BAC Information

Click to search

BAC

Clone NameB6Ng01-019F16
Chromosome6 (Build37)7 (Build37)
Map Location 18,835,442 - 18,835,96869,596,731 - 69,597,791
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019F16.bB6Ng01-019F16.g
ACCDH852466DH852467
length9961,061
definitionDH852466|Mus musculus domesticus DNA, BAC clone: B6Ng01-019F16, 5' end.DH852467|Mus musculus domesticus DNA, BAC clone: B6Ng01-019F16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(69,596,731 - 69,597,791)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctataccattgg
tccactcgtctgtctctatacctgtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatatttatatattt
gtggctatgagaaggtgttgtttccctaattctttctcagcctgtt
gaattcacatgaattatggtgtttctcattgtcctagtacacctgattta
atagagagtagagtgtctccaacaaagccatagagaacaccatgaaggga
gaagggacaagggctggctgtccaggtaggaggtaaacctctgttgtttt
tattggtaatggaggctattagttttatacttccatcttaaatttatttt
tctatggtccctgtgctagagttgatggtagacagtttactaacagaaaa
ccaaactcagccagctcctgccccaacctcctagcctgggaaagccattt
catatgcaaaaatctggcttttacttagagctgctaggactcctgctgag
aaatgcaaagggacgggaagtttttctttcggataggcttcaagctgtga
aaggcaaacacacaggcagatttgttcaccttgcctgcaggctacatgct
gacaaaggtaaactgacaaataacaggtttcaatctttaaaaaagaaatg
ttttttactcttccttcacttaaacaaattgcttttcaatgaccccagta
atcagtaatatgtgtctcgtggttaaaggttggatgtttccaactgaaag
gggggaaaatgtttgaagtttgtgttgtagacatctgacaaaactattta
aggtacgtgaaaatgatattaaggatggcacatgatattgggatctcaaa
gttcagagtcttaacatattaatcagtgaaatactgtcatgggagaactt
aggaaaaataattatagtaggaatgaaaatattttatacagatgattacc
attttcaccccatatttctagaatactcaatcatagagatgaataatggt
acaaattttgaggtttattagcataaccagctttctggagaacctgcccc
aagtctctcagatactttctacacagttgcaccgggatctgtttatttat
ttaataggaccgtttggcgatcgatgctcttcagcttgagcaaagaatta
gtggtggattagagaggatcagaatcacccaagatgaaacttctgggatg
ttttcctgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-019F16.b_47_574 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| |||||||||||||||||||| |||| ||
seq2  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr7_69596731_69597791
seq2: B6Ng01-019F16.g_69_1129 (reverse)

seq1  TCTCAGGAAACACATCCCAGAAGATTTCATCTT-GGTGATTCTGATCCTC  49
      |||||||||| |||||||||||| ||||||||| ||||||||||||||||
seq2  TCTCAGGAAA-ACATCCCAGAAG-TTTCATCTTGGGTGATTCTGATCCTC  48

seq1  TCTTAATCACCACTAATTTCTTTGCTCAAGCTGAAGAGCATCGATCGCCA  99
      ||| |  ||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTAATCCACCACTAA-TTCTTTGCTCAAGCTGAAGAGCATCGATCGCCA  97

seq1  AACGGTCCTATTAAATAAATAAACAGAT-CCGGTGCCAACTGTGTAG-AA  147
      |||||||||||||||||||||||||||| |||||| ||||||||||| ||
seq2  AACGGTCCTATTAAATAAATAAACAGATCCCGGTG-CAACTGTGTAGAAA  146

seq1  GTATCTGAGAGACTTGGGGCAGGTTCTCCAGAAAGCTGGTTATGCTAATA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGAGAGACTTGGGGCAGGTTCTCCAGAAAGCTGGTTATGCTAATA  196

seq1  AACCTC-AAATTTGTACCATTATTCATCTCTATGATTGAGTATTCTAGAA  246
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAAAATTTGTACCATTATTCATCTCTATGATTGAGTATTCTAGAA  246

seq1  ATATGGGGTGAAAATGGTAATCATCTGTATAAAATATTTTCATTCCTACT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGGTGAAAATGGTAATCATCTGTATAAAATATTTTCATTCCTACT  296

seq1  ATAATTATTTTTCCTAAGTTCTCCCATGACAGTATTTCACTGATTAATAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTTTTCCTAAGTTCTCCCATGACAGTATTTCACTGATTAATAT  346

seq1  GTTAAGACTCTGAACTTTGAGATCCCAATATCATGTGCCATCCTTAATAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGACTCTGAACTTTGAGATCCCAATATCATGTGCCATCCTTAATAT  396

seq1  CATTTTCACGTACCTTAAATAGTTTTGTCAGATGTCTACAACACAAACTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCACGTACCTTAAATAGTTTTGTCAGATGTCTACAACACAAACTT  446

seq1  CAAACATTTTCCCCCCTTTCAGTTGGAAACATCCAACCTTTAACCACGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTTTCCCCCCTTTCAGTTGGAAACATCCAACCTTTAACCACGAG  496

seq1  ACACATATTACTGATTACTGGGGTCATTGAAAAGCAATTTGTTTAAGTGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATTACTGATTACTGGGGTCATTGAAAAGCAATTTGTTTAAGTGA  546

seq1  AGGAAGAGTAAAAAACATTTCTTTTTTAAAGATTGAAACCTGTTATTTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGTAAAAAACATTTCTTTTTTAAAGATTGAAACCTGTTATTTGT  596

seq1  CAGTTTACCTTTGTCAGCATGTAGCCTGCAGGCAAGGTGAACAAATCTGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTACCTTTGTCAGCATGTAGCCTGCAGGCAAGGTGAACAAATCTGC  646

seq1  CTGTGTGTTTGCCTTTCACAGCTTGAAGCCTATCCGAAAGAAAAACTTCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTTTGCCTTTCACAGCTTGAAGCCTATCCGAAAGAAAAACTTCC  696

seq1  CGTCCCTTTGCATTTCTCAGCAGGAGTCCTAGCAGCTCTAAGTAAAAGCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCTTTGCATTTCTCAGCAGGAGTCCTAGCAGCTCTAAGTAAAAGCC  746

seq1  AGATTTTTGCATATGAAATGGCTTTCCCAGGCTAGGAGGTTGGGGCAGGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTGCATATGAAATGGCTTTCCCAGGCTAGGAGGTTGGGGCAGGA  796

seq1  GCTGGCTGAGTTTGGTTTTCTGTTAGTAAACTGTCTACCATCAACTCTAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGAGTTTGGTTTTCTGTTAGTAAACTGTCTACCATCAACTCTAG  846

seq1  CACAGGGACCATAGAAAAATAAATTTAAGATGGAAGTATAAAACTAATAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGACCATAGAAAAATAAATTTAAGATGGAAGTATAAAACTAATAG  896

seq1  CCTCCATTACCAATAAAAACAACAGAGGTTTACCTCCTACCTGGACAGCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTACCAATAAAAACAACAGAGGTTTACCTCCTACCTGGACAGCC  946

seq1  AGCCCTTGTCCCTTCTCCCTTCATGGTGTTCTCTATGGCTTTGTTGGAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGTCCCTTCTCCCTTCATGGTGTTCTCTATGGCTTTGTTGGAGA  996

seq1  CACTCTACTCTCTATTAAATCAGGTGTACTAGGACAATGAGAAACACCAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTACTCTCTATTAAATCAGGTGTACTAGGACAATGAGAAACACCAT  1046

seq1  AATTCATGTGAATTC  1061
      |||||||||||||||
seq2  AATTCATGTGAATTC  1061