BAC Information

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BAC

Clone NameB6Ng01-020I05
Chromosome6 (Build37)
Map Location 78,116,971 - 78,117,452
singlet/doubletsinglet
Overlap genenone
Upstream geneCtnna2, Lrrtm1, LOC668169
Downstream geneEG434050, Pap, Reg3d, Reg3a, Reg2, Reg1, Reg3g, LOC621716, Ppia-ps6_789.1, LOC384440
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020I05.bB6Ng01-020I05.g
ACCDH853289DH853290
length1,143476
definitionDH853289|Mus musculus domesticus DNA, BAC clone: B6Ng01-020I05, 5' end.DH853290|Mus musculus domesticus DNA, BAC clone: B6Ng01-020I05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctctcaa
tgagagctagagaagtacccaggagctaagggatcttcatcctatagtga
cacattatgactaccagtaccctgagctcttgactctagctgcatatgta
tcaagatggctagcgcatccctgaagagaggccatgacatgcgacttgtg
tgccggttcagggacgtcatgcaaaggaaaatgaagattagaa
agatcctcttgaagagctaaaattgcccttaaccactgaaccattttttt
ctagcattggtacttgccatacctaggacttatggaggttcaaggacaga
cttgtctgacttatgtcttttcgggtatggattgctagggagatggcatc
atagtgggcctgaatacaggagaaagagtttccaagattaaacagagact
agtgaaagacctcttctgtttgttgacacccaccccttactagacttcat
caaagtcctgacagatccttgctcctgtgaaggattgatgccccagtgta
gaagaatacaagggctagaagtgggtgggtatgtggcagagcacccttat
agaagcagggggaaaggggaaaccagaaaaagggataacatttgaaatgt
aaataaagaaaatatccaataaaagaaaagaagaaggaggaggaaggagg
aaggaagaaggaggagggaggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_78116971_78117452
seq2: B6Ng01-020I05.g_67_548 (reverse)

seq1  TCTCTCCTCCCTCCTCCTTCTTCCTTCCTCCTTCCTCCTCCTTCTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTCCCTCCTCCTTCTTCCTTCCTCCTTCCTCCTCCTTCTTCTTT  50

seq1  TCTTTTATTGGATATTTTCTTTATTTACATTTCAAATGTTATCCCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTGGATATTTTCTTTATTTACATTTCAAATGTTATCCCTTTTT  100

seq1  CTGGTTTCCCCTTTCCCCCTGCTTCTATAAGGGTGCTCTGCCACATACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTCCCCTTTCCCCCTGCTTCTATAAGGGTGCTCTGCCACATACCC  150

seq1  ACCCACTTCTAGCCCTTGTATTCTTCTACACTGGGGCATCAATCCTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTTCTAGCCCTTGTATTCTTCTACACTGGGGCATCAATCCTTCAC  200

seq1  AGGAGCAAGGATCTGTCAGGACTTTGATGAAGTCTAGTAAGGGGTGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAAGGATCTGTCAGGACTTTGATGAAGTCTAGTAAGGGGTGGGTG  250

seq1  TCAACAAACAGAAGAGGTCTTTCACTAGTCTCTGTTTAATCTTGGAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAACAGAAGAGGTCTTTCACTAGTCTCTGTTTAATCTTGGAAACT  300

seq1  CTTTCTCCTGTATTCAGGCCCACTATGATGCCATCTCCCTAGCAATCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCTGTATTCAGGCCCACTATGATGCCATCTCCCTAGCAATCCAT  350

seq1  ACCCGAAAAGACATAAGTCAGACAAGTCTGTCCTTGAACCTCCATAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGAAAAGACATAAGTCAGACAAGTCTGTCCTTGAACCTCCATAAGTC  400

seq1  CTAGGTATGGCAAGTACCAATGCTAGAAAAAAATGGTTCAGTGGTTAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTATGGCAAGTACCAATGCTAGAAAAAAATGGTTCAGTGGTTAAGG  450

seq1  GCAATTTTAGCTCTTCAAGAGGATCTGAATTC  482
      ||||||||||||||||||||||||||||||||
seq2  GCAATTTTAGCTCTTCAAGAGGATCTGAATTC  482