BAC Information

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BAC

Clone NameB6Ng01-019I06
Chromosome6 (Build37)
Map Location 18,835,391 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019I06.bB6Ng01-019I06.g
ACCDH852580DH852581
length1,185932
definitionDH852580|Mus musculus domesticus DNA, BAC clone: B6Ng01-019I06, 5' end.DH852581|Mus musculus domesticus DNA, BAC clone: B6Ng01-019I06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttatctaaatcatattctctaaaacatctttgagagaatg
taatacatattgtcataaatggttgatttagggaatttactatgaattat
ttctaatagttgttacacaaaatagtgacataaatatgaactattacaca
tttcttacggcagtatcttccagttgtatctctttgtggatgactattat
tcaaagaagattctaagaaagcaaactgttcactatcctgctaaagcatt
ggtcgtgtgaaaaagcaatctttcaggtcattattatttaaagccataac
ctaaataacaaagattgtacagggaatcaatgctgtaaaggaatcattgg
atgaatttctttggtaactgctcttaaatctgttgtcatcctccattttc
ctgattacttctttacaacagacacagggcaattccaagcactgttagac
ttttatatatattgagctgccagctgttttactaccaattgttcacgtgt
ctgcaacttttcttctgttgtgagccactgctcttgacattgataaccat
tttaggagcaaggttgttcatatgtcagcaattgttattatttttttaat
tttcttttttatttgttattctattaattttcatttcaaatgtcattcaa
cttcctgtttcatctccacaagtcccctaccctgtctccttcctcctgct
cctatgagggtgctcgcccaccaacccatcaactcctacctcacacccct
agaattcccctatattggagcatcgagacttcaaaggacaaaaagcttcc
cttctcattgatgtcagataaagctatcctctgatacaaatgccactgga
gccatggatacatccatgtgtattccttgtttggtgttttatccctgggg
agctctggggtctggttgttgacattgttgttcttcctatggggttacaa
acccttttaacgccttcatactttccctactcctcattgtgatccctgtg
ttcagtgcaatggtgctacaggcatcacatctgttatggttcagctctgc
caagcttctcaatataaacgctatatcagtttctgccacctatccttgcc
acttaccaatgtcaggtttgtactacaaagagtaccctgaaggaatctcc
gtcaccttctctggttctcaaaaaacatcggcata

gaattctttgttcagttctgagccccattttttaattgggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
tatctgatttaggataggtaatgatcctttcccaatctgttggtggtctt
tttgtcttattgatggtgtcttttgccttgcagaagctttggagtttcat
gaggtcccatttgtcaattctcaatcttacagcaaggccattgctgttct
actcacgaatttttcccctgtgcccatatcttcgaggcttttccccactt
tctcctctataagtttcagtgtctctggttttatgtggagttccttgatc
cacttagacttgaccttagtacaagtggataagaatggatcaatttgcat
tctccaacatgataactgccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggatggtttttgctcccttttcaaagatcaagtga
ccataggtgtgtgggctcatttctgggtcttcaatgctattccattggtc
tacctgtctgttgccctaccagtaccatgcattttttttcacaattgctc
tgtatacagctttaggtcaggcatggtgattccaccagaatttcttttat
ccttgagaagagtttttgctatcctaggttttttgttattccagatgaat
ttacaaattgccctttttatttcattgactatcatttgggattaaaagta
tgtgccagtgctgagccatgccacaattagatttagtttttttcagtaaa
tacatattctttgtgttcacagtgtgatgaaatatccagaaacataggcc
acataacccaattatcaggctcatagggagttacaaaaactcagtgacaa
agacaggccctgatgggtaggtcctagatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835391_18835968
seq2: B6Ng01-019I06.g_68_644 (reverse)

seq1  TGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGA  50
      |||||||||||  |  ||||||| ||||||||||||||||| ||||||||
seq2  TGGTACTGGTAGGGCAACAGACAGGTAGACCAATGGAATAGCATTGAAGA  50

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  100
      |||||| |||| ||||||||||||||||||||||||||| || |||||||
seq2  CCCAGAAATGAGCCCACACACCTATGGTCACTTGATCTTTGAAAAGGGAG  100

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  150
      | ||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  CAAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGG  150

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  200
      |||||||||  |||||| ||| | ||||||  ||| ||||||| ||||||
seq2  CACAACTGGCAGTTATCATGTTGGAGAATGCAAATTGATCCATTCTTATC  200

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  250
        | |||||||||||||| |||||||||||||||||||| ||||||||||
seq2  CACTTGTACTAAGGTCAAGTCTAAGTGGATCAAGGAACTCCACATAAAAC  250

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTCGAAGAT  300

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGCTGTGCTGTG  350
      ||||||| ||||||||| ||| |||  ||||||||||||||  |||||| 
seq2  ATGGGCACAGGGGAAAAATTCGTGAGTAGAACAGCAATGGCCTTGCTGTA  350

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  400
      || | |||||| |||||||||||||| |||||||||||||| ||||||||
seq2  AGATTGAGAATTGACAAATGGGACCTCATGAAACTCCAAAGCTTCTGCAA  400

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  450
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  450

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  500
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGATCATTACCTATCCTAAATCAGATA-GGGACTAATATCCAACATATAT  499

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  550
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCAATTAAAAA  549

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  578
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  577


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