BAC Information

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BAC

Clone NameB6Ng01-020F17
Chromosome6 (Build37)
Map Location 111,013,647 - 111,137,945
singlet/doubletdoublet
Overlap geneGrm7
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020F17.bB6Ng01-020F17.g
ACCDH853179DH853180
length1,019902
definitionDH853179|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F17, 5' end.DH853180|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,137,241 - 111,137,945)(111,013,647 - 111,014,547)
sequence
gaattctttatattctctccattgtttacaagtaaaatgaatagttctgg
taatcttagacaattgatatttttattgtgaaaacaaagaatgaacactg
taaggtaagggagataatcctacaggcatgttcagaccagctcctgagac
actctatttctttttcccttcatctctgtaggacccatgaaccattctca
cgagacatggggagactattacactaacagactttaagatatgaaggtta
tttatgaccacaaaggaaaataataacgttcaataatcaagaggtagtgt
gttagaatttgtgttagaattaaaggtccataacagagcatagttggtcc
taaggaagaagagtgaggctatgggtaatagaaaatatttcctactgctc
atgagtgagattacttacctgtgctcatttcatacacaaattctacacac
atgcacacagcatacatgcacaatatatgtgcttctattattgatctact
agcatatgtgctctaagcctttctttagatgctcattgtaataacgcttt
tatgtagcagtataatttctaatgataatctaaatacttgtctttaatcc
cacaaataattgtagtgctcacctcttataaaagattttttttcagtaga
cagagaccactgttgaaagccacaactggtgaaaaataaaattgatgtga
gtggggtgcccaactccagtgtacacatctacagtgcaatctccgcacca
aaagatcaggaagcatcacagaagatgggatagaagtacagtaagaacca
gaggacctagaaatgtgctgtgagatggcatttttctagacatggtaggg
aagctacacacatgaaacctcagcaagatggctgcttaattaagtctaca
caatggcaacatcagttgagatgccaatgcaaatgagatatatctcacaa
agctctaatctagtgataactagagcaataacagctactgagagcagaga
gtcagttcatgggcccact
gaattctataccccttaatctaacccctaaatggatatagcatttttcct
ttggttataaaggccatgaggcaaatcaactacttgaacttagttctccc
cctactcacaccaaataaagaaagttgagctcagatctttatctctaaga
gcaaagtctgaccaagcctctcaattaaccttgtttcactctttatgttt
aattttggaatttgcctttagattttggcacaaacttattaagacttcag
aaaagggttaacctctgatacttaactcaaagccatataagtggtaatgg
gggaagaacaaaagaaggccaatggagcagctgtactctgcttgaaccct
tgtggtttctcctgctatagaagtggcaagctagttttaggcattcatac
agatcagagatttagaggcagaataaagatgtcctagacagtgaaaaaag
accttggcttttctgccctcccagagcatctgttttgactgggacagttg
ccctcccacttcatgtcactcatagggatcaaattcatcattctatagac
ccagacttacagctagttttctcttcttaagattatgatagcatgtgagc
atactgctcttcacagtatggtttccatgatgcttttctgaggtggtaat
tgaaatttaatgacgtttaaaacagtgtcagcacctcagaccgactgtcc
atgccatctaactttcacatcagtctgaaacccgtctacatgaagtgtct
tcgtgcgctttaaaatgttggcacaggtttcacaaattctggtagctttt
atgattccagcctcatataatgagttaaatataaatctcctggctactga
agcatttatgcagaatagatcatattaatactacaagttttttttttttt
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_111137241_111137945
seq2: B6Ng01-020F17.b_44_748 (reverse)

seq1  CCCACTCACATCAATTTTATTTTTCACCAGTTGTGGCTTTCAACAGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCACATCAATTTTATTTTTCACCAGTTGTGGCTTTCAACAGTGGT  50

seq1  CTCTGTCTACTGAAAAAAAATCTTTTATAAGAGGTGAGCACTACAATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTACTGAAAAAAAATCTTTTATAAGAGGTGAGCACTACAATTAT  100

seq1  TTGTGGGATTAAAGACAAGTATTTAGATTATCATTAGAAATTATACTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGATTAAAGACAAGTATTTAGATTATCATTAGAAATTATACTGCT  150

seq1  ACATAAAAGCGTTATTACAATGAGCATCTAAAGAAAGGCTTAGAGCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAGCGTTATTACAATGAGCATCTAAAGAAAGGCTTAGAGCACAT  200

seq1  ATGCTAGTAGATCAATAATAGAAGCACATATATTGTGCATGTATGCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGTAGATCAATAATAGAAGCACATATATTGTGCATGTATGCTGTG  250

seq1  TGCATGTGTGTAGAATTTGTGTATGAAATGAGCACAGGTAAGTAATCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTGTAGAATTTGTGTATGAAATGAGCACAGGTAAGTAATCTCA  300

seq1  CTCATGAGCAGTAGGAAATATTTTCTATTACCCATAGCCTCACTCTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGCAGTAGGAAATATTTTCTATTACCCATAGCCTCACTCTTCTT  350

seq1  CCTTAGGACCAACTATGCTCTGTTATGGACCTTTAATTCTAACACAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGACCAACTATGCTCTGTTATGGACCTTTAATTCTAACACAAATT  400

seq1  CTAACACACTACCTCTTGATTATTGAACGTTATTATTTTCCTTTGTGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACACTACCTCTTGATTATTGAACGTTATTATTTTCCTTTGTGGTC  450

seq1  ATAAATAACCTTCATATCTTAAAGTCTGTTAGTGTAATAGTCTCCCCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAACCTTCATATCTTAAAGTCTGTTAGTGTAATAGTCTCCCCATG  500

seq1  TCTCGTGAGAATGGTTCATGGGTCCTACAGAGATGAAGGGAAAAAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTGAGAATGGTTCATGGGTCCTACAGAGATGAAGGGAAAAAGAAAT  550

seq1  AGAGTGTCTCAGGAGCTGGTCTGAACATGCCTGTAGGATTATCTCCCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTCTCAGGAGCTGGTCTGAACATGCCTGTAGGATTATCTCCCTTA  600

seq1  CCTTACAGTGTTCATTCTTTGTTTTCACAATAAAAATATCAATTGTCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAGTGTTCATTCTTTGTTTTCACAATAAAAATATCAATTGTCTAA  650

seq1  GATTACCAGAACTATTCATTTTACTTGTAAACAATGGAGAGAATATAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACCAGAACTATTCATTTTACTTGTAAACAATGGAGAGAATATAAAG  700

seq1  AATTC  705
      |||||
seq2  AATTC  705

seq1: chr6_111013647_111014547
seq2: B6Ng01-020F17.g_67_967

seq1  GAATTCTATACCCCTTAATCTAACCCCTAAATGGATATAGCATTTTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATACCCCTTAATCTAACCCCTAAATGGATATAGCATTTTTCCT  50

seq1  TTGGTTATAAAGGCCATGAGGCAAATCAACTACTTGAACTTAGTTCTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTATAAAGGCCATGAGGCAAATCAACTACTTGAACTTAGTTCTCCC  100

seq1  CCTACTCACACCAAATAAAGAAAGTTGAGCTCAGATCTTTATCTCTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTCACACCAAATAAAGAAAGTTGAGCTCAGATCTTTATCTCTAAGA  150

seq1  GCAAAGTCTGACCAAGCCTCTCAATTAACCTTGTTTCACTCTTTATGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTCTGACCAAGCCTCTCAATTAACCTTGTTTCACTCTTTATGTTT  200

seq1  AATTTTGGAATTTGCCTTTAGATTTTGGCACAAACTTATTAAGACTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGAATTTGCCTTTAGATTTTGGCACAAACTTATTAAGACTTCAG  250

seq1  AAAAGGGTTAACCTCTGATACTTAACTCAAAGCCATATAAGTGGTAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGTTAACCTCTGATACTTAACTCAAAGCCATATAAGTGGTAATGG  300

seq1  GGGAAGAACAAAAGAAGGCCAATGGAGCAGCTGTACTCTGCTTGAACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAACAAAAGAAGGCCAATGGAGCAGCTGTACTCTGCTTGAACCCT  350

seq1  TGTGGTTTCTCCTGCTATAGAAGTGGCAAGCTAGTTTTAGGCATTCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTCTCCTGCTATAGAAGTGGCAAGCTAGTTTTAGGCATTCATAC  400

seq1  AGATCAGAGATTTAGAGGCAGAATAAAGATGTCCTAGACAGTGAAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGAGATTTAGAGGCAGAATAAAGATGTCCTAGACAGTGAAAAAAG  450

seq1  ACCTTGGCTTTTCTGCCCTCCCAGAGCATCTGTTTTGACTGGGACAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGCTTTTCTGCCCTCCCAGAGCATCTGTTTTGACTGGGACAGTTG  500

seq1  CCCTCCCACTTCATGTCACTCATAGGGATCAAATTCATCATTCTATAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCACTTCATGTCACTCATAGGGATCAAATTCATCATTCTATAGAC  550

seq1  CCAGACTTACAGCTAGTTTTCTCTTCTTAAGATTATGATAGCATGTGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTTACAGCTAGTTTTCTCTTCTTAAGATTATGATAGCATGTGAGC  600

seq1  ATACTGCTCTTCACAGTATGG-TTCCATGATGC-TTTCTGAGGTGGTAAT  648
      ||||||||||||||||||||| ||||||||||| ||||||||||||||||
seq2  ATACTGCTCTTCACAGTATGGTTTCCATGATGCTTTTCTGAGGTGGTAAT  650

seq1  TGAAATTTAATGACGTTTAAAACAGTGTCAGCACCTCAGACCGACTGTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTAATGACGTTTAAAACAGTGTCAGCACCTCAGACCGACTGTCC  700

seq1  ATGCCATCTAACATTCACATCAGTCTGAAACCCGTCTACATGAAGTGTCT  748
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGCCATCTAACTTTCACATCAGTCTGAAACCCGTCTACATGAAGTGTCT  750

seq1  TCGTGCGCTTTAAAATGTTGGCACAGGTTTCAACAGATTCTGGTAGCATT  798
      ||||||||||||||||||||||||||||||| ||| ||||||||||| ||
seq2  TCGTGCGCTTTAAAATGTTGGCACAGGTTTC-ACAAATTCTGGTAGC-TT  798

seq1  TTATGATTCCAGCCTCATATAATGAGTTAAATATTAATCTCCTGGCTACT  848
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTATGATTCCAGCCTCATATAATGAGTTAAATATAAATCTCCTGGCTACT  848

seq1  GAAGCATTTTATGCAG-ATAGATTCATATT-ATACTACAAGTTTTTTTTT  896
      |||||| ||||||||| ||||| ||||||| |||||||||||||||||||
seq2  GAAGCA-TTTATGCAGAATAGA-TCATATTAATACTACAAGTTTTTTTTT  896

seq1  TTTTT  901
      |||||
seq2  TTTTT  901