BAC Information

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BAC

Clone NameB6Ng01-021O14
Chromosome6 (Build37)
Map Location 37,104,707 - 37,245,625
singlet/doubletdoublet
Overlap geneDgki
Upstream gene9330158H04Rik, Chrm2, EG620863, LOC100039370, Ptn, LOC100039514, EG665024
Downstream geneCreb3l2, Akr1d1, LOC665046, Ybx1-ps2, LOC100039636, LOC665102, Trim24, Svopl, Atp6v0a4, LOC100039657, D630002J15Rik, D630045J12Rik, LOC665125, Zc3hav1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021O14.bB6Ng01-021O14.g
ACCDH854290DH854291
length1,128233
definitionDH854290|Mus musculus domesticus DNA, BAC clone: B6Ng01-021O14, 5' end.DH854291|Mus musculus domesticus DNA, BAC clone: B6Ng01-021O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,244,484 - 37,245,625)(37,104,707 - 37,104,939)
sequence
gaattccctatgtatactctgtagaacagactgatcccgaacgcacatag
atccacttgcttctgcctcctgagtgccggggttaaaggtgtgcgccacc
aagcccagtcctccctgttctttcttaagtgcttcatcctttgggctgag
gctccttgccttggcctcgatggctagtgccttcagaaaccctctactat
ttcataactggaaatgaatataaattcatgatcttcagcaaattgtttgg
ttttgcttctgggaacaaaaccacctccaagacacctgttatctctacga
agacacccatgttagaagtttatgcacttttaaaataatttctgcaggtg
ctgtgtaggtgcatggaggtttggtgcaaagctgctgcctttcctctttg
ggcaacacacagcaagagagaaagtataagcttgcttgtaaggaggcctt
ggcaggagccattatctatgaatttctattcgtggacttaacttgcttca
tttgaggcaagtcatagtggtcacacttgacctttctcacggaaