BAC Information

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BAC

Clone NameB6Ng01-019H12
Chromosome6 (Build37)10 (Build37)
Map Location 18,835,448 - 18,835,96827,667,879 - 27,668,108
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019H12.bB6Ng01-019H12.g
ACCDH852544DH852545
length955230
definitionDH852544|Mus musculus domesticus DNA, BAC clone: B6Ng01-019H12, 5' end.DH852545|Mus musculus domesticus DNA, BAC clone: B6Ng01-019H12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(27,667,879 - 27,668,108)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaatgatcctttcccaatctgttggtggtct
ttttgtcttactgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcgcttgtcgaagatcaagt
gaccataagtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaatttgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagaccttctttaatttctttcttcagagatttgaagttttatcatac
agatctttcgcttccttagttagagtcacaccaaggtattttatattatt
tgtga
tttatctaaccttcaaagcccttcctacttggctaaaacatacatttgtt
ttcatccattattcttactgtaaaaaagattgaggagaatgagagagaga
gagagagagagagagagagagagagagagagagagagagagagatacaga
gaggagacagagacagatacacacacagagagagacagagacagaaacag
acacagagagaggggagggaggggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-019H12.b_50_571 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  ATGAACCCACACACTTATGGTCACTTGATCTTCGACAAGCGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| ||| |||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTACTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||| ||| ||||||||||||||||||||||||||||||||||||| 
seq2  AGACACCATCAGTAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCA  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr10_27667879_27668108
seq2: B6Ng01-019H12.g_73_302 (reverse)

seq1  CCTCCTCCCCTCCCTCCCCTCTCTCTGTGTCTGTTTCTGTCTCTGTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCCCTCCCTCCCCTCTCTCTGTGTCTGTTTCTGTCTCTGTCTCT  50

seq1  CTCTGTGTGTGTATCTGTCTCTGTCTCCTCTCTGTATCTCTCTCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTGTGTATCTGTCTCTGTCTCCTCTCTGTATCTCTCTCTCTCTC  100

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCTCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCTCCTCA  150

seq1  ATCTTTTTTACAGTAAGAATAATGGATGAAAACAAATGTATGTTTTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTACAGTAAGAATAATGGATGAAAACAAATGTATGTTTTAGCC  200

seq1  AAGTAGGAAGGGCTTTGAAGGTTAGATAAA  230
      ||||||||||||||||||||||||||||||
seq2  AAGTAGGAAGGGCTTTGAAGGTTAGATAAA  230