BAC Information

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BAC

Clone NameB6Ng01-019A23
Chromosome6 (Build37)
Map Location 75,550,909 - 75,551,944
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019A23.bB6Ng01-019A23.g
ACCDH852263DH852264
length1,2131,022
definitionDH852263|Mus musculus domesticus DNA, BAC clone: B6Ng01-019A23, 5' end.DH852264|Mus musculus domesticus DNA, BAC clone: B6Ng01-019A23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaatgcaccaccaagttctacaaccttaccatctatgacatcga
tatgattgttaccaacaaccttctccctgaggaacacagggagtctgcga
aaagcctagagctcacacagatgagatgcaccaaactaacattgcacaac
tgaaggatcccaaatgggtctatgataccccagggaatatcctagataaa
gactaacagcctgccttctgactggtctctgtaaagctgctctttaagca
gtaaactatggaaaacccaagagcaaatataaaaacctatctcaattctt
agactaccttagaaaaggccctcttacaatatagaattctgaatcccaag
accccaggtaaaaaataagtttccattaaacctcttctttttcctaaaat
ttcccagccttatagccatatttaacattaagaaaaacaaacagacagac
aaacaaaaccccaactctgaaaggtaaaggactaacactgaacttcaggt
tggatcatgggagagatcaaaaaacccccgaacaaaagtaccaaatgctg
gctaaggctttccaggggtggcagccaatccccatgcttccatgcttccc
acagtctgaggaccatatggtctctgtttcaaatgaatttaaaaggatta
ctggaccatgatatgtcctaaccttcacaaacaatactgaccatgtccag
agtgccattaaagggatattgagctgttgactgttcctgtatcccttatg
gcacaagggaattggacccagattaccttctagctcaccacctaagttgg
gccgtggacaaccaaaggccctcttagcctgagtcaccatctctgacatg
gagtcacagcagttgtcacagcatcagggtgactcatatccttacccctg
gacaccaaggccaccaagtcatgatggggttatgggaacccacctttcct
tcttgatcccctctggacaggatagaaagaatagtctttccaaaattgct
aaaactaccattcactgtattctttaaggatattcctctactaagttttt
ctgggtacaacaagtcacatgactttctgaaaacatgttgtaaggtgggg
ccaattcttgttcagctccaacttacctcagctactagctgtgcatctct
aggcaagtcaagcacttcgtacatcagttaacctcggactggatacgcaa
tagccattttatg
gaattcatcatacaattatttttttctgtattgtcattgttcacatacaa
atgaataaaagacctgcatgaaggctgaggcgctggaataattaagtcta
agctatgctgtctgtaatacaaccaaaatgaggcctggacatactgaagt
gagagattattgtcttgctagaagagttgaactgaatcaacaatcggctg
atttctttttgtctgaaataagtctgcttctgaaataacatcgactcact
gataacatgaatatcacataaaaccaaggttcctaataccctgtcttctt
tagggaaatcaacctggccttgcagccttcattgcccatagacttaagct
tgagtaaaataaaaagtccatgaaaatcacctagagttttcttccttttt
ttttttttttaaataattaactactttattttatttttattttatttttt
tttttacatcccaaagttttccccctcctggtagtctccctcccagagtc
cttcacacaatcccctttctccttcacctctgggagggtgctcctccccc
tccccctgcctcagggcatccctcttccctgggacatcaagtgtctacag
gattaggcacatcttttcaactgagacaagacaagacagccctctgctgc
atacatgctggggacctcagagcagcccatgcatgtgtttggttggtggc
ttagtctctgggtgctcctagaggtcctatttagtcaacactgctggtct
tcctatggggttgccatctgctttacctcctttaatccttcccataactc
ttccacaggcgtcctagacctccctcagatgcttggctgtaagtatctac
atctgtctcagtaacattctggtagagactttcagaggtttttattttga
atgtcaggtactcagtccgaaacttggacctatttagtttccttcttcta
caatattctgtactgaaagctttggttattactcatgttaggtccaatag
gagcgaagcattatgggagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75550909_75551944
seq2: B6Ng01-019A23.g_67_1088 (reverse)

seq1  AAACTCCCATTAATTGCTTTCTGCTCCTTATTTTGGACCTAACATGAGTT  50
      ||||||||||  | |||||   |||||   | |||||||||||||||| |
seq2  AAACTCCCAT--AATGCTT--CGCTCC---TATTGGACCTAACATGAG-T  42

seq1  AATAA-CAAAGCTTTTCAGTACCAGAATAATATGTTAGAAGAAGGAAACT  99
      ||||| |||||| |||||||||    | |||||  |||||||||||||||
seq2  AATAACCAAAGC-TTTCAGTAC----AGAATATTGTAGAAGAAGGAAACT  87

