BAC Information

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BAC

Clone NameB6Ng01-016E04
Chromosome6 (Build37)
Map Location 18,835,448 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016E04.bB6Ng01-016E04.g
ACCDH850278DH850279
length933853
definitionDH850278|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E04, 5' end.DH850279|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccatttttaatggggttattcgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacagtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctagatcttacagcacatgccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggattgattcac
attcttctacatgataacacccagttgtgccagcaccaattgttgaaaat
gctgtctttattccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgaaaagactttttgctatcctaggttttttgttattccagatg
aatttgcagattgctccttctaattcgttgaagaatagagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgtttatcctgcaaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgcc

gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattaccgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttccttacttgagcaaattaacacatctccgggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctatgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt
gaaagataagttattgcacctggcccctcttcaaccaagaaagaagacaa
cgtttagtgggtctatttggattctggagacacacatccctaatagggtg
tga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-016E04.b_47_568 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAATAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      || ||||||| |||||||||||||||||| |||||||||||||||| |||
seq2  GGGTGTTATCATGTAGAAGAATGTGAATCAATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGT-GGGGAAAAGCCTTGAAGATATGGGC  249
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGGAAAAGCCTTGAAGATATGGGC  250

seq1  AGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTA  298
      | ||||||||| ||||||||||||||||||||||| |||||||| || | 
seq2  ACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCATGTGCTGTAAGATC  300

seq1  GAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  348
       ||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  350

seq1  AAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATC  398
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACTGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATC  400

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  450

seq1  ACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGG  498
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  ACTCAAGAAGGTGGACTTCAGAAAATCGAATAACCCCATTAA-AAATGGG  499

seq1  GCTCAGAACTGAACAAAGAATTC  521
      |||||||||||||||||||||||
seq2  GCTCAGAACTGAACAAAGAATTC  522


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