BAC Information

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BAC

Clone NameB6Ng01-014O15
Chromosome6 (Build37)
Map Location 14,508,442 - 14,509,425
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem168, B630005N14Rik, Gpr85, 2610001J05Rik, LOC100041043, LOC100040513, LOC667797
Downstream genePpp1r3a, Foxp2, LOC100040568
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014O15.bB6Ng01-014O15.g
ACCDH849324DH849325
length9781,185
definitionDH849324|Mus musculus domesticus DNA, BAC clone: B6Ng01-014O15, 5' end.DH849325|Mus musculus domesticus DNA, BAC clone: B6Ng01-014O15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgctatccaaggcgaatgagacacataaataatgaacactatt
cctgacaagggtgacctgctgggcactgagctggggcaatgagtgctttc
acttgaaataatcatgattgtcattaagtgcaaccttaacatcatcttct
ggcatctattcttccttattgtcctcttagatatccatcattacttttag
tgttataggtaaagtagtggatatacgtgaccaacactctgaagtcagag
gcaggaagattgtgagttggaggccagtctagactacacagggagacttt
ctggaagaacagagagaaatctgtaattgtaatgatacaaataaaaattt
acattaaaaatgctcattttatatttttcaattagatgtcactctattac
taccccttttaagtgtttacaaacaaaactagcctatgtcttctccatac
agatataggagcagaatgtttagaacacagtttaaaaagcatcagcttca
gtacttatgttcataatgtttggcaaaatggtcataacaatgcctacctt
cttttttttattaggtatttacttcatttacatttccaatgctatcccaa
aagtcccccacatgctcccccacccacccactcctacttcttggccctgg
cattcccctgtactgaggcatataaagtttgcactaccaatgggcctctc
tttccagtgatggcccactaggccatcttctgatacatatgcagctagag
acatgagctccggggttggggaggtactggttagttgattttgatgttcc
acctatagggttgcagatccctccagctccttgggtactttctagctcct
ccattgggggccctgttgatccattccatagctgactggtgagcatccac
ttctgtgtttgctagccggcatagtcttacaagagacagctctatctggt
ctttcagcaatcttgctagtgtatgcaa
gaattccatttcctttctcaatacccaaggcgtgtcctattatggtaact
catttaaaagaccgaatttttacaatccctttacatgtgcatgataggaa
gtcatttgctttcttcctacctaatttcaatagaagtttgtcaaataagg
agacatcattggagagtcatgttacaaggaatgttgaatggtcatatctt
attccaatatcttatacaacaaccattagaaataacttgtaagctgtttt
ctcactgtataatttaccattataagaattaccattattgactgattcag
atacaaatactttagaaaaatgtttgatgaagttaataaaattttgcgtt
tctggggattacaaattgctactggaaaaaaaatacaaagaggagattat
attaattatctaggatatgagatagatcttcaaaagtttagttcacagaa
ggtacaaatgaggagagaccaattgagaactcttagtgatttttgaaaat
tgataagagacattaattggctaaggtccataactagattagctactcaa
gtgctaaataatttacttcaaaccctacaaagtgataaattatcagctga
ggtggaaaaatattggccctggtagaaaagaaattacagtgagtacatat
agatcatttgaatccaaagataccttgtattttagttattttaccttcta
attctcccacagaaattcttatgcagagagaagataatgtcttagaatgg
atagcttcatcacacagagtaaaaagaattaaatacccatatagaaaata
tttctgaattgattctgaaaggcaaaatgagacaataattaggaaaagaa
ccattagaaattgtactaccttttactaatgtagaatgccttattagggg
cacaaaacaacattagcaaaggcttgcagtatgtttatgggagaataaaa
caatacccccaaaacaagagacttcagctaaaactagtgatctcattaat
attgtaacggacaccattttctgagctgtaattcttatgatataatagtc
agacgcagttaagtcagtaaaataaatggttccgagcctatattcatgaa
atccaggtctagcatcttccgtaatatcagttcggatctattaggttagg
ctcatgtgcgaacgagagtatctgcctacttggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_14508442_14509425
seq2: B6Ng01-014O15.b_46_1023

seq1  GAATTCATGCTATCCAAGGCTAATAAGACACATAAATAATGAACACTATT  50
      |||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  GAATTCATGCTATCCAAGGCGAATGAGACACATAAATAATGAACACTATT  50

seq1  CCTGACAAGGGTGACCTGCTGGGCACTGAGCTGGGGCAATGAGTGCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAAGGGTGACCTGCTGGGCACTGAGCTGGGGCAATGAGTGCTTTC  100

seq1  ACTTGAAATAATCATGATTGTCATTAAGTGCAACCTTAACATCATCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATAATCATGATTGTCATTAAGTGCAACCTTAACATCATCTTCT  150

seq1  GGCATCTATTCTTCCTTATTGTCCTCTTAGATATCCATCATTACTTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTATTCTTCCTTATTGTCCTCTTAGATATCCATCATTACTTTTAG  200

seq1  TGTTATAGGTAAAGTAGTGGATATACGTGACCAACACTCTGAAGTCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAGGTAAAGTAGTGGATATACGTGACCAACACTCTGAAGTCAGAG  250

seq1  GCAGGAAGATTGTGAGTTGGAGGCCAGTCTAGACTACACAGGGAGACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGATTGTGAGTTGGAGGCCAGTCTAGACTACACAGGGAGACTTT  300

seq1  CTGGAAGAACAGAGAGAAATCTGTAATTGTAATGATACAAATAAAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAACAGAGAGAAATCTGTAATTGTAATGATACAAATAAAAATTT  350

seq1  ACATTAAAAATGCTCATTTTATATTTTTCAATTAGATGTCACTCTATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAAAATGCTCATTTTATATTTTTCAATTAGATGTCACTCTATTAC  400

seq1  TACCCCTTTTAAGTGTTTACAAACAAAACTAGCCTATGTCTTCTCCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTTTTAAGTGTTTACAAACAAAACTAGCCTATGTCTTCTCCATAC  450

seq1  AGATATAGGAGCAGAATGTTTAGAACACAGTTTAAAAAGCATCAGCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAGGAGCAGAATGTTTAGAACACAGTTTAAAAAGCATCAGCTTCA  500

seq1  GTACTTATGTTCATAATGTTTGGCAAAATGGTCATAACAATGCCTACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTATGTTCATAATGTTTGGCAAAATGGTCATAACAATGCCTACCTT  550

seq1  CTTTTTTTTATTAGGTATTTACTTCATTTACATTTCCAATGCTATCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTATTAGGTATTTACTTCATTTACATTTCCAATGCTATCCCAA  600

seq1  AAGTCCCCCACATGCTCCCCCACCCACCCACTCCTACTTCTTGGCCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCCCACATGCTCCCCCACCCACCCACTCCTACTTCTTGGCCCTGG  650

seq1  CATTCCCCTGTACTGAGGCATATAAAGTTTGCACTACCAATGGGCCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCCTGTACTGAGGCATATAAAGTTTGCACTACCAATGGGCCTCTC  700

seq1  TTTCCAGTGATGGCCCACTAGGCCATCTTCTGATACATATGCAGCTAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTGATGGCCCACTAGGCCATCTTCTGATACATATGCAGCTAGAG  750

seq1  ACATGAGCTCCGGGGGTTGGGGAGGTACTGGTTAGTTGATATTGATGTTC  800
      ||||||||||| |||||||||||||||||||||||||||| |||||||||
seq2  ACATGAGCTCC-GGGGTTGGGGAGGTACTGGTTAGTTGATTTTGATGTTC  799

seq1  CACCTATAGGGTTGCAGATCCCTCCAGCTCCTTGGGTACTTTCTAGCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATAGGGTTGCAGATCCCTCCAGCTCCTTGGGTACTTTCTAGCTCC  849

seq1  TCCATTGGGGGCCCTG-TGATCCATCCAATAGCTGACT-GTGAGCATCCA  898
      |||||||||||||||| |||||||| | |||||||||| |||||||||||
seq2  TCCATTGGGGGCCCTGTTGATCCATTCCATAGCTGACTGGTGAGCATCCA  899

seq1  CTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTCTATC  948
      ||||||||||||||||   |||||||||||| ||||||||||||||||||
seq2  CTTCTGTGTTTGCTAG---CCGGCATAGTCTTACAAGAGACAGCTCTATC  946

seq1  TGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAA  984
      |||   ||||||||  ||||||||||||||||||||
seq2  TGG--TCTTTCAGC--AATCTTGCTAGTGTATGCAA  978