seq1  AATATAGGTTCAAGTTTCTGAACTGAGTACCTGACATTCAAAATAAAAAC  149
      || |||||| |||||||| | |||||||||||||||||||||||||||||
seq2  AA-ATAGGTCCAAGTTTC-GGACTGAGTACCTGACATTCAAAATAAAAAC  135

seq1  CTCTGAAAGTCTCTACCAGAATGTTACTGAGACAGATGTAGATACTTACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAAGTCTCTACCAGAATGTTACTGAGACAGATGTAGATACTTACA  185

seq1  GCCAAGCATCTGAGGGAGGTCTAGGACGCCTGTGGAAGAGTTATGGGAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCATCTGAGGGAGGTCTAGGACGCCTGTGGAAGAGTTATGGGAAG  235

seq1  GATTAAAGGAGGTAAAGCAGATGGCAACCCCATAGGAAGACCAGCAGTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGGAGGTAAAGCAGATGGCAACCCCATAGGAAGACCAGCAGTGT  285

seq1  TGACTAAATAGGACCTCTAGGAGCACCCAGAGACTAAGCCACCAACCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAATAGGACCTCTAGGAGCACCCAGAGACTAAGCCACCAACCAAA  335

seq1  CACATGCATGGGCTGCTCTGAGGTCCCCAGCATGTATGCAGCAGAGGGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCATGGGCTGCTCTGAGGTCCCCAGCATGTATGCAGCAGAGGGCT  385

seq1  GTCTTGTCTTGTCTCAGTTGAAAAGATGTGCCTAATCCTGTAGACACTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTCTTGTCTCAGTTGAAAAGATGTGCCTAATCCTGTAGACACTTG  435

seq1  ATGTCCCAGGGAAGAGGGATGCCCTGAGGCAGGGGGAGGGGGAGGAGCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCAGGGAAGAGGGATGCCCTGAGGCAGGGGGAGGGGGAGGAGCAC  485

seq1  CCTCCCAGAGGTGAAGGAGAAAGGGGATTGTGTGAAGGACTCTGGGAGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGAGGTGAAGGAGAAAGGGGATTGTGTGAAGGACTCTGGGAGGG  535

seq1  AGACTACCAGGAGGGGGAAAACTTTGGGATGTAAAAAAAAAAATAAAATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACCAGGAGGGGGAAAACTTTGGGATGTAAAAAAAAAAATAAAATA  585

seq1  AAAATAAAATAAAGTAGTTAATTATTTAAAAAAAAAAAAAAAGGAAGAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATAAAGTAGTTAATTATTTAAAAAAAAAAAAAAAGGAAGAAA  635

seq1  ACTCTAGGTGATTTTCATGGACTTTTTATTTTACTCAAGCTTAAGTCTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGGTGATTTTCATGGACTTTTTATTTTACTCAAGCTTAAGTCTAT  685

seq1  GGGCAATGAAGGCTGCAAGGCCAGGTTGATTTCCCTAAAGAAGACAGGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGAAGGCTGCAAGGCCAGGTTGATTTCCCTAAAGAAGACAGGGT  735

seq1  ATTAGGAACCTTGGTTTTATGTGATATTCATGTTATCAGTGAGTCGATGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAACCTTGGTTTTATGTGATATTCATGTTATCAGTGAGTCGATGT  785

seq1  TATTTCAGAAGCAGACTTATTTCAGACAAAAAGAAATCAGCCGATTGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAGAAGCAGACTTATTTCAGACAAAAAGAAATCAGCCGATTGTTG  835

seq1  ATTCAGTTCAACTCTTCTAGCAAGACAATAATCTCTCACTTCAGTATGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTCAACTCTTCTAGCAAGACAATAATCTCTCACTTCAGTATGTC  885

seq1  CAGGCCTCATTTTGGTTGTATTACAGACAGCATAGCTTAGACTTAATTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTCATTTTGGTTGTATTACAGACAGCATAGCTTAGACTTAATTAT  935

seq1  TCCAGCGCCTCAGCCTTCATGCAGGTCTTTTATTCATTTGTATGTGAACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCGCCTCAGCCTTCATGCAGGTCTTTTATTCATTTGTATGTGAACA  985

seq1  ATGACAATACAGAAAAAAATAATTGTATGATGAATTC  1036
      |||||||||||||||||||||||||||||||||||||
seq2  ATGACAATACAGAAAAAAATAATTGTATGATGAATTC  1022