BAC Information

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BAC

Clone NameB6Ng01-019M17
Chromosome6 (Build37)
Map Location 53,595,341 - 53,706,550
singlet/doubletdoublet
Overlap geneCreb5
Upstream geneTax1bp1, Jazf1, LOC666259, LOC666516, D430007I03
Downstream geneLOC384386, 1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926, Wipf3, Scrn1, Fkbp14, Plekha8, LOC100041292, 2410066E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019M17.bB6Ng01-019M17.g
ACCDH852780DH852781
length878488
definitionDH852780|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M17, 5' end.DH852781|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,705,674 - 53,706,550)(53,595,341 - 53,595,834)
sequence
gaattctgccactgtgtcttattctgcctactttgatttgctagtatttt
taaacactagaaatggttttaagttacctaatcaaagaatatgccggaaa
tgcaaacctaataagagctttgaggtttgaagttgaactacccaaacttt
ctaacactgttaggaattttcagaattctgctctataaaggcgagcgatg
cctgatgttggtttctcttcctgctggtacagtttcatggggaaatctga
tgaatgaatgtcctgatccacagtgtcaatgggcggagttaagtgtgaag
ggggttgggggagaggcactgctttttctatggctgtctcacctagcaag
tggcagcgatccatgccagcttgctcctaggaccagacattgttttccaa
ctctcaccttccctccccactaccacccacccacccaaggtttgagatct
caaacactgcaggtgagaggagatggtagcagcttgcccagttataaacc
ttcagaaacagcatcggattaggtcctaccagtcaggactcacaaccccc
accccaacactaaacagcttcatgcttttctgttccatgtaatggaggta
cactgacattcttcaagccccagtttggaaatcccaggatgtcagatcca
gtttgtgaacctggctctcttcctcatcctcagcacagtttgaaagagaa
caggcatccgtgattggctggattggttgatgatgctttgaaaggccact
gtccattcattttagggagagttacccattcaaggatattgcacagctgc
tgccctcaagacagcacgtgacttcctgcaggctcacaggtcaccggggc
tgctctccatgttatggtgcccaccttt
agaccctgagatgtacacattacacaaacacaatatttccttgtatactt
gctgtatgctagttcaacaggggtagtttctttctgtagtttgcttttaa
agacaggttactcttgattagggggttggggtagggagaaaattgtcttc
aagactgtaaagccctctggcttgtcgttccactggcatccagcatcagt
caagtttcccaggaacttaaatgtatttctcctggtatcttcaactgccc
tttatcccccctgtgtcttttcagggaagctttcaataggtatcccaggt
tggcttcaaacactggatcctctctctcctcagccatcccaaccctgaga
ttatatgcatgtgccaccatgaccagattcctatcacaccttcaccttga
caaggcatctatctctttgccctgcacctctctttctgactgccttgtta
cttacaacattaacctggacacaagaagggtctttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_53705674_53706550
seq2: B6Ng01-019M17.b_47_923 (reverse)

seq1  AAGGTGGGCACCATAACATGGATGAGCAGCCCCGGTGACCTGTGAGCCTG  50
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGGTGGGCACCATAACATGGA-GAGCAGCCCCGGTGACCTGTGAGCCTG  49

seq1  CAGGAAGTCACGTGCTGTCTTGAGGGCAGCAGCTGTTGCAATATCCTTGA  100
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGGAAGTCACGTGCTGTCTTGAGGGCAGCAGCTG-TGCAATATCCTTGA  98

seq1  ATGGGTAACTCTCCCTTAAATGAATGGACAGTGGCC-TTCAAAGCATCAT  149
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  ATGGGTAACTCTCCCTAAAATGAATGGACAGTGGCCTTTCAAAGCATCAT  148

seq1  CAACCAATCCAGCCAATCACGGATGCCTGTTCTCTTTCAAACTGTGCTGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAATCCAGCCAATCACGGATGCCTGTTCTCTTTCAAACTGTGCTGA  198

seq1  GGATGAGGAAGAGAGCCAGGTTCAC-AACTGGATCTGACATCCTGGGATT  248
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGATGAGGAAGAGAGCCAGGTTCACAAACTGGATCTGACATCCTGGGATT  248

seq1  TCCAAACTGGGGCTTGAAGAATGTCAGTGTACCTCCATTACATGGAACAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTGGGGCTTGAAGAATGTCAGTGTACCTCCATTACATGGAACAG  298

seq1  AAAAGCATGAAGCTGTTTAGTGTTGGGGTGGGGGTTGTGAGTCCTGACTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATGAAGCTGTTTAGTGTTGGGGTGGGGGTTGTGAGTCCTGACTG  348

seq1  GTAGGACCTAATCCGATGCTGTTTCTGAAGGTTTATAACTGGGCAAGCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGACCTAATCCGATGCTGTTTCTGAAGGTTTATAACTGGGCAAGCTG  398

seq1  CTACCATCTCCTCTCACCTGCAGTGTTTGAGATCTCAAACCTTGGGTGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATCTCCTCTCACCTGCAGTGTTTGAGATCTCAAACCTTGGGTGGG  448

seq1  TGGGTGGTAGTGGGGAGGGAAGGTGAGAGTTGGAAAACAATGTCTGGTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGTAGTGGGGAGGGAAGGTGAGAGTTGGAAAACAATGTCTGGTCC  498

seq1  TAGGAGCAAGCTGGCATGGATCGCTGCCACTTGCTAGGTGAGACAGCCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCAAGCTGGCATGGATCGCTGCCACTTGCTAGGTGAGACAGCCAT  548

seq1  AGAAAAAGCAGTGCCTCTCCCCCAACCCCCTTCACACTTAACTCCGCCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGCAGTGCCTCTCCCCCAACCCCCTTCACACTTAACTCCGCCCA  598

seq1  TTGACACTGTGGATCAGGACATTCATTCATCAGATTTCCCCATGAAACTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACTGTGGATCAGGACATTCATTCATCAGATTTCCCCATGAAACTG  648

seq1  TACCAGCAGGAAGAGAAACCAACATCAGGCATCGCTCGCCTTTATAGAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCAGGAAGAGAAACCAACATCAGGCATCGCTCGCCTTTATAGAGC  698

seq1  AGAATTCTGAAAATTCCTAACAGTGTTAGAAAGTTTGGGTAGTTCAACTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTGAAAATTCCTAACAGTGTTAGAAAGTTTGGGTAGTTCAACTT  748

seq1  CAAACCTCAAAGCTCTTATTAGGTTTGCATTTCCGGCATATTCTTTGATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTCAAAGCTCTTATTAGGTTTGCATTTCCGGCATATTCTTTGATT  798

seq1  AGGTAACTTAAAACCATTTCTAGTGTTTAAAAATACTAGCAAATCAAAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACTTAAAACCATTTCTAGTGTTTAAAAATACTAGCAAATCAAAGT  848

seq1  AGGCAGAATAAGACACAGTGGCAGAATTC  877
      |||||||||||||||||||||||||||||
seq2  AGGCAGAATAAGACACAGTGGCAGAATTC  877

seq1: chr6_53595341_53595834
seq2: B6Ng01-019M17.g_69_562

seq1  GAATTCAGACCCTGAGATGTACACATTACACAAACACAATATTTCCTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACCCTGAGATGTACACATTACACAAACACAATATTTCCTTGT  50

seq1  ATACTTGCTGTATGCTAGTTCAACAGGGGTAGTTTCTTTCTGTAGTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGCTGTATGCTAGTTCAACAGGGGTAGTTTCTTTCTGTAGTTTGC  100

seq1  TTTTAAAGACAGGTTACTCTTGATTAGGGGGTTGGGGTAGGGAGAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGACAGGTTACTCTTGATTAGGGGGTTGGGGTAGGGAGAAAATT  150

seq1  GTCTTCAAGACTGTAAAGCCCTCTGGCTTGTCGTTCCACTGGCATCCAGC  200
      |||||||||                 ||||||||||||||||||||||||
seq2  GTCTTCAAGNNNNNNNNNNNNNNNNNCTTGTCGTTCCACTGGCATCCAGC  200

seq1  ATCAGTCAAGTTTCCCAGGAACTTAAATGTATTTCTCCTGGTATCTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTCAAGTTTCCCAGGAACTTAAATGTATTTCTCCTGGTATCTTCAA  250

seq1  CTGCCCTTTATCCCCCCTGTGTCTTTTCAGGGAAGCTTTCAATAGGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTTATCCCCCCTGTGTCTTTTCAGGGAAGCTTTCAATAGGTATC  300

seq1  CCAGGTTGGCTTCAAACACTGGATCCTCTCTCTCCTCAGCCATCCCAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTGGCTTCAAACACTGGATCCTCTCTCTCCTCAGCCATCCCAACC  350

seq1  CTGAGATTATAGGCATGTGCCACCATGACCAGATTCCTATCACACCTTCA  400
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTATATGCATGTGCCACCATGACCAGATTCCTATCACACCTTCA  400

seq1  CCTTGACAAGGCATCTATCTCTTTGCCCTGCACCTCTCTTTCTGACTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACAAGGCATCTATCTCTTTGCCCTGCACCTCTCTTTCTGACTGCC  450

seq1  TTGTTACTTACAACATAAACCTGGACACAAGAAGGGTCTTTGAA  494
      |||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGTTACTTACAACATTAACCTGGACACAAGAAGGGTCTTTGAA  494