BAC Information

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BAC

Clone NameB6Ng01-017M01
Chromosome6 (Build37)
Map Location 59,973,201 - 59,974,031
singlet/doubletsinglet
Overlap genenone
Upstream geneD430015B01Rik, Tigd2, Gprin3, EG634166, EG627108
Downstream geneEG434019, LOC671300, EG627178, LOC100041706, LOC100041717, A530053G22Rik, LOC667066, LOC100041726, Snca, ENSMUSG00000064018, Mmrn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017M01.bB6Ng01-017M01.g
ACCDH851344DH851345
length1,108922
definitionDH851344|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M01, 5' end.DH851345|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaactacaaagttgagcctcaaaataataatgtagaaattttag
gaatataaagcatcaaagaaaattaaagtagattctttggaaacttaaac
aagtttggtaaactttaatgaaagatctctctatccctctgttcttctga
tctctctttctatttctctcctatagatagattgaatgatagatagatag
atagacctagagatagagatacataaaaacatagtaatatagataataga
aatacattaaatcaaattaattccatataaaataaataattgaaacagac
tcacaattcctactgaaattgaagtaaatattacaactgaatggatgcca
gaaccagattaattcagtgcagaattctgtcaagtattctaagaagacta
ataccaatgctcctcaaactatcctgcaaaatagaaactgaaggaacatt
cccaaatttttcttatgaaaccactattgctctaaaactaaatcatacaa
aggctaaaaaagaaaattatatacccatattctgtgataacttagatgca
aaaaattttcaatagaaaacttaaaatccaaatccagtaatatgtcaaaa
ggttatccaatataatcaaatgtctttttttccagaaattcagggatttc
tcaaccaatgggaatcagtaaatacaatctaccatatgaacagtttacac
gacagaaactatattattatctcagtagatacagaagtgactgataaaat
ccagcatctctttcataataaaggatcttgagactataaatatgaactat
atgtttcaacataatgaagataattcgcaataagtaaatagccaacatta
tcctaaatccaaagtatctgaaagcattttctattaaaaataagaaagag
acacactctctccatatcagttcaatatagtactttaagtcttatctaaa
gtattaggatactgaaagacatcaaggggattataaataggaaaggaata
aataaaagtattttattatagttagatagcgttttaattaaaatccttaa
tatttaccagaaagattcttgccgttggatttagcaatttaatgaaataa
agtaatac
gaattcagaaagagcctgacatccacctctagcctactgatatgtacaaa
ttaatgttaaataaatatgcaatcatgtaacacactcacatatatcaaaa
tacaggcttcctgcatcaaactcataattctagtttagtaggtataccga
attatgtaagtaaatatggtgtatcctgctaccaatattgaataaaggaa
taaacacctttgagcagctgtacagagtgtcttgttgggtatttttggca
ggctgtaagtcaaacagaagattttatctgtaattaatctgagttataga
gttcattaaatcccatatgccaatttgttatatagcaaatgaaaagaaat
tctaggtgttacaccagtcagaatgggtaagatcaaaaattcaggtgaca
gcagatgctggcaaggatgtggagaaagaggaacactcctccattgttgg
tgggattgcaaacttgtacaaccacacaggaaatcagtctggcggttcct
cagaaaattggacatagtactacaggaggatcctgcaatacctctcatgg
gcatatatccagaagatgttcgaaccggtaagaaggacacatgctcaact
atgttcatacgaaccttatttataatatccagaagctggaaagaacccag
atgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaa
tggagtgttacgcagctattaagaacaatgaatttactaaattcctaggc
aaattgatggacctggagggcatcttcttgagtgaggtaacccaatcaaa
aaggaactcacacaatatgtactcaatgatactttactttatatacaatg
tagttaatataatgcatatacatatattaaagaaagataatctcaaagaa
attttaaatgaaagagaaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_59973201_59974031
seq2: B6Ng01-017M01.g_63_893

seq1  GAATTCAGAAAGAGCCTGACATCCACCTCTAGCCTACTGATATGTACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAGAGCCTGACATCCACCTCTAGCCTACTGATATGTACAAA  50

seq1  TTAATGTTAAATAAATATGCAATCATGTAACACACTCACATATATCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTAAATAAATATGCAATCATGTAACACACTCACATATATCAAAA  100

seq1  TACAGGCTTCCTGCATCAAACTCATAATTCTAGTTTAGTAGGTATACCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCTTCCTGCATCAAACTCATAATTCTAGTTTAGTAGGTATACCGA  150

seq1  ATTATGTAAGTAAATATGGTGTATCCTGCTACCAATATTGAATAAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTAAGTAAATATGGTGTATCCTGCTACCAATATTGAATAAAGGAA  200

seq1  TAAACACCTTTGAGCAGCTGTACAGAGTGTCTTGTTGGGTATTTTTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACCTTTGAGCAGCTGTACAGAGTGTCTTGTTGGGTATTTTTGGCA  250

seq1  GGCTGTAAGTCAAACAGAAGATTTTATCTGTAATTAATCTGAGTTATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTAAGTCAAACAGAAGATTTTATCTGTAATTAATCTGAGTTATAGA  300

seq1  GTTCATTAAATCCCATATGCCAATTTGTTATATAGCAAATGAAAAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTAAATCCCATATGCCAATTTGTTATATAGCAAATGAAAAGAAAT  350

seq1  TCTAGGTGTTACACCAGTCAGAATGGGTAAGATCAAAAATTCAGGTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTGTTACACCAGTCAGAATGGGTAAGATCAAAAATTCAGGTGACA  400

seq1  GCAGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGG  450

seq1  TGGGATTGCAAACTTGTACAACCACACAGGAAATCAGTCTGGCGGTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTGCAAACTTGTACAACCACACAGGAAATCAGTCTGGCGGTTCCT  500

seq1  CAGAAAATTGGACATAGTACTACAGGAGGATCCTGCAATACCTCTCATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTGGACATAGTACTACAGGAGGATCCTGCAATACCTCTCATGG  550

seq1  GCATATATCCAGAAGATGTTCGAACCGGTAAGAAGGACACATGCTCAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATATCCAGAAGATGTTCGAACCGGTAAGAAGGACACATGCTCAACT  600

seq1  ATGTTCATACGAACCTTATTTATAATATCCAGAAGCTGGAAAGAACCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATACGAACCTTATTTATAATATCCAGAAGCTGGAAAGAACCCAG  650

seq1  ATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA  700

seq1  TGGAGTGTTACGCAGCTATTAAGAACAATGAATTTACTAAATTCCTAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGTTACGCAGCTATTAAGAACAATGAATTTACTAAATTCCTAGGC  750

seq1  AAATTGATGGACCTGGAGGGCATCTTCTTGAGTGAGGTAACCCAATCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATGGACCTGGAGGGCATCTTCTTGAGTGAGGTAACCCAATCAAA  800

seq1  AAGGAACTCACACAATATGTACTCAATGATA  831
      |||||||||||||||||||||||||||||||
seq2  AAGGAACTCACACAATATGTACTCAATGATA  831