BAC Information

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BAC

Clone NameB6Ng01-020D16
Chromosome6 (Build37)12 (Build37)
Map Location 18,835,448 - 18,835,96810,772,544 - 10,773,514
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020D16.bB6Ng01-020D16.g
ACCDH853087DH853088
length950971
definitionDH853087|Mus musculus domesticus DNA, BAC clone: B6Ng01-020D16, 5' end.DH853088|Mus musculus domesticus DNA, BAC clone: B6Ng01-020D16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(10,772,544 - 10,773,514)
sequence
gaattctttgttcagttctgagccccattttttaaggggattatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatctgacagcagaagccattggtgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaac
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccactgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagttttatcatac
agatctttcacttccttagttagagtcacgccaagatattttatattatt

gaattcagtgggattaaagaaaaagttgataggaaaaactgaggtatgtt
tgtatagcagtatgagttacttctgaagatagaggatctcacctttgaat
catcctgaactaatgagtcagcagtattgatgggctcatcatgttgcatt
ttcctgactattctgtgaggttaggcattcataaccaaacacctttattt
agtcatttaaagtcaggatgcttaatcgtattattttcagcttctccaag
tctgaaatgaatacatcagaaagtagaactaggggtgtatttgttatatt
aatgcaccttcatgaggacagctcaggctaggctgtttctcagtagttct
gaacttgaagaataatagcacagaagtggacttcccagtgtaccaggcat
tagacaattataatatcagcccatatgtctgatgcaaataggacagtaag
aatgctaaaaatcaccataactgaagaagaatctgcttccagatggcagg
agtaactgatgagtccagatagcagtagaagtgcaggaaggagaggagat
ttaatctctgtgcagagttcaaataggctgggaacagaaggaattctgga
ccttgggcagatattccagagttggattgttgctgcccattgctcaaaga
aatctactcataaataataaagctcagagtagtagttaaggagaatggca
tataccttctctgggaaacagaggactaaaaggaatcagctatccatgtg
agcctactatggttcgattatctgtttaagactaaagaagtggcccccag
tagacagcccagtccagtgtatagggttctagactacctatagggcaggg
ataaaattagattctatagctcatcactatatgaaatttgatacttccca
gagtccatcagaaagagagagagagagagagatcactgatgagagagaga
gatcactgatgtagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-020D16.b_44_565 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCGTTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||| ||||||| | |||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACACCAATGGCTTCTGCTGTCAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||| |||||||||||||||| ||| |||| ||||||||
seq2  CTCAAGAAGGTGGACCTCAGAAAATCAAATAATCCCCTTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr12_10772544_10773514
seq2: B6Ng01-020D16.g_65_1035

seq1  GAATTCAGTGGGATTAAAGAAAAAGTTGATAGGAAAAACTGAGGTATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGGATTAAAGAAAAAGTTGATAGGAAAAACTGAGGTATGTT  50

seq1  TGTATAGCAGTATGAGTTACTTCTGAAGATAGAGGATCTCACCTTTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCAGTATGAGTTACTTCTGAAGATAGAGGATCTCACCTTTGAAT  100

seq1  CATCCTGAACTAATGAGTCAGCAGTATTGATGGGCTCATCATGTTGCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGAACTAATGAGTCAGCAGTATTGATGGGCTCATCATGTTGCATT  150

seq1  TTCCTGACTATTCTGTGAGGTTAGGCATTCATAACCAAACACCTTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGACTATTCTGTGAGGTTAGGCATTCATAACCAAACACCTTTATTT  200

seq1  AGTCATTTAAAGTCAGGATGCTTAATCGTATTATTTTCAGCTTCTCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTAAAGTCAGGATGCTTAATCGTATTATTTTCAGCTTCTCCAAG  250

seq1  TCTGAAATGAATACATCAGAAAGTAGAACTAGGGGTGTATTTGTTATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATGAATACATCAGAAAGTAGAACTAGGGGTGTATTTGTTATATT  300

seq1  AATGCACCTTCATGAGGACAGCTCAGGCTAGGCTGTTTCTCAGTAGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACCTTCATGAGGACAGCTCAGGCTAGGCTGTTTCTCAGTAGTTCT  350

seq1  GAACTTGAAGAATAATAGCACAGAAGTGGACTTCCCAGTGTACCAGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGAAGAATAATAGCACAGAAGTGGACTTCCCAGTGTACCAGGCAT  400

seq1  TAGACAATTATAATATCAGCCCATATGTCTGATGCAAATAGGACAGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAATTATAATATCAGCCCATATGTCTGATGCAAATAGGACAGTAAG  450

seq1  AATGCTAAAAATCACCATAACTGAAGAAGAATCTGCTTCCAGATGGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAAAATCACCATAACTGAAGAAGAATCTGCTTCCAGATGGCAGG  500

seq1  AGTAACTGATGAGTCCAGATAGCAGTAGAAGTGCAGGAAGGAGAGGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTGATGAGTCCAGATAGCAGTAGAAGTGCAGGAAGGAGAGGAGAT  550

seq1  TTAATCTCTGTGCAGAGTTCAAATAGGCTGGGAACAGAAGGAATTCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCTGTGCAGAGTTCAAATAGGCTGGGAACAGAAGGAATTCTGGA  600

seq1  CCTTGGGCAGATATTCCAGAGTTGGATTGTTGCTGCCCATTGCTCAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGCAGATATTCCAGAGTTGGATTGTTGCTGCCCATTGCTCAAAGA  650

seq1  AATCTACTCATAAATAATAAAGCTCAGAGTAGTAGTTAAGGAGAATGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACTCATAAATAATAAAGCTCAGAGTAGTAGTTAAGGAGAATGGCA  700

seq1  TATACCTTCTCTGGGAAACAGAGGACTAAAAGGAAATCAGCTATCCATGT  750
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATACCTTCTCTGGGAAACAGAGGACTAAAAGG-AATCAGCTATCCATGT  749

seq1  GAGCCTACTATGGTTCGATTATCTGTTTAAGACTAAGGAAGTGGCCCCCA  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAGCCTACTATGGTTCGATTATCTGTTTAAGACTAAAGAAGTGGCCCCCA  799

seq1  GTAGACAGCCCAGTCCAGTGGATAGGGTTCTAGACTACCTATAGGGCAGG  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTAGACAGCCCAGTCCAGTGTATAGGGTTCTAGACTACCTATAGGGCAGG  849

seq1  GATAAAATAAGATTCTATAGCTCATCACTATATGAAATTTGATACTTCCC  900
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATTAGATTCTATAGCTCATCACTATATGAAATTTGATACTTCCC  899

seq1  AGAGTCCATCAGAAAGAGAGAGAGAGAGAGAGATCACTGATGAGAGAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCATCAGAAAGAGAGAGAGAGAGAGAGATCACTGATGAGAGAGAG  949

seq1  AGATCACTGATG-AGAGAGAGA  971
      |||||||||||| |||||||||
seq2  AGATCACTGATGTAGAGAGAGA  971