BAC Information

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BAC

Clone NameB6Ng01-019B18
Chromosome6 (Build37)3 (Build37)
Map Location 18,835,442 - 18,835,968131,227,351 - 131,228,373
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019B18.bB6Ng01-019B18.g
ACCDH852298DH852299
length9951,025
definitionDH852298|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B18, 5' end.DH852299|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(131,227,351 - 131,228,373)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccaattagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattga
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcgggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggtttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatcttgccatct
tctgagatcttctttaatttctttcttcagagacttgaagtttttatcat
acagatctttcacttccttagttagagtcactccgagatattttatatta
tttgtgactattgagagggtgttgtttccctaatttcttctcagc
gaattcacttaagtaatcctactttttgcagggctgggaaacattttttc
aaagtcggcctagttgacaagcgcacacatcgagcctgtgcagtgtttgc
ggaagaaaagctagagagcagcaggagcccacgtcagcttcttcccctac
cagcctcagctctagggagcgtctcccacgcccagctctgcaggcgtcgc
tccgcctcgctcactgcgcatgctcagcatctgaaggctctcttcaacaa
accctcagaccacgcccctcgtcctgggtcaaggcggagcttcaagcgcc
cctcctggtgattggatgttgaggtctcgaccccgcgcctccgcttcgcc
ccgccctccacgctgctcggatgcctagctccagccgaggcgatcactag
ctggagcgcacgtcagcgcgcgcctgagcccggggtgcaggccccgcccc
ttctccctgctccgccccgcccctcggcctctctcccactgctcggcccc
ggggctctcagcagcagtgcatccgcgctccgcggccatggagattcctg
ggagtctgtgcaagaaagtcaagctgagcaataacgcgcagaactgggtg
agtggtggccgcaggccggagcgcggggagcgtgggtggctgtgggaacc
gcgggctgcccgtgcatcctgcgggagccgggggcggggacccgggcggc
ggcggccggtgaaggcgagtccaggcccggagctgtcccctaggctgggc
gaggcggagggctgcggcggaggcagacggaggcgcctctgcacgttccg
ggtgttgcttggcccaggtttgggtcggtctccgagttttacgtttctga
gttgcagtgtactgagagaataacaatgtggtcattcatggatcgggact
gcaggactgaggttctttgtgtctctgttttaaattggattgtcggacac
agacttacttttaaggactcgattctgggtacagttaaggtgtgggaagg
attatagtttctaacaattgaacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-019B18.b_49_576 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAATTGGATCAAAGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || |  ||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr3_131227351_131228373
seq2: B6Ng01-019B18.g_69_1093

seq1  GAATTCACTTAAGTAATCCTACTTTTTGCAGGGCTGGGAAACATTTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAAGTAATCCTACTTTTTGCAGGGCTGGGAAACATTTTTTC  50

seq1  AAAGTCGGCCTAGTTGACAAGCGCACACATCGAGCCTGTGCAGTGTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCGGCCTAGTTGACAAGCGCACACATCGAGCCTGTGCAGTGTTTGC  100

seq1  GGAAGAAAAGCTAGAGAGCAGCAGGAGCCCACGTCAGCTTCTTCCCCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAAGCTAGAGAGCAGCAGGAGCCCACGTCAGCTTCTTCCCCTAC  150

seq1  CAGCCTCAGCTCTAGGGAGCGTCTCCCACGCCCAGCTCTGCAGGCGTCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCAGCTCTAGGGAGCGTCTCCCACGCCCAGCTCTGCAGGCGTCGC  200

seq1  TCCGCCTCGCTCACTGCGCATGCTCAGCATCTGAAGGCTCTCTTCAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCTCGCTCACTGCGCATGCTCAGCATCTGAAGGCTCTCTTCAACAA  250

seq1  ACCCTCAGACCACGCCCCTCGTCCTGGGTCAAGGCGGAGCTTCAAGCGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGACCACGCCCCTCGTCCTGGGTCAAGGCGGAGCTTCAAGCGCC  300

seq1  CCTCCTGGTGATTGGATGTTGAGGTCTCGACCCCGCGCCTCCGCTTCGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGTGATTGGATGTTGAGGTCTCGACCCCGCGCCTCCGCTTCGCC  350

seq1  CCGCCCTCCACGCTGCTCGGATGCCTAGCTCCAGCCGAGGCGATCACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCTCCACGCTGCTCGGATGCCTAGCTCCAGCCGAGGCGATCACTAG  400

seq1  CTGGAGCGCACGTCAGCGCGCGCCTGAGCCCGGGGTGCAGGCCCCGCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCGCACGTCAGCGCGCGCCTGAGCCCGGGGTGCAGGCCCCGCCCC  450

seq1  TTCTCCCTGCTCCGCCCCGCCCCTCGGCCTCTCTCCCACTGCTCGGCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTGCTCCGCCCCGCCCCTCGGCCTCTCTCCCACTGCTCGGCCCC  500

seq1  GGGGCTCTCAGCAGCAGTGCATCCGCGCTCCGCGGCCATGGAGATTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCTCAGCAGCAGTGCATCCGCGCTCCGCGGCCATGGAGATTCCTG  550

seq1  GGAGTCTGTGCAAGAAAGTCAAGCTGAGCAATAACGCGCAGAACTGGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTGTGCAAGAAAGTCAAGCTGAGCAATAACGCGCAGAACTGGGTG  600

seq1  AGTGGTGGCCGCAGGCCGGAGCGCGGGGAGCGTGGGTGGCTGTGGGAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGGCCGCAGGCCGGAGCGCGGGGAGCGTGGGTGGCTGTGGGAACC  650

seq1  GCGGGCTGCCCGTGCATCCTGCGGGAGCCGGGGGCGGGGACCCGGGCGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCTGCCCGTGCATCCTGCGGGAGCCGGGGGCGGGGACCCGGGCGGC  700

seq1  GGCGGCCGGTGAAGGCGAGTCCAGGCCCGGAGCTGTCCCCTAGGCT-GGC  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGCGGCCGGTGAAGGCGAGTCCAGGCCCGGAGCTGTCCCCTAGGCTGGGC  750

seq1  GAGGCGGAGGGCTGCGGCGGAGGCAGACGGAGGCGCCTCTGCACGTTCCG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGGAGGGCTGCGGCGGAGGCAGACGGAGGCGCCTCTGCACGTTCCG  800

seq1  GGTG-TGCTTGGCCCAGGTTTGGGTCGGTCTCCGAGTCTTTACGTTTCTG  848
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGTGTTGCTTGGCCCAGGTTTGGGTCGGTCTCCGAGT-TTTACGTTTCTG  849

seq1  AGTTGCAGTGTACTGAGAGAATAACAATGTGGTCATTCATGGATCGGGAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAGTGTACTGAGAGAATAACAATGTGGTCATTCATGGATCGGGAC  899

seq1  TGCAGGACTGAGGTTCTTTGTGTCTCTGTTTTAAATTGGAATGTCGGACA  948
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCAGGACTGAGGTTCTTTGTGTCTCTGTTTTAAATTGGATTGTCGGACA  949

seq1  CAGACATACTTTTAAAGACTCGATTTCTGGTGACAGTT-AGGTGTGGGAA  997
      ||||| ||||||||| ||||||| ||||||  |||||| |||||||||||
seq2  CAGACTTACTTTTAAGGACTCGA-TTCTGGGTACAGTTAAGGTGTGGGAA  998

seq1  GATTAATAGTTTCTAAC-ATTGAACAG  1023
      |  | |||||||||||| |||||||||
seq2  GGATTATAGTTTCTAACAATTGAACAG  1025