BAC Information

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BAC

Clone NameB6Ng01-017L12
Chromosome6 (Build37)
Map Location 74,004,071 - 74,125,016
singlet/doubletdoublet
Overlap genenone
Upstream geneDnahc6, Suclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017L12.bB6Ng01-017L12.g
ACCDH851320DH851321
length1,169862
definitionDH851320|Mus musculus domesticus DNA, BAC clone: B6Ng01-017L12, 5' end.DH851321|Mus musculus domesticus DNA, BAC clone: B6Ng01-017L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,004,071 - 74,005,234)(74,124,156 - 74,125,016)
sequence
gaattctttgaagctactgtgatctgaggaaacaaattcatagagagggc
atgtatagatctagtctgaagctgaagtcatgggttttcttaacactgat
gccaactacataagatactgtggtttaaagagatccctttccagccttca
tgtcaaattgaatcttaagtgcaacaatttgggcaaggaattaaataatg
ggcacagagattttatagactaaggattaacataaaatgacttgagagaa
ggggctcactccttttctcccctctattcttcctgtcctgtgaagacaca
gcatccccatactggaaacagaatagcctttcccatctagttgaatatgc
tgggtacaatttttgagtttttctgaggttagaactataagaaacacgtt
tctgttctttataacttacataagccaagatgctttgttagagcagcatc
cacaggctgtatttggatgatcccatttgcctattagttgtggcagtgtc
cagtgctttcgggctaaagctgttcggctgagacaaactctgattttctt
ttccacattactgaattagtgcattgatgaatacagtaaacctttattga
taagtctagagtatgttgtaatgtagaaatgtacctaaaatatctagttt
ttattttggaaaatatttagttgcaaataaatatgtcaagaagtagagca
tattattatgtttattgacatctcttaaatgacaatgtgtggaaccacaa
ctttctccacataaaactccaatgaaatttttacgtttggttttccaaac
aaaattaagtcttctaccataataattttataaggtaaaacaaggtgtga
ttgaagaaacaataagtagctaacaaaagatagcaatctttttgatattc
tctaaatcatacttggtgattattctatgccttgacacttggaaatgcaa
tcagcttttaatgcattaaaaacacttttcttgtattttaaaggatgaat
atacttcttactgaaacttaacaacttattttttttcatgaacatgaaaa
tgtaaaatgattttacctggaaactttcctgaaataaatgtgaattacac
aagagggctgtgtaacctcagaattaaggtgcttgaacttctatggcagg
aggccttgatttcattctg
gaattcttcagggatgctgcacttcccaattacatcccaaacagagccac
caactagagaacaagttttcaaatacctgagcccacaagagacatttcta
attctatacaccataggaacattcaaactgtttcctattatctgttttaa
gacacaaagtgagttgtcacccatagtcatgctactgtgatacatgacat
taggtattgctgtccatatttaattctaagcctcttcccttcagcatttg
ctctatttagtctgttctaatattcttagctgctatttcatattgtctct
ataaaatcaacattttctgcagctcttacagaaaaataagcatatatagt
ctcccaaggacatgattttgatgttcaacttcctatctataaactccctt
caacgacatagctagaatctgagacattttcctccactttttgttaattg
tcacagttgattagaaataatatttaagtggaaagatggatgtgaactaa
taccagataaaacaaaaaatttaaatggaggcactttatccacatttaca
gtccatcttaagaaaatattacacaacactttattcaatgtagacagaaa
tttcacatgctgagttcattttgtttggtctgtttttgtagtgggttttt
ggttttaatatatttttggaggcaatgatagctatgcaatcgattgcatg
aaattgacttatctgaaagtgaaaaccaccagctcagatttttcctggaa
cctgaccaaaacaaaggtacttttcttctgcataaactctaaagctgaaa
gtttgcttgtaagtaagcaatctgaaggaaaactttgacagatttgtggg
aaacaatcttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74004071_74005234
seq2: B6Ng01-017L12.b_45_1213

seq1  GAATTCTTTGAAGCTACTGTGATCTGAGGAAACAAATTCATAGAGAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAGCTACTGTGATCTGAGGAAACAAATTCATAGAGAGGGC  50

seq1  ATGTATAGATCTAGTCTGAAGCTGAAGTCATGGGTTTTCTTAACACTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAGATCTAGTCTGAAGCTGAAGTCATGGGTTTTCTTAACACTGAT  100

seq1  GCCAACTACATAAGATACTGTGGTTTAAAGAGATCCCTTTCCAGCCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTACATAAGATACTGTGGTTTAAAGAGATCCCTTTCCAGCCTTCA  150

