BAC Information

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BAC

Clone NameB6Ng01-017K10
Chromosome6 (Build37)
Map Location 72,697,155 - 72,889,358
singlet/doubletdoublet
Overlap geneTcf3, Kcmf1
Upstream geneReep1, Mrpl35, Immt, Ptcd3, Rpo1-4, LOC668057, St3gal5, Atoh8, Sftpb, Usp39, 0610030E20Rik, Tmem150, 2500002L14Rik, Vamp5, Vamp8, Ggcx, Mat2a, Sh2d6, Capg, Rbed1, Retsat, Tgoln1, LOC100038890
Downstream geneTmsb10, Dnahc6, Suclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017K10.bB6Ng01-017K10.g
ACCDH851274DH851275
length458694
definitionDH851274|Mus musculus domesticus DNA, BAC clone: B6Ng01-017K10, 5' end.DH851275|Mus musculus domesticus DNA, BAC clone: B6Ng01-017K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,697,155 - 72,697,618)(72,888,666 - 72,889,358)
sequence
cagagcagcaacatctaggcagtgagacccagtctcacacaaacaagaca
aattaaccatatggtaaatacattaagaattatgggctgaatgttcatgc
tcctaccaccaaattcctccgttgaaatctaatacgaccggatctggagg
tggaatctttgggaggagattaagctatggaggtaaatcctcatggctga
ggccagagagctatgctgccacgaaggaatgcagcagcagccagcagtct
gtcaccaatgcaaaccataccatgctgggaccctgacctctggtccccca
tccacccttcaaaactgtaagaaataagcagctggttggtaagcttctac
atctaggtcattatcacagcaagccacaggatttgctggcttctctgaga
gtgtaacctactgaaaaagagcattccgatgggttgggaagggtgagtga
gggggcat
gaattctcagtcagctagggccagtgtaggccagggtccagccagctatc
tcctgtagaaaaggagctacaggataatcaggccagtgacaactgtgaca
acacattcagatagaagctgccatggagaccaggctagccttgaactcat
agacatcggcctgcctttgcttactaagtgctgggattgaaggtgtgctg
gttgaagagacacttggtctcttgaagcatcttctatgatgacaagactg
acctaatcagtcccaccaggtaagaagctttacagtgtgttgcttgccgt
gccagtccaagcctaccgttaccagctcggactaaagagacacctacatc
atcacacttttcttgttctgcaaagaggcctgattgagtgcttatatatt
ccttagatttttttttagacgaaggaaaagcaaagaggaatcataaataa
gtgcccgagtgtaactgaaaagttacttttattgggggtttctcatggcc
agattctcttttgttgattttctttgtcagggtctcacacagcatagtct
ttgactctaacttgttatatagctaagatgacctagaacttttggccttc
ctgtctccatttcccaagtgctgcagtctggtttacccggtactggggac
tgaacccagggccctgcgtgtgtgagacaagcactctacaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_72697155_72697618
seq2: B6Ng01-017K10.b_36_499

seq1  GAATTCCAGAGCAGCAACATCTAGGCAGTGAGACCCAGTCTCACACAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGCAGCAACATCTAGGCAGTGAGACCCAGTCTCACACAAAC  50

seq1  AAGACAAATTAACCATATGGTAAATACATTAAGAATTATGGGCTGAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAATTAACCATATGGTAAATACATTAAGAATTATGGGCTGAATGT  100

seq1  TCATGCTCCTACCACCAAATTCCTCCGTTGAAATCTAATACGACCGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTCCTACCACCAAATTCCTCCGTTGAAATCTAATACGACCGGATC  150

seq1  TGGAGGTGGAATCTTTGGGAGGAGATTAAGCTATGGAGGTAAATCCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTGGAATCTTTGGGAGGAGATTAAGCTATGGAGGTAAATCCTCAT  200

seq1  GGCTGAGGCCAGAGAGCTATGCTGCCACGAAGGAATGCAGCAGCAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGCCAGAGAGCTATGCTGCCACGAAGGAATGCAGCAGCAGCCAG  250

seq1  CAGTCTGTCACCAATGCAAACCATACCATGCTGGGACCCTGACCTCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTCACCAATGCAAACCATACCATGCTGGGACCCTGACCTCTGGT  300

