BAC Information

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BAC

Clone NameB6Ng01-019E22
Chromosome6 (Build37)7 (Build37)
Map Location 18,835,452 - 18,835,968101,598,632 - 101,599,741
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019E22.bB6Ng01-019E22.g
ACCDH852440DH852441
length9481,109
definitionDH852440|Mus musculus domesticus DNA, BAC clone: B6Ng01-019E22, 5' end.DH852441|Mus musculus domesticus DNA, BAC clone: B6Ng01-019E22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(101,598,632 - 101,599,741)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagata
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatatttatatta
gaattccaaaagtgagtgctccctcccctgagagctacttttcatttcta
tttcaagaggacagatagatggacaggcaattggttatttgagaaggtaa
atcaagtgttacctgaaactaaagtaatatctctatatacccattaactg
tactttattttcaccacttgatgggagagttttggtttgcaaatatgttt
tgaataatgaggaaactgcaagtgcttaggtacgttctggaaatgtcttg
taacaacttgaaaaaaaactcagtcagattgaaaacatgttcttatttta
caaagccatctttacaaatatttgtctgtcaatgtttaattaccagaaaa
tggaacctgtcaacacgcttctcgaatttaggaagctaaccaccttccct
gataaatgtgcagtcataagtttcccatgctcaatttgtaccctaattaa
atccatagtttcaacttgtattgagggtgtttaaagagtctggggaggga
tcgttattctataaacgttatgagaagtgttttctatgagttatttaata
atcagaagtaattgacagcttaatattttatatgtgaaaaaagtagtggc
atgaaagcaagtttcatgtcttgtaaaaggaagtatagttagactttaag
ccatgactgctttaatcaaaacacgttacctgtagcatattttctagttt
ccatttgtggagcattatcccaactttggaaataacattttaaatagagc
aagaaaataaaactcatacattcaaatgtacctgagtttagaatttcagt
tgaatgattgtaagtcctagcttagaatttatataaccgcaaacacttta
ctttctttatctgtgtaatgggtatattatttattgcacagatgtcgtca
gattacgcacttagcatattgactgacgtatataaatggcattggaaatg
acttctggtgtcattatcaatgtcaactcaagtcatcctggctactgtgg
tctatgaactccttattcccccaggtacaaatgactttcttcacattatt
caggaaacttcaacatctattcaagttatctttcccatctatcgcaaaac
tttatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-019E22.b_47_564 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      || ||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||| |||||||||||||||||||| |||| ||||||||||||
seq2  AGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr7_101598632_101599741
seq2: B6Ng01-019E22.g_66_1174 (reverse)

seq1  ATATATTAAAGGTTTTGCGATAGATGGTGAAGATAACTTGAATAGATGTT  50
      ||||||  || ||||||||||||||||  |||||||||||||||||||||
seq2  ATATAT--AAAGTTTTGCGATAGATGGGAAAGATAACTTGAATAGATGTT  48

seq1  GAAGTTTCCTTGAATAATGTGAAGAAAGTCA-TTGTACCTGGGAGAATAA  99
      ||||||||| ||||||||||||||||||||| ||||||||||| ||||||
seq2  GAAGTTTCC-TGAATAATGTGAAGAAAGTCATTTGTACCTGGGGGAATAA  97

seq1  GGAGTTCATAGA-CACAGTAGCCAGGATGACTTGAGTTGACATTGATAAT  148
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCATAGACCACAGTAGCCAGGATGACTTGAGTTGACATTGATAAT  147

seq1  GACACCAGAAGTCATTTCCAATGCCATTTATATACGTCAGTCAATATGCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGAAGTCATTTCCAATGCCATTTATATACGTCAGTCAATATGCT  197

seq1  AAGTGCCTAATCTGACGACATCTGTGCAATAAATAATATACCCATTACAC  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCGTAATCTGACGACATCTGTGCAATAAATAATATACCCATTACAC  247

seq1  AGATAAAGAAAGTAAAGTGTTTGCGGTTATATAAATTCTAAGCTAGGACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGAAAGTAAAGTGTTTGCGGTTATATAAATTCTAAGCTAGGACT  297

seq1  TACAATCATTCAACTGAAATTCTAAACTCAGGTACATTTGAATGTATGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCATTCAACTGAAATTCTAAACTCAGGTACATTTGAATGTATGAG  347

seq1  TTTTATTTTCTTGCTCTATTTAAAATGTTATTTCCAAAGTTGGGATAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTCTTGCTCTATTTAAAATGTTATTTCCAAAGTTGGGATAATG  397

seq1  CTCCACAAATGGAAACTAGAAAATATGCTACAGGTAACGTGTTTTGATTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAAATGGAAACTAGAAAATATGCTACAGGTAACGTGTTTTGATTA  447

seq1  AAGCAGTCATGGCTTAAAGTCTAACTATACTTCCTTTTACAAGACATGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTCATGGCTTAAAGTCTAACTATACTTCCTTTTACAAGACATGAA  497

seq1  ACTTGCTTTCATGCCACTACTTTTTTCACATATAAAATATTAAGCTGTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTTTCATGCCACTACTTTTTTCACATATAAAATATTAAGCTGTCA  547

seq1  ATTACTTCTGATTATTAAATAACTCATAGAAAACACTTCTCATAACGTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCTGATTATTAAATAACTCATAGAAAACACTTCTCATAACGTTT  597

seq1  ATAGAATAACGATCCCTCCCCAGACTCTTTAAACACCCTCAATACAAGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATAACGATCCCTCCCCAGACTCTTTAAACACCCTCAATACAAGTT  647

seq1  GAAACTATGGATTTAATTAGGGTACAAATTGAGCATGGGAAACTTATGAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATGGATTTAATTAGGGTACAAATTGAGCATGGGAAACTTATGAC  697

seq1  TGCACATTTATCAGGGAAGGTGGTTAGCTTCCTAAATTCGAGAAGCGTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATTTATCAGGGAAGGTGGTTAGCTTCCTAAATTCGAGAAGCGTGT  747

seq1  TGACAGGTTCCATTTTCTGGTAATTAAACATTGACAGACAAATATTTGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGTTCCATTTTCTGGTAATTAAACATTGACAGACAAATATTTGTA  797

seq1  AAGATGGCTTTGTAAAATAAGAACATGTTTTCAATCTGACTGAGTTTTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCTTTGTAAAATAAGAACATGTTTTCAATCTGACTGAGTTTTTT  847

seq1  TTCAAGTTGTTACAAGACATTTCCAGAACGTACCTAAGCACTTGCAGTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTTGTTACAAGACATTTCCAGAACGTACCTAAGCACTTGCAGTTT  897

seq1  CCTCATTATTCAAAACATATTTGCAAACCAAAACTCTCCCATCAAGTGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTATTCAAAACATATTTGCAAACCAAAACTCTCCCATCAAGTGGT  947

seq1  GAAAATAAAGTACAGTTAATGGGTATATAGAGATATTACTTTAGTTTCAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAGTACAGTTAATGGGTATATAGAGATATTACTTTAGTTTCAG  997

seq1  GTAACACTTGATTTACCTTCTCAAATAACCAATTGCCTGTCCATCTATCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACTTGATTTACCTTCTCAAATAACCAATTGCCTGTCCATCTATCT  1047

seq1  GTCCTCTTGAAATAGAAATGAAAAGTAGCTCTCAGGGGAGGGAGCACTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTTGAAATAGAAATGAAAAGTAGCTCTCAGGGGAGGGAGCACTCA  1097

seq1  CTTTTGGAATTC  1110
      ||||||||||||
seq2  CTTTTGGAATTC  1109