BAC Information

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BAC

Clone NameB6Ng01-016A24
Chromosome6 (Build37)
Map Location 19,623,867 - 19,624,580
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016A24.bB6Ng01-016A24.g
ACCDH850148DH850149
length7431,072
definitionDH850148|Mus musculus domesticus DNA, BAC clone: B6Ng01-016A24, 5' end.DH850149|Mus musculus domesticus DNA, BAC clone: B6Ng01-016A24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagaaagcttacaaggacaaaggcaaaaaaacaggactgataa
aacatctcagcatatttgggttgatgactctgaacatggaccacaaattt
ggaagagcagaacccacgctcactttggcagatgaaaaccacccattccc
cctttccctcaaatggagagaatgagacaataaacctgaccacggatgag
agctgcctgtgttctgggatgagaggctcgctctcagagctgcctgtgtt
ctgggatgagaggctcgctctcagagctgtctgtgttctggggttaggat
atttggagataactcaatgatcaattccttaattttaagaagaagaaact
gatagaagtcacccaaagggtgctctttctattctcagcttaggatggaa
ccgccaacctgacaactgtctgggaaaaggcaggggtaggtaggggtggg
taggactcatgaagtatcatcatttcccatttctatagggaatacctgtg
acaagagtctcgacagaatcctcagattacatccaaaagacttataattt
aaagagatttctaattataataagttagaacaataactgggatccttata
gagaaacatagaaacaatatctctaatgatttcactaggaacaagcctca
gcattcatattgtgtgtatgtgtgtgtgtgtgtttgtatatatgtgtgcc
aattaaagtgcatacaacgatacatgtggatgtgagaaaaata

gaattcttcagggttgagggataatccagactctagcttcaccatcctat
cttcttgctattccggcagagcataagggtaagggtggaggatggaccat
gggctttgaaggtcaaatgcttgtatcagtcactttctgtggtttctgac
aaatgacttaatttctttgagtcttggtttttctctttgtaaaatagaat
agataacagtaatgtgtccattctttctcccctctcccccctttttttgg
gtgaggattaatcatgattacaacattgtgaacacaaataaagataaaag
cgtggggctgaagatagtgaaagtgaaaagtgttggtgaatggggggggg
cgtagaaaaaaaatcttttgtgtggtcaaattaatatatatttagttctc
attgtgatccctttcatatatttattttgaactcaaaattttaaatccaa
actatgcattacattaataaaagttgagtcaacaagcaggacacatttgc
tggaacaacattgaccagaacatgctaaaggagacctgtgtggaaaaaag
attagtaatactacaaatagactttgtctctgttatatacagacatattg
agataaaacatattggcctctatggtgtgcctagaaaagttgtcatttca
gagaaatgctaccaagtgacatggatagataacagtttcccaaaccaagt
cagatgaatatttaactaggcaacatactcaaaagaaaatagaaaccata
attcctgctgagaaaggcaagctgtatattatgctcctatagatggaacg
tggtaagcacactggcctggaattttggctctgagatgctcaaggaatga
gctgtgagatactaatgaccgctcttatggggactttatgaatgggcaag
tggtacccagtatgtgtttcttcgaattccccaattataaacaactagtc
atttaaaacagtactagaaactgttttaagctgtctgggtttagttgtga
agaacttagtcatttaagtagaaaaagtccctattgttgatattctgcat
caccctcctggtagttaaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19623867_19624580
seq2: B6Ng01-016A24.g_415_1135

seq1  GTAGAAAAAAAATCTTTTGTGTGGTCAAATTAATATATATTTAGTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAAAAATCTTTTGTGTGGTCAAATTAATATATATTTAGTTCTCA  50

seq1  TTGTGATCCCTTTCATATATTTATTTTGAACTCAAAATTTTAAATCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATCCCTTTCATATATTTATTTTGAACTCAAAATTTTAAATCCAAA  100

seq1  CTATGCATTACATTAATAAAAGTTGAGTCAACAAGCAGGACACATTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCATTACATTAATAAAAGTTGAGTCAACAAGCAGGACACATTTGCT  150

seq1  GGAACAACATTGACCAGAACATGCTAAAGGAGACCTGTGTGGAAAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAACATTGACCAGAACATGCTAAAGGAGACCTGTGTGGAAAAAAGA  200

seq1  TTAGTAATACTACAAATAGACTTTGTCTCTGTTATATACAGACATATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAATACTACAAATAGACTTTGTCTCTGTTATATACAGACATATTGA  250

seq1  GATAAAACATATTGGCCTCTATGGTGTGCCTAGAAAAGTTGTCATTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAACATATTGGCCTCTATGGTGTGCCTAGAAAAGTTGTCATTTCAG  300

seq1  AGAAATGCTACCAAGTGACATGGATAGATAACAGTTTCCCAAACCAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCTACCAAGTGACATGGATAGATAACAGTTTCCCAAACCAAGTC  350

seq1  AGATGAATATTTAACTAGGCAACATACTCAAAAGAAAATAGAAACCATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATATTTAACTAGGCAACATACTCAAAAGAAAATAGAAACCATAA  400

seq1  TTCCTGCTGAGAAAGGCAAGCTGTATATTATGCTCCTATAGATGGAACGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTGAGAAAGGCAAGCTGTATATTATGCTCCTATAGATGGAACGT  450

seq1  GGTAAGCACACTGGCCTGGAATTTTGGCTCTG-GATGCTCAAGGAATGAG  499
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGTAAGCACACTGGCCTGGAATTTTGGCTCTGAGATGCTCAAGGAATGAG  500

seq1  CTGTGAGATACTAATGACCGCTCTTAT-GGGACTTTATGAAT-GGCAAGT  547
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  CTGTGAGATACTAATGACCGCTCTTATGGGGACTTTATGAATGGGCAAGT  550

seq1  -GTAACCAGTATGTGTT--CTCGAAATCCCCAAATATAAACAACTAGTCA  594
       ||| ||||||||||||   ||||| ||||||| ||||||||||||||||
seq2  GGTACCCAGTATGTGTTTCTTCGAATTCCCCAATTATAAACAACTAGTCA  600

seq1  TATAAAACAGTACTAGAAACTGTTTTAAGCTGTCTGGGGTTTTAGTTGTG  644
      | ||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  TTTAAAACAGTACTAGAAACTGTTTTAAGCTGTCTGGG--TTTAGTTGTG  648

seq1  -AGAACTTAGTCATTTTAGAAG-AAAAGTCCC-ATTGGTGAT-CTCTGCC  690
       ||||||||||||||| || || ||||||||| |||| ||||  |||| |
seq2  AAGAACTTAGTCATTTAAGTAGAAAAAGTCCCTATTGTTGATATTCTG-C  697

seq1  AGCACCCTCTTGTAATTTAAAGCA  714
      | ||||||| ||  | ||||||||
seq2  ATCACCCTCCTGGTAGTTAAAGCA  721


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