seq1  CCCCCATCCACCCTTCAAAACTGTAAGAAATAAGCAGCTGGTTGGTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATCCACCCTTCAAAACTGTAAGAAATAAGCAGCTGGTTGGTAAGC  350

seq1  TTCTACATCTAGGTCATTATCACAGCAAGCCACAGGATTTGCTGGCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATCTAGGTCATTATCACAGCAAGCCACAGGATTTGCTGGCTTCT  400

seq1  CTGAGAGTGTAACCTACTGAAAAAGAGCATTCCGATGGGTTGGGAAGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTGTAACCTACTGAAAAAGAGCATTCCGATGGGTTGGGAAGGGT  450

seq1  GAGTGAGGGGGCAT  464
      ||||||||||||||
seq2  GAGTGAGGGGGCAT  464

seq1: chr6_72888666_72889358
seq2: B6Ng01-017K10.g_62_755 (reverse)

seq1  GTCTTGGTAGAGTGCTTGTCTCACACACGCAGGGCCCTGGGTTCAGTCCC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTT-GTAGAGTGCTTGTCTCACACACGCAGGGCCCTGGGTTCAGTCCC  49

seq1  CAGTACCGGGTAAACCAGACTGCAGCACTTGGGAAATGGAGACAGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCGGGTAAACCAGACTGCAGCACTTGGGAAATGGAGACAGGAAGG  99

seq1  CCAAAAGTTCTAGGTCATCTTAGCTATATAACAAGTTAGAGTC-AAGACT  149
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCAAAAGTTCTAGGTCATCTTAGCTATATAACAAGTTAGAGTCAAAGACT  149

seq1  ATGCTGTGTGAGACCCTGACAAAG-AAATCAACAAAAGAGAATCTGGCCA  198
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGCTGTGTGAGACCCTGACAAAGAAAATCAACAAAAGAGAATCTGGCCA  199

seq1  TGAGAAACCCCCAATAAAAGTAACTTTTCAGTTACACTCGGGCACTTATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAACCCCCAATAAAAGTAACTTTTCAGTTACACTCGGGCACTTATT  249

seq1  TATGATTCCTCTTTGCTTTTCCTTCGTCTAAAAAAAAATCTAAGGAATAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTCCTCTTTGCTTTTCCTTCGTCTAAAAAAAAATCTAAGGAATAT  299

seq1  ATAAGCACTCAATCAGGCCTCTTTGCAGAACAAGAAAAGTGTGATGATGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCACTCAATCAGGCCTCTTTGCAGAACAAGAAAAGTGTGATGATGT  349

seq1  AGGTGTCTCTTTAGTCCGAGCTGGTAACGGTAGGCTTGGACTGGCACGGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCTCTTTAGTCCGAGCTGGTAACGGTAGGCTTGGACTGGCACGGC  399

seq1  AAGCAACACACTGTAAAGCTTCTTACCTGGTGGGACTGATTAGGTCAGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACACACTGTAAAGCTTCTTACCTGGTGGGACTGATTAGGTCAGTC  449

seq1  TTGTCATCATAGAAGATGCTTCAAGAGACCAAGTGTCTCTTCAACCAGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCATAGAAGATGCTTCAAGAGACCAAGTGTCTCTTCAACCAGCA  499

seq1  CACCTTCAATCCCAGCACTTAGTAAGCAAAGGCAGGCCGATGTCTATGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCAATCCCAGCACTTAGTAAGCAAAGGCAGGCCGATGTCTATGAG  549

seq1  TTCAAGGCTAGCCTGGTCTCCATGGCAGCTTCTATCTGAATGTGTTGTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGCTAGCCTGGTCTCCATGGCAGCTTCTATCTGAATGTGTTGTCA  599

seq1  CAGTTGTCACTGGCCTGATTATCCTGTAGCTCCTTTTCTACAGGAGATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTCACTGGCCTGATTATCCTGTAGCTCCTTTTCTACAGGAGATAG  649

seq1  CTGGCTGGACCCTGGCCTACACTGGCCCTAGCTGACTGAGAATTC  693
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGACCCTGGCCTACACTGGCCCTAGCTGACTGAGAATTC  694