seq1  TGTCAAATTGAATCTTAAGTGCAACAATTTGGGCAAGGAATTAAATAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATTGAATCTTAAGTGCAACAATTTGGGCAAGGAATTAAATAATG  200

seq1  GGCACAGAGATTTTATAGACTAAGGATTAACATAAAATGACTTGAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGAGATTTTATAGACTAAGGATTAACATAAAATGACTTGAGAGAA  250

seq1  GGGGCTCACTCCTTTTCTCCCCTCTATTCTTCCTGTCCTGTGAAGACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCACTCCTTTTCTCCCCTCTATTCTTCCTGTCCTGTGAAGACACA  300

seq1  GCATCCCCATACTGGAAACAGAATAGCCTTTCCCATCTAGTTGAATATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCCATACTGGAAACAGAATAGCCTTTCCCATCTAGTTGAATATGC  350

seq1  TGGGTACAATTTTTGAGTTTTTCTGAGGTTAGAACTATAAGAAACACGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACAATTTTTGAGTTTTTCTGAGGTTAGAACTATAAGAAACACGTT  400

seq1  TCTGTTCTTTATAACTTACATAAGCCAAGATGCTTTGTTAGAGCAGCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTTTATAACTTACATAAGCCAAGATGCTTTGTTAGAGCAGCATC  450

seq1  CACAGGCTGTATTTGGATGATCCCATTTGCCTATTAGTTGTGGCAGTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTGTATTTGGATGATCCCATTTGCCTATTAGTTGTGGCAGTGTC  500

seq1  CAGTGCTTTCGGGCTAAAGCTGTTCGGCTGAGACAAACTCTGATTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTTTCGGGCTAAAGCTGTTCGGCTGAGACAAACTCTGATTTTCTT  550

seq1  TTCCACATTACTGAATTAGTGCATTGATGAATACAGTAAACCTTTATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACATTACTGAATTAGTGCATTGATGAATACAGTAAACCTTTATTGA  600

seq1  TAAGTCTAGAGTATGTTGTAATGTAGAAATGTACCTAAAATATCTAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTAGAGTATGTTGTAATGTAGAAATGTACCTAAAATATCTAGTTT  650

seq1  TTATTTTGGAAAATATTTAGTTGCAAATAAATATGTCAAGAAGTAGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGGAAAATATTTAGTTGCAAATAAATATGTCAAGAAGTAGAGCA  700

seq1  TATTATTATGTTTATTGACATCTCTTAAATGACAATGTGTGGAACCACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATGTTTATTGACATCTCTTAAATGACAATGTGTGGAACCACAA  750

seq1  CTTTCTCCACATAAAACTCCAATGAAATTTTTACGTTTGGTTTTCCAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCACATAAAACTCCAATGAAATTTTTACGTTTGGTTTTCCAAAC  800

seq1  AAAATTAAGTCTTCTACCATAATAATTTTATAAGGTAAAACAAGGTGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAGTCTTCTACCATAATAATTTTATAAGGTAAAACAAGGTGTGA  850

seq1  TTGAAGAAAACAATAAGTAGCTAACAAAAGATAGCAATC-TTTTGATATT  899
      |||||| |||||||||||||||||||||||||||||||| |||||||| |
seq2  TTGAAG-AAACAATAAGTAGCTAACAAAAGATAGCAATCTTTTTGATA-T  898

seq1  TCTCTAAAATCATACTTGGTGATTATTCTATGCCTTGACACTTGGAAATG  949
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCT-AAATCATACTTGGTGATTATTCTATGCCTTGACACTTGGAAATG  947

seq1  CAATCAGCTTTAATTGCA-TAAAAACAC-TATCTTGTATTTTAAA-GATG  996
      ||||||||||| | |||| ||||||||| | |||||||||||||| ||||
seq2  CAATCAGCTTTTAATGCATTAAAAACACTTTTCTTGTATTTTAAAGGATG  997

seq1  AATACAC-TCTTACTGAAACTTAACAACT--ATTTTTTTCATGAACATGA  1043
      |||| || |||||||||||||||||||||   ||||||||||||||||||
seq2  AATATACTTCTTACTGAAACTTAACAACTTATTTTTTTTCATGAACATGA  1047

seq1  AAATGTAAAATGATTTTACCTGGAAAACTTTCCTAAAATAAAAGTGGATT  1093
      ||||||||||||||||||||||| |||||||||| ||||||| ||| |||
seq2  AAATGTAAAATGATTTTACCTGG-AAACTTTCCTGAAATAAATGTGAATT  1096

seq1  ACACAAGAGGGCTGT-AAAACTCAGGATTAGAGTGC-TGACCTCCTAT-G  1140
      |||||||||||||||  || ||||| ||||  |||| ||| || |||| |
seq2  ACACAAGAGGGCTGTGTAACCTCAGAATTAAGGTGCTTGAACTTCTATGG  1146

seq1  CAGGAGGCCTTGATTTCACTTCTG  1164
      |||||||||||||||||| |||||
seq2  CAGGAGGCCTTGATTTCA-TTCTG  1169

seq1: chr6_74124156_74125016
seq2: B6Ng01-017L12.g_69_930 (reverse)

seq1  GCAAGATTGTTT-CCACAAATCTGTCAAAGTTTTCCTTCAGATTTGCTAA  49
      |||||||||||| ||||||||||||||||||||||||||||| ||||| |
seq2  GCAAGATTGTTTCCCACAAATCTGTCAAAGTTTTCCTTCAGA-TTGCTTA  49

seq1  CTTACATGC-AACTTTCAGCTTTTAGAGTTTACTGCAGAAGAAAAGTACC  98
      |||||| || |||||||||| ||||||||||| |||||||||||||||||
seq2  CTTACAAGCAAACTTTCAGC-TTTAGAGTTTA-TGCAGAAGAAAAGTACC  97

seq1  TTCGTTTTGGTCAGGTTCCAGG-AAAATCTGAGCTGGTGGTTTTCACTTT  147
      || ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTGTTTTGGTCAGGTTCCAGGAAAAATCTGAGCTGGTGGTTTTCACTTT  147

seq1  CAGATAAGTCAATTTCATGCAATCGAATTGCATAGCTATCATTGCCTCC-  196
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  CAGATAAGTCAATTTCATGCAATCG-ATTGCATAGCTATCATTGCCTCCA  196

seq1  AAAATATATTAAAACC-AAAACCCACTACAAAAACAGACCAAACAAAATG  245
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAATATATTAAAACCAAAAACCCACTACAAAAACAGACCAAACAAAATG  246

seq1  AACTCAGCATGTGAAATTTCTGTCTACATTGAATAAAGTGTTGTGTAATA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGCATGTGAAATTTCTGTCTACATTGAATAAAGTGTTGTGTAATA  296

seq1  TTTTCTTAAGATGGACTGTAAATGTGGATAAAGTGCCTCCATTTAAATTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAAGATGGACTGTAAATGTGGATAAAGTGCCTCCATTTAAATTT  346

seq1  TTTGTTTTATCTGGTATTAGTTCACATCCATCTTTCCACTTAAATATTAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTATCTGGTATTAGTTCACATCCATCTTTCCACTTAAATATTAT  396

seq1  TTCTAATCAACTGTGACAATTAACAAAAAGTGGAGGAAAATGTCTCAGAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATCAACTGTGACAATTAACAAAAAGTGGAGGAAAATGTCTCAGAT  446

seq1  TCTAGCTATGTCGTTGAAGGGAGTTTATAGATAGGAAGTTGAACATCAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTATGTCGTTGAAGGGAGTTTATAGATAGGAAGTTGAACATCAAA  496

seq1  ATCATGTCCTTGGGAGACTATATATGCTTATTTTTCTGTAAGAGCTGCAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTCCTTGGGAGACTATATATGCTTATTTTTCTGTAAGAGCTGCAG  546

seq1  AAAATGTTGATTTTATAGAGACAATATGAAATAGCAGCTAAGAATATTAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTGATTTTATAGAGACAATATGAAATAGCAGCTAAGAATATTAG  596

seq1  AACAGACTAAATAGAGCAAATGCTGAAGGGAAGAGGCTTAGAATTAAATA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTAAATAGAGCAAATGCTGAAGGGAAGAGGCTTAGAATTAAATA  646

seq1  TGGACAGCAATACCTAATGTCATGTATCACAGTAGCATGACTATGGGTGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGCAATACCTAATGTCATGTATCACAGTAGCATGACTATGGGTGA  696

seq1  CAACTCACTTTGTGTCTTAAAACAGATAATAGGAAACAGTTTGAATGTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACTTTGTGTCTTAAAACAGATAATAGGAAACAGTTTGAATGTTC  746

seq1  CTATGGTGTATAGAATTAGAAATGTCTCTTGTGGGCTCAGGTATTTGAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTGTATAGAATTAGAAATGTCTCTTGTGGGCTCAGGTATTTGAAA  796

seq1  ACTTGTTCTCTAGTTGGTGGCTCTGTTTGGGATGTAATTGGGAAGTGCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTCTCTAGTTGGTGGCTCTGTTTGGGATGTAATTGGGAAGTGCAG  846

seq1  CATCCCTGAAGAATTC  861
      ||||||||||||||||
seq2  CATCCCTGAAGAATTC  862