BAC Information

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BAC

Clone NameB6Ng01-018L08
Chromosome6 (Build37)
Map Location 21,982,482 - 22,118,948
singlet/doubletdoublet
Overlap geneA430107O13Rik
Upstream geneKcnd2, LOC100041343, Tspan12, LOC100041358, Ing3
Downstream geneLOC667307, Wnt16, D6Wsu176e, LOC100040948, LOC100040959, LOC668018, LOC668022, Ptprz1, Aass, EG668044, EG546894, EG668053, EG384356
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018L08.bB6Ng01-018L08.g
ACCDH852033DH852034
length1,222681
definitionDH852033|Mus musculus domesticus DNA, BAC clone: B6Ng01-018L08, 5' end.DH852034|Mus musculus domesticus DNA, BAC clone: B6Ng01-018L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,982,482 - 21,983,748)(22,118,269 - 22,118,948)
sequence
gaattcctattttacttctccttacatacagtgttggtttcctaggcatt
taaagtcttagctgttaccacatttttaaaagtctgatgagcttaaaagt
gacacatattttcatttttttgtgaagattatttgcacatcaattaaaca
atgctatatactcagggccattttttacacaaaatttttattttcaggac
ttttataattaatatttggtatttggatatccatataaaagcaatcctga
atgccaagcagaaaagaatagactctgaaatccacaaaatgccaggaaaa
atatttaaaatatggccattttatattcatggcacagtcaaaatccaaaa
ttggctctatcacctaaagttcctggggattccgagaaaaacagttttca
tgcattgcttatggaaagtttttctaaaaagtaatctgaccaatcaataa
aatttaaaatacttatacttttgaagcaaacaaacatattctagggaaac
caatatgatagacgttaaacaattaaacagttgtaaaatttatgcctgac
tattaaaattaagtgttaatagaatagaagagtaattttaaatagagaca
actcataaaaatagattgctacagaaaattttcacaattaatgcttagag
gggaaaagagtatattaggatctaagcatctctctagaggtagaaagcta
atgagaccacgtgatactatgaaccagcaaaattcctgctaaaatatgct
ggataaagtatgctccttcaatgcgtaggaacagtccacttgaacagtac
ttggcatagttttatgttgggctgaatattcttcatctcaaagatgacag
aattattagcctcaggagacacttctgatatactcttggcttctgggagc
attgccagtttcagaagaaaaaatgtgaagtgtgtgagacttgtcttagt
gatagccttgcccacccattcccactgtttacatatcagtctgggcacac
agtcttgggagatgccaggtttgactatcacgtgggatcactgttagtga
cctttgaaatgtactccgacatcattttaagctcctgcagtacctgtgat
gcaaattcattggttatcctcagagacaggttactggcctagcttagaca
ttacgtgagtctggctgtaatatggtacccactatgcctagacctctttc
tcaccagaaaaaggtcttgaag
gaattcacttgggaatctttttgacccagcagtgtctctctgctgccata
ttatcaccccaagttaatggttctttccataacccagagaagctcaagtc
agtactagcataattgctgcgagcttcacagatggtcagaggctttatgt
acaagaatataattttctttttttttttttttgaaaaaaaaattagcttc
tgattaaatttctagttttcctggatgaaacttttagatgtgtttggatg
catttgtcctgagtgaggggggctaggatgcttgttggggttgccttggg
taccatcttttcttcgctccacccagctgcttctgtgctcacccaccacg
tgctggctccagctgcccctcccctgcctcctcagaggctgtggaagtaa
gggagagaggtctcctctgctactgatttccatacagctgtgtgattgtg
gtgatagaatcatctagataaaggacatctctgtgtgaccctctgctttt
cctcttggttatgaattccaggaatcatctgtcttggggacagatacagc
acactggctctcagggaaattttcaagtagggcagaatccagctttttca
ctctactttctctttcctctctctgtctcctccgtctcagttcccccgtc
cccccctctcctctcctctcctctccactcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_21982482_21983748
seq2: B6Ng01-018L08.b_46_1267

seq1  GAATTCCTATTTTACTTCTCCTTACATACAGTGTTGGTTTCCTAGGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTTTACTTCTCCTTACATACAGTGTTGGTTTCCTAGGCATT  50

seq1  TAAAGTCTTAGCTGTTACCACATTTTTAAAAGTCTGATGAGCTTAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCTTAGCTGTTACCACATTTTTAAAAGTCTGATGAGCTTAAAAGT  100

