BAC Information

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BAC

Clone NameB6Ng01-016I09
Chromosome6 (Build37)
Map Location 18,835,427 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016I09.bB6Ng01-016I09.g
ACCDH850462DH850463
length9471,091
definitionDH850462|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I09, 5' end.DH850463|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagtagtttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcctaatctgttggtggtct
ttatgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttcaactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaactctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtctggcatggtgattccaccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgaccatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagttttatcatac
agatctttcacttccttagttagagtcacgccagatattttatatta

gaattcaatccacaggtatttagggcttatagttattcaaaaatctaaca
aaactaaattcaaagaaaaaaattttaaacattaataaatgtaacagaaa
agcaagcaaccataggacatttcaaatggtggcatggaattagaacaaaa
gggatatttagaataatgagtaacacttcaaaattaatgacaaacattaa
gtcaccagtccaagaaactatcagaaacaaactgggcatagataatatct
ccctctttactccaagaatctacatagtagcttgaataaaaatggcccct
atagactcgaagatttaatgatgtgatcaccagagagtggcactatttga
aagaagtgggaagtatggtctttgtttaagaagtatatcattggtagtag
gctttgagggttcaagagaccaagtcaggcccttggtttcatcttcctga
tacctgcagcttcagatgtagaactctcagtgacttcttcagtacatgtc
tgtctgtttatcaccaccatttttaccatgatgagaatggattaaacctc
tgaaaacgtatacatgccccaattaaaagctttctttgtaagagttatga
tgatcatgctgtctcttcacagcaaaagaacactggctaaaacaaatgtt
cctaccagcaatagggatattgctgtcaaaggcttgataatgactggttg
ttggtggaatgtgtactttggaactttagattagaatagcagttaaatgc
tttaaatgggacttaatggaccatagtactaagaacacagaagagattgc
ttgagggtgactttgaactatgggtcccaactcaagaagtttcaaagaag
aagaagaatgttagtaagtggtctagaaaaattcttatggtatactggca
aaggatatggctgctttttgccatcatcctaaaagtttgcctaggctaaa
tgagagtttagataatgcattagcagaggaatttcaaacacgtagtattg
actggttctattgtatagtagtcctcttttgcagtctatatgacaagacc
aaggttagcaggtaaaatataatgtccaatttggagagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835427_18835968
seq2: B6Ng01-016I09.b_49_591 (reverse)

seq1  AATAGAATTGAAGACCCAGAGATGAACCCACACACCTATGGTCACTTGAT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTTGAAGACCCAGAGATGAACCCACACACCTATGGTCACTTGAT  50

seq1  CTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCA  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTCGACAAGGGAGCTAAAACCATCCAGTTGAAGAAAGACAGCATTTTCA  100

seq1  ACAATTGGTGCTGGCACAACTGGTTGTTATCTTGTAGAAGAATGTGAATC  150
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  ACAATTGGTGCTGGCACAACTGGTTGTTATCGTGTAGAAGAATGCGAATC  150

seq1  GATCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGA  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGA  200

seq1  ACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGA  250

seq1  AAAGCCTTGAAGATATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCA  300
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  AAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCA  300

seq1  ATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGAAACT  349
      ||||| |||||||| || | |||||| |||||||||||||||||||||||
seq2  ATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACT  350

seq1  CCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCAC  399
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACATAAAGACCAC  400

seq1  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  449
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGATTAGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  450

seq1  ATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAA  499
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  ATATCCAACATATATAAACTACTCAAGAAGGTGGACTTCAGAAAATCAAA  500

seq1  TAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  542
      |||||||||||| ||||||||||||||||||||||||||||||
seq2  TAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  543


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