BAC Information

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BAC

Clone NameB6Ng01-017M13
Chromosome6 (Build37)
Map Location 109,744,087 - 109,745,243
singlet/doubletsinglet
Overlap genenone
Upstream geneArl8b, Edem1, EG627371, LOC639110, LOC100043720
Downstream geneGrm7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017M13.bB6Ng01-017M13.g
ACCDH851367DH851368
length4261,147
definitionDH851367|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M13, 5' end.DH851368|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aggatcaggacaggagagatgtctagatagccagaaaatgaatggaaatc
ggcaactaacaacagcatggaggtggagaacatctccagaaggaagcaga
gatatggaataagggaggtgcccaagaatcaatgggggtgaccttagcta
tgtctcactacattgcaaatgtggaacctgaagaggccatctcttgtagc
cagataggaaccccagtggagtgatggagacaccaacctacccacaaaat
gttcaacccaaaatttatcctgtctatgaataatacaggcacaggggaga
gagcagagactgaggaaatggccaaccaatgacaagcccaacttgggatc
catcttgtggacaaacaccaatcccaggagggtccccactggctcatagg
agaagggggatggggaatgtggggga

gaattcaatcctataattttgaaggcaggaaacagaaatatgagagtaat
tttcttaatggttgtttttcaaaatacaattaatttaaaacactgaactt
tattaaagaaaaatcaaatagttattgctgagtgttatataaataactaa
gtaaacagctgctcaaatagaatttgggtttggtcatatgagacaagtta
attacacaagtaactatcaatgcgacttagtcccctaagtattacaagct
ataaaacatgttacttaaatatactgcaaactctgaagcttgaaaatatt
tattaatattttacattataactgtaacctgaagtcaacaaaacaattac
tgctttgggactatggtcttaaaatgcttcatgtttagggtgactgctgt
cagagtgagtactaagatataacatcttgacacataggaaaacttcctta
ggaacatcacctacaataccacgaacctcccttcattatgttttaatttc
ctctaacaagctgagtgcttcttgtgtcacatgtaactgtcaagtcagaa
atccatttttcttcaattttattttatactattgcttaattctggattca
gatagtctaggaacaaagccttctggtggaaattgtaatattttcccctc
aaccctgttagtagcattggagtaattatgctttcaactttatgaagtcc
tacgtttagctcataacagcaaagctggcaaaacttatcctcttcacaag
tgaggccagtggcagagtatatgaaaagttacagaatctcagctcactcc
ttctcatggcagctatggctcacatgtctcttagttatataaaagtcaat
tttctccctgggcagcaatatggcatcaattacaagggtccagacctaga
tgcccacaaggctgggatccttccagaaaaaaatactatatatccttaac
aggttcaaagcatcttgaccccatgttctatctttactaggtggggaatt
taaatttacaaatgggaatgtattctctaaggagatttaataatagtact
atcaatatcccttgtgaatttacatggcatgtcttggggaacaaattaga
tataattctgagctcacaatttctgctcacaccttggggttattaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109744087_109745243
seq2: B6Ng01-017M13.g_67_1213 (reverse)

seq1  TGTAATACCACCACAGGTGT-AGCAGAAAATAGTGAGCTACAGAATTATA  49
      ||||||| | ||| |||||| ||||| |||| ||||||| ||||||||||
seq2  TGTAATAACCCCA-AGGTGTGAGCAG-AAATTGTGAGCT-CAGAATTATA  47

seq1  TCTAATTATGTATCACAAAAGACATGCCATGTAAAATTCACAAGGGATTA  99
      ||||||| |||  | |  |||||||||||||| |||||||||||||| ||
seq2  TCTAATT-TGTTCCCC--AAGACATGCCATGT-AAATTCACAAGGGA-TA  92

seq1  TTGATAGTACTATTATTTAAATACTCCTTAGAGAATACATTACCATTTTG  149
      ||||||||||||||| |||||| |||||||||||||||||| ||| ||||
seq2  TTGATAGTACTATTA-TTAAAT-CTCCTTAGAGAATACATTCCCA-TTTG  139

seq1  TAAATTTAAATT-CCCACTTAGTAAAGATAG-ACATGGGGTCCAGATGCT  197
      |||||||||||| ||||| |||||||||||| |||||||||| |||||| 
seq2  TAAATTTAAATTCCCCACCTAGTAAAGATAGAACATGGGGTCAAGATGC-  188

seq1  TTTGAACCTGTTTAAGGATATATAAGTTATTTTTTCTGGAAGGATCCCAG  247
      |||||||||| |||||||||||| |||  |||||||||||||||||||||
seq2  TTTGAACCTG-TTAAGGATATAT-AGTATTTTTTTCTGGAAGGATCCCAG  236

seq1  CCTTGTGGGCATCTAGGTCTGGACCCTTGT-ATTGATGCCATATTGCTGC  296
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTTGTGGGCATCTAGGTCTGGACCCTTGTAATTGATGCCATATTGCTGC  286

seq1  CCAGGGAGAAAATTGACTTTTATATAACTAAGAGACATGTGAGCCATAGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGAAAATTGACTTTTATATAACTAAGAGACATGTGAGCCATAGC  336

seq1  TGCCATGGGAAGGAGTGAGCTGAGATTCTGTAACTTTTCATATACTCTGC  396
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGAGAAGGAGTGAGCTGAGATTCTGTAACTTTTCATATACTCTGC  386

seq1  CACTGGCCTCACTTGTGAAGAGGATAAGTTTTGCCAGCTTTGCTGTTATG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCCTCACTTGTGAAGAGGATAAGTTTTGCCAGCTTTGCTGTTATG  436

seq1  AGCTAAACGTAGGACTTCATAAAGTTGAAAGCATAATTACTCCAATGCTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAACGTAGGACTTCATAAAGTTGAAAGCATAATTACTCCAATGCTA  486

seq1  CTAACAGGGTTGAGGGGAAAATATTACAATTTCCACCAGAAGGCTTTGTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGGGTTGAGGGGAAAATATTACAATTTCCACCAGAAGGCTTTGTT  536

seq1  CCTAGACTATCTGAATCCAGAATTAAGCAATAGTATAAAATAAAATTGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACTATCTGAATCCAGAATTAAGCAATAGTATAAAATAAAATTGAA  586

seq1  GAAAAATGGATTTCTGACTTGACAGTTACATGTGACACAAGAAGCACTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGGATTTCTGACTTGACAGTTACATGTGACACAAGAAGCACTCA  636

seq1  GCTTGTTAGAGGAAATTAAAACATAATGAAGGGAGGTTCGTGGTATTGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTAGAGGAAATTAAAACATAATGAAGGGAGGTTCGTGGTATTGTA  686

seq1  GGTGATGTTCCTAAGGAAGTTTTCCTATGTGTCAAGATGTTATATCTTAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGTTCCTAAGGAAGTTTTCCTATGTGTCAAGATGTTATATCTTAG  736

seq1  TACTCACTCTGACAGCAGTCACCCTAAACATGAAGCATTTTAAGACCATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACTCTGACAGCAGTCACCCTAAACATGAAGCATTTTAAGACCATA  786

seq1  GTCCCAAAGCAGTAATTGTTTTGTTGACTTCAGGTTACAGTTATAATGTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAAGCAGTAATTGTTTTGTTGACTTCAGGTTACAGTTATAATGTA  836

seq1  AAATATTAATAAATATTTTCAAGCTTCAGAGTTTGCAGTATATTTAAGTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAATAAATATTTTCAAGCTTCAGAGTTTGCAGTATATTTAAGTA  886

seq1  ACATGTTTTATAGCTTGTAATACTTAGGGGACTAAGTCGCATTGATAGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTTATAGCTTGTAATACTTAGGGGACTAAGTCGCATTGATAGTT  936

seq1  ACTTGTGTAATTAACTTGTCTCATATGACCAAACCCAAATTCTATTTGAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGTAATTAACTTGTCTCATATGACCAAACCCAAATTCTATTTGAG  986

seq1  CAGCTGTTTACTTAGTTATTTATATAACACTCAGCAATAACTATTTGATT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTTACTTAGTTATTTATATAACACTCAGCAATAACTATTTGATT  1036

seq1  TTTCTTTAATAAAGTTCAGTGTTTTAAATTAATTGTATTTTGAAAAACAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAATAAAGTTCAGTGTTTTAAATTAATTGTATTTTGAAAAACAA  1086

seq1  CCATTAAGAAAATTACTCTCATATTTCTGTTTCCTGCCTTCAAAATTATA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAGAAAATTACTCTCATATTTCTGTTTCCTGCCTTCAAAATTATA  1136

seq1  GGATTGAATTC  1157
      |||||||||||
seq2  GGATTGAATTC  1147


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