seq1  GACACATATTTTCATTTTTTTGTGAAGATTATTTGCACATCAATTAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATATTTTCATTTTTTTGTGAAGATTATTTGCACATCAATTAAACA  150

seq1  ATGCTATATACTCAGGGCCATTTTTTACACAAAATTTTTATTTTCAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATATACTCAGGGCCATTTTTTACACAAAATTTTTATTTTCAGGAC  200

seq1  TTTTATAATTAATATTTGGTATTTGGATATCCATATAAAAGCAATCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATTAATATTTGGTATTTGGATATCCATATAAAAGCAATCCTGA  250

seq1  ATGCCAAGCAGAAAAGAATAGACTCTGAAATCCACAAAATGCCAGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAGCAGAAAAGAATAGACTCTGAAATCCACAAAATGCCAGGAAAA  300

seq1  ATATTTAAAATATGGCCATTTTATATTCATGGCACAGTCAAAATCCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAAATATGGCCATTTTATATTCATGGCACAGTCAAAATCCAAAA  350

seq1  TTGGCTCTATCACCTAAAGTTCCTGGGGATTCCGAGAAAAACAGTTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCTATCACCTAAAGTTCCTGGGGATTCCGAGAAAAACAGTTTTCA  400

seq1  TGCATTGCTTATGGAAAGTTTTTCTAAAAAGTAATCTGACCAATCAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGCTTATGGAAAGTTTTTCTAAAAAGTAATCTGACCAATCAATAA  450

seq1  AATTTAAAATACTTATACTTTTGAAGCAAACAAACATATTCTAGGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAATACTTATACTTTTGAAGCAAACAAACATATTCTAGGGAAAC  500

seq1  CAATATGATAGACGTTAAACAATTAAACAGTTGTAAAATTTATGCCTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGATAGACGTTAAACAATTAAACAGTTGTAAAATTTATGCCTGAC  550

seq1  TATTAAAATTAAGTGTTAATAGAATAGAAGAGTAATTTTAAATAGAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATTAAGTGTTAATAGAATAGAAGAGTAATTTTAAATAGAGACA  600

seq1  ACTCATAAAAATAGATTGCTACAGAAAATTTTCACAATTAATGCTTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAAAAATAGATTGCTACAGAAAATTTTCACAATTAATGCTTAGAG  650

seq1  GGGAAAAGAGTATATTAGGATCTAAGCATCTCTCTAGAGGTAGAAAGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGAGTATATTAGGATCTAAGCATCTCTCTAGAGGTAGAAAGCTA  700

seq1  ATGAGACCACGTGATACTATGAACCAGCAAAATTCCTGCTAAAATATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACCACGTGATACTATGAACCAGCAAAATTCCTGCTAAAATATGCT  750

seq1  GGATAAAGTATGCTCCTTCAATGCGTAGGAACAGTCCACTTGAACAGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAGTATGCTCCTTCAATGCGTAGGAACAGTCCACTTGAACAGTAC  800

seq1  TTGGCATAGTTTTATGTTGGGCTGAATATTCTTCATCTCAAAGATGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATAGTTTTATGTTGGGCTGAATATTCTTCATCTCAAAGATGACAG  850

seq1  AATTATTAGCCTCAGGAGACACTTCTGATATACTCTTGGCTTCTGGGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTAGCCTCAGGAGACACTTCTGATATACTCTTGGCTTCTGGGAGC  900

seq1  ATTGCCAGTTTCAGAAGAAAAAAATGTGAAGTGTGTGAGACTTGTCTTAG  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  ATTGCCAGTTTCAGAAG-AAAAAATGTGAAGTGTGTGAGACTTGTCTTA-  948

seq1  GTGATAGCCTTGCCCACCCATTCCCCACTTGTTTAACATATCCAGTTCTG  1000
      |||||||||||||||||||||| ||||| ||||| |||||| ||| ||||
seq2  GTGATAGCCTTGCCCACCCATT-CCCAC-TGTTT-ACATAT-CAG-TCTG  993

seq1  GGCACCAACAGTCTTGGGAGAATGCCCAGGTTGGACCTATCACGTGGGAT  1050
      |||||  ||||||||||||| ||| ||||||| || ||||||||||||||
seq2  GGCAC--ACAGTCTTGGGAG-ATG-CCAGGTTTGA-CTATCACGTGGGAT  1038

seq1  CCACTGTTAGTGACTCTTGGAAATGTACCTCCCGACATCATGTTTCAGCT  1100
       ||||||||||||| ||| |||||||||   |||||||||| ||| ||||
seq2  -CACTGTTAGTGAC-CTTTGAAATGTAC--TCCGACATCAT-TTTAAGCT  1083

seq1  CCTGCAATGTCACCTGTGTATGCAAATTCATT-GTCATCCTCCAGAGACA  1149
      |||||| |   ||||||| ||||||||||||| || ||||| ||||||| 
seq2  CCTGCAGT---ACCTGTG-ATGCAAATTCATTGGTTATCCT-CAGAGAC-  1127

seq1  AGGTTACTGCCCCTAGCTTAAGGACACATTTTAGCTGAGGTCCCTGGTCG  1199
      |||||||||  |||||||||  ||||    |||  ||||    ||||  |
seq2  AGGTTACTG-GCCTAGCTTA--GACA----TTACGTGAG---TCTGGCTG  1167

seq1  TTATTAAATTGAAAACCCCCACTAAATGGCCCTTGAGCTTCTTTCTACTA  1249
      | ||   || | |    ||||||  |||  ||| || | |||||||   |
seq2  TAAT---ATGGTA----CCCACT--ATG--CCTAGA-CCTCTTTCT--CA  1203

seq1  CGAGAAAAAGGTC-TGAAG  1267
      | ||||||||||| |||||
seq2  CCAGAAAAAGGTCTTGAAG  1222

seq1: chr6_22118269_22118948
seq2: B6Ng01-018L08.g_65_745 (reverse)

seq1  GGAGAGGAGAGGAGAGGAGAGGAGA-GGGGGGACGGGGGAACTGAGACGG  49
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAGTGGAGAGGAGAGGAGAGGAGAGGGGGGGACGGGGGAACTGAGACGG  50

seq1  AGGAGACAGAGAGAGGAAAGAGAAAGTAGAGTGAAAAAGCTGGATTCTGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACAGAGAGAGGAAAGAGAAAGTAGAGTGAAAAAGCTGGATTCTGC  100

seq1  CCTACTTGAAAATTTCCCTGAGAGCCAGTGTGCTGTATCTGTCCCCAAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTGAAAATTTCCCTGAGAGCCAGTGTGCTGTATCTGTCCCCAAGA  150

seq1  CAGATGATTCCTGGAATTCATAACCAAGAGGAAAAGCAGAGGGTCACACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGATTCCTGGAATTCATAACCAAGAGGAAAAGCAGAGGGTCACACA  200

seq1  GAGATGTCCTTTATCTAGATGATTCTATCACCACAATCACACAGCTGTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTCCTTTATCTAGATGATTCTATCACCACAATCACACAGCTGTAT  250

seq1  GGAAATCAGTAGCAGAGGAGACCTCTCTCCCTTACTTCCACAGCCTCTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCAGTAGCAGAGGAGACCTCTCTCCCTTACTTCCACAGCCTCTGA  300

seq1  GGAGGCAGGGGAGGGGCAGCTGGAGCCAGCACGTGGTGGGTGAGCACAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGGGGAGGGGCAGCTGGAGCCAGCACGTGGTGGGTGAGCACAGA  350

seq1  AGCAGCTGGGTGGAGCGAAGAAAAGATGGTACCCAAGGCAACCCCAACAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTGGGTGGAGCGAAGAAAAGATGGTACCCAAGGCAACCCCAACAA  400

seq1  GCATCCTAGCCCCCCTCACTCAGGACAAATGCATCCAAACACATCTAAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTAGCCCCCCTCACTCAGGACAAATGCATCCAAACACATCTAAAA  450

seq1  GTTTCATCCAGGAAAACTAGAAATTTAATCAGAAGCTAATTTTTTTTTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATCCAGGAAAACTAGAAATTTAATCAGAAGCTAATTTTTTTTTCA  500

seq1  AAAAAAAAAAAAAAGAAAATTATATTCTTGTACATAAAGCCTCTGACCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAGAAAATTATATTCTTGTACATAAAGCCTCTGACCAT  550

seq1  CTGTGAAGCTCGCAGCAATTATGCTAGTACTGACTTGAGCTTCTCTGGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAGCTCGCAGCAATTATGCTAGTACTGACTTGAGCTTCTCTGGGT  600

seq1  TATGGAAAGAACCATTAACTTGGGGTGATAATATGGCAGCAGAGAGACAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAGAACCATTAACTTGGGGTGATAATATGGCAGCAGAGAGACAC  650

seq1  TGCTGGGTCAAAAAGATTCCCAAGTGAATTC  680
      |||||||||||||||||||||||||||||||
seq2  TGCTGGGTCAAAAAGATTCCCAAGTGAATTC  681