BAC Information

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BAC

Clone NameB6Ng01-020K12
Chromosome6 (Build37)10 (Build37)
Map Location 18,835,448 - 18,835,96831,787,136 - 31,787,707
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020K12.bB6Ng01-020K12.g
ACCDH853393DH853394
length955998
definitionDH853393|Mus musculus domesticus DNA, BAC clone: B6Ng01-020K12, 5' end.DH853394|Mus musculus domesticus DNA, BAC clone: B6Ng01-020K12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(31,787,136 - 31,787,707)
sequence
gaattctttgttcagttctgagccccattttttaattgggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgatggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctggtggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaattctagatcttacagcacaagccattgctgtt
ctagtcaggaattttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttcctta
atccacttagatttgaccttagtacaaggagataggtatggatcgattcg
cattcttctacatgataacaaccagttgtgccagcaccatttgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgccgaagatcaag
tgaccataggtgtgtggattcatttctggctcttcaattctattccattg
gtctacttgtctgtcagcataccagtaccatgcagtttttatcacaattg
ctatgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcagattgctctttctaattcgttgaagaattgagttggaaatt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatctttttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagttagagtcacgccagatattttatattattt
gtgac
gaattctgtccctagagagaaattatttgtaactgatggttgctgaaaag
tgaaaatcagttttccttgatctgtggttcctgagaggctatccaagcct
tagtaggacttagatccattgaaattaagtagacttaattggtttaaaac
caggaataaatgaagttggggaggaaaatcagtaacctgataggggaaaa
attacaggggagaaatgagggatgggtttcactgaaacacatactaatac
attatatatatatatatatatatatatatatatatatatatatatatata
tatatacatgcatatacatgatgaaagtctcaataaaatatttaaacaaa
aactggatgactacatggtatctagagcctcctccaaaactaacaacaat
gatgaaaaaaatggcaactctatgtccagaatcataccaaataccacttc
aggcagaccacaatcatagtcaacagtgcaattaatatagttcaacaaca
ggattcctgctaagaaacagtggatggctatgccatcttcatggtatggt
gttctttgtgataactttgtgtaatcaagagaaaacatcagacaaagctg
aactgagactggctcaataaaataattggcttttactgcttaaaaatgcc
agtattagtgaagccaaagaaagactgacaacctggcacagatctgagga
gactaggatttgtgagagacaaagtttgggactctaactgaatgcgggga
tagaaaaaaaaaacacttcagaagtgacattaagctcatcaattggggta
atcctatggggctgagatattgtacttttcaagagtgttctatattatat
aagagagcaaatgataggagatatgtatatggcatgtcgggaatctttac
tttttcctcaaattatgctgctactaaaaaagctttctggaagattactc
tcctcgaactctgtgcacattttattctacagcatgtgatgtatgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-020K12.b_42_564 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGAATCCACACACCTATGGTCACTTGATCTTCGGCAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||| ||||||| |||
seq2  GGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACCTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATTAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGG-AAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTA  298
       ||||| |||| |||||||  |||||||||||||| |||||||| || | 
seq2  CAGGGGAAAAAATTCCTGACTAGAACAGCAATGGCTTGTGCTGTAAGATC  300

seq1  GAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  348
       ||||| |||||||||||||| |||||||| ||||| |||||||||||||
seq2  TAGAATTGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAA  350

seq1  AAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATC  398
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGACACCGTCAATAAGACAAAAAGACCACCACCAGATTGGGAAAGGATC  400

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  448
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCATCATATATAAAGA  450

seq1  ACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGG  498
      |||||||||||||||||||||||||||||||||||| ||||| |||||||
seq2  ACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCAATTAAAAAATGGG  500

seq1  GCTCAGAACTGAACAAAGAATTC  521
      |||||||||||||||||||||||
seq2  GCTCAGAACTGAACAAAGAATTC  523

seq1: chr10_31787136_31787707
seq2: B6Ng01-020K12.g_496_1062

seq1  TCATACCAAATACCACTTCAGGCAGACCACAATCATAGTCAACAGTGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCAAATACCACTTCAGGCAGACCACAATCATAGTCAACAGTGCAA  50

seq1  TTAATATAGTTCAACAACAGGATTCCTGCTAAGAAACAGTGGATGGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAGTTCAACAACAGGATTCCTGCTAAGAAACAGTGGATGGCTAT  100

seq1  GCCATCTTCATGGTATGGTGTTCTTTGTGATAACTTTGTGTAATCAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTTCATGGTATGGTGTTCTTTGTGATAACTTTGTGTAATCAAGAG  150

seq1  AAAACATCAGACAAAGCTGAACTGAGACTGGCTCAATAAAATAATTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCAGACAAAGCTGAACTGAGACTGGCTCAATAAAATAATTGGCT  200

seq1  TTTACTGCTTAAAAATGCCAGTATTAGTGAAGCCAAAGAAAGACTGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGCTTAAAAATGCCAGTATTAGTGAAGCCAAAGAAAGACTGACAA  250

seq1  CCTGGCACAGATCTGAGGAGACTAGGATTTGTGAGAGACAAAGTTTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCACAGATCTGAGGAGACTAGGATTTGTGAGAGACAAAGTTTGGGA  300

seq1  CTCTAACTGAATGCGGGAATAGAAAAAAAAAACACTTCAGAAGTGACATT  350
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCTAACTGAATGCGGGGATAGAAAAAAAAAACACTTCAGAAGTGACATT  350

seq1  AAGCTCATCAATTGGGTTAATCCTATGGTGCTGAGATAATGTACCTTTCA  400
      |||||||||||||||| ||||||||||| ||||||||| ||||| |||||
seq2  AAGCTCATCAATTGGGGTAATCCTATGGGGCTGAGATATTGTACTTTTCA  400

seq1  AGAGTGTTCTATATTTATATAAGAGAGCAAATGATAGGAAGATAGGTATA  450
      ||||||||||||| |||||||||||||||||||||||| ||||| |||||
seq2  AGAGTGTTCTATA-TTATATAAGAGAGCAAATGATAGG-AGATATGTATA  448

seq1  TGGCATGTCGGGAATCTTTACTTTTTCCTCAAATTATGCTGCATCCTAGA  500
      |||||||||||||||||||||||||||||||||||||||||| | ||| |
seq2  TGGCATGTCGGGAATCTTTACTTTTTCCTCAAATTATGCTGC-TACTAAA  497

seq1  AAAGCTTTCTGGAAGATTACTCTTCTCTGAACTCTGTGCACACTTTATTT  550
      ||||||||||||||||||||||| ||| |||||||||||||| |||| ||
seq2  AAAGCTTTCTGGAAGATTACTCTCCTC-GAACTCTGTGCACATTTTA-TT  545

seq1  CTACAGCAATTGAGTTATGCTG  572
      ||||||||  |||  |||||||
seq2  CTACAGCATGTGATGTATGCTG  567