagctaaaacagatgtgattgaacttgtgaaaggtgtctca
aggatatagttcttacatccacatcagagtggacttctcattgatcaagt
tgcccaaatgagccatgtttctgtaaagaccactcatccattctcttgta
aggagttccatatccatgcttctaaaagtaaccccaacaaactcattggt
ctgctaaactggttttgagtggactctttgctttggtgtatccctgtcat
tatattagggtttcaccaggaagtgacatagaatatatgatgtatgaaca
ctactcaaaccaaagatacagatagaaaaattgcaatgaatgataatata
tacactaatggctgatctatcagtctgtgggtggatggcagaaggggcat
cctgatatagctgcctttacccatgtttgtaaggaatggtgtggtgtctc
cagctaggatagctgcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-014O08.b_47_568 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAATGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAATGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  AGACACTGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr11_26449795_26450869
seq2: B6Ng01-014O08.g_67_1135

seq1  GAATTCTATGCCCCACTTTAGAGCCTCAGTGCCTAGAGGAGTGAAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCCCCACTTTAGAGCCTCAGTGCCTAGAGGAGTGAAGGAAA  50

seq1  GGTGCAGGAAGACAAGTCAGATGCAAGGCATGGGACAGTATGGTGCAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGGAAGACAAGTCAGATGCAAGGCATGGGACAGTATGGTGCAATG  100

seq1  GATTCCTAGTCTTCACACACTGAAGTGTAAGTGAAATATGTGCTTCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTAGTCTTCACACACTGAAGTGTAAGTGAAATATGTGCTTCATTA  150

seq1  CTCTGCACCTACAGAAGGTAAAGTGAGAAGTATTTTTTTATAAGACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCACCTACAGAAGGTAAAGTGAGAAGTATTTTTTTATAAGACAAAT  200

seq1  ACAAGAATATAAATATACGAACAAAACTTACCAGCTTTATGACATGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAATATAAATATACGAACAAAACTTACCAGCTTTATGACATGTCTT  250

seq1  GCATCTTTGTTTGGTTTATTTGTGGGGAAAGCTGAAGGGAAAAAAGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTGTTTGGTTTATTTGTGGGGAAAGCTGAAGGGAAAAAAGGACA  300

seq1  ATTGGAAAATAATAGTTATTCCAAATCTTTGAATATCTATCGTATCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAAATAATAGTTATTCCAAATCTTTGAATATCTATCGTATCACAG  350

seq1  AGAAATCATAGATCTTTTAGTAAGTAAAGTAGATTATACACAAAGCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCATAGATCTTTTAGTAAGTAAAGTAGATTATACACAAAGCCTCT  400

seq1  TATAACTGTGCTACCATCTCTACTATACAAAAGGTGCTATTGAAGCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGTGCTACCATCTCTACTATACAAAAGGTGCTATTGAAGCTGAG  450

seq1  GAAATGGAATAAACTTCTCACGAAGAAAAATAGATTGAAGTCTGAAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAATAAACTTCTCACGAAGAAAAATAGATTGAAGTCTGAAACTT  500

seq1  TTATCTGGCACAGGACACATTACTTAACATAGTCTATATTCAAGCACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGGCACAGGACACATTACTTAACATAGTCTATATTCAAGCACTCA  550

seq1  GACGTGGGAAATAAACAGATAACATTAAACACATCATCCAAGTATAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGGGAAATAAACAGATAACATTAAACACATCATCCAAGTATAGGGG  600

seq1  AAGGTAAGAAAGCTAAAACAGATGTGATTGAACTTGTGAAAGGTGTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAGAAAGCTAAAACAGATGTGATTGAACTTGTGAAAGGTGTCTCA  650

seq1  AGGATATAGTTCTTACATCCACATCAGAGTGGACTTCTCATTGATCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATAGTTCTTACATCCACATCAGAGTGGACTTCTCATTGATCAAGT  700

seq1  TGCCCAAATGAGCCATGTTTCTGTAAAGACCACTCATCCATTCTCTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAATGAGCCATGTTTCTGTAAAGACCACTCATCCATTCTCTTGTA  750

seq1  AGGAGTTCCATATCCATGCTTCTAAAAGTAACCCCAACAAACTCATTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTCCATATCCATGCTTCTAAAAGTAACCCCAACAAACTCATTGGT  800

seq1  CTGCTAAACTGGTTTTGAGTGGACTCTTTGCTTTGGTGTATCCCTGTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAACTGGTTTTGAGTGGACTCTTTGCTTTGGTGTATCCCTGTCAT  850

seq1  TATATTAGGGTTTCACCAGGAAGTGACATAGAATATATGATGTATGAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGGGTTTCACCAGGAAGTGACATAGAATATATGATGTATGAACA  900

seq1  CTACTCAAAACCAAAGATAACAGATAGAAAAAATTGCAATGAATGATAAT  950
      |||||| ||||||||||| |||||||| ||||||||||||||||||||||
seq2  CTACTC-AAACCAAAGAT-ACAGATAG-AAAAATTGCAATGAATGATAAT  947

seq1  ATATACAACTAATGGCTGATCTATCAGTCTGTGGGTGGAATGGCAGAAGG  1000
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  ATATAC-ACTAATGGCTGATCTATCAGTCTGTGGGTGG-ATGGCAGAAGG  995

seq1  GGCAATCCTGATATAGCTGCCTTTACCCATG-TTGTAAGGGATGGTGTGG  1049
      ||| ||||||||||||||||||||||||||| |||||||| |||||||||
seq2  GGC-ATCCTGATATAGCTGCCTTTACCCATGTTTGTAAGGAATGGTGTGG  1044

seq1  TGTCTCCAGGTAGTGATAGCTGCATG  1075
      ||||||||| ||| ||||||||||||
seq2  TGTCTCCAGCTAG-GATAGCTGCATG  1069