BAC Information

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BAC

Clone NameB6Ng01-015E02
Chromosome6 (Build37)
Map Location 18,836,005 - 18,836,467
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015E02.bB6Ng01-015E02.g
ACCDH849565DH849566
length1,165850
definitionDH849565|Mus musculus domesticus DNA, BAC clone: B6Ng01-015E02, 5' end.DH849566|Mus musculus domesticus DNA, BAC clone: B6Ng01-015E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaaaaaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcaatctggcggttcctc
agaaaattggacatagtactaccagaggatccagcaatacctctcctggg
catatatccagaagaagccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagagcatcatcctgagtgaggtaacacaatcacaa
aggaactcacacaatatgtactcactgataagtggatactagcccaaaac
ctaggatacccacgatataagatacaatttcctaaacacatgaaactcaa
gaaaaatgaagactgaagtgtggacactatgcccctccttagaagtgcga
acaaaacacccatggaaggagttacagaaacaaagtatggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttactgaa
aggacccagatgtagctttctcttgtgagactatgccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggaatggatcacagggctccc
attggaggagctagagaaagtacccaagagctaatggatctcaaccctat
agttgtacaacattatgactacagtacccctgagctctgactctagctgc
atttgttattcaaaagaatggcctagtcgcatcacttgtaagaagcccat
tgacacgcgaactttgtgtccccgtacagtaacccagcccaagtatgtga
gaatgtgtgggtcag

gaattccacattctgagtaacagcctgctcatgaaagtgacagaaataaa
caattatggtgcatattgatgttaagaaactggaactagaaggttgtgtt
ggagaaatgcctaggttgataaatacgtgtcaaatgaggaaccatgtact
tatctccaaacccatatgcaaagtagggtacagtagctcacagtggcaat
ccctactcctgagagatgtgagaaggagattagtcttccttcttcttgag
tttcatgtgttttgaaaattgtatattgggtattctaagtttctgggata
atatatgcttatgagtgagtgcatatcatgtgtgttcttttgtgattggg
ttacctcactcaggatgatatcctccagatccattcatttgtctaagaat
ttcataaattcattgtttttaatagctgagtagtactccattttgtcaat
gtaccacattttctctatccattcttctgttgagggacatctgggttctt
tccagtttctggctattataaataagggtgctatgaacatagtggaacat
gtgtccttattacaagttggaacatcttctgggtatatgcccaggagtgg
tattgctggatcttctggtagtattatgtccaattttctgaggaaccgcc
agactgatttccagagtggttgtaccagctttgacatcccaccagcaatg
gaggagtgttcctctttctccacatcctcgccagcatgtactgtcacctg
aaatttttgatcttagccattctgactggtgtgaggtggaatctcagagt
tgtttttgatttgcatttccctgatgattaaaagatgttgaacatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18836005_18836467
seq2: B6Ng01-015E02.g_451_917 (reverse)

seq1  AAAAAATGTTCAACATC-CTTAATCATCAGGGAAATGGAAATC-AAAACA  48
      |||||||||||||||||  |||||||||||||||||| ||||| ||||||
seq2  AAAAAATGTTCAACATCTTTTAATCATCAGGGAAATGCAAATCAAAAACA  50

seq1  ACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAA-TT  97
      || |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACTCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTT  100

seq1  CAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTC  147
      |||||||||| | ||||||||| |||||||||||||||||||||||||||
seq2  CAGGTGACAGTACATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTC  150

seq1  CATTGTTGGTGGGAT-TGCAGGCTTGTACAACCACTCTGGAAATCCGTCT  196
      ||||| ||||||||| |  | ||| |||||||||||||||||||| ||||
seq2  CATTGCTGGTGGGATGTCAAAGCTGGTACAACCACTCTGGAAATCAGTCT  200

seq1  GGCGGTTGCTCAGAAAATTGGACATAGTACTACTGGAGGATCCAGCATTA  246
      ||||||| |||||||||||||||||| ||||||  || ||||||||| ||
seq2  GGCGGTTCCTCAGAAAATTGGACATAATACTACCAGAAGATCCAGCAATA  250

seq1  CCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACAC  296
      || |||||||||||||| ||||||||||  |||||| |||| ||||||||
seq2  CCACTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACAC  300

seq1  ATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGA  346
      ||| |||||||||||||||||| ||||||||||||||||||||| |||||
seq2  ATGTTCCACTATGTTCATAGCACCCTTATTTATAATAGCCAGAAACTGGA  350

seq1  AAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAC  396
      ||||||||||||| ||||||||||| ||||||||| ||||||||||||||
seq2  AAGAACCCAGATGTCCCTCAACAGAAGAATGGATAGAGAAAATGTGGTAC  400

seq1  ATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA  446
      ||| ||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTGACAAAATGGAGTACTACTCAGCTATTAAAAACAATGAATTTATGAA  450

seq1  ATTCCTAGCCAAATGGA  463
      |||| ||| |||||| |
seq2  ATTCTTAGACAAATGAA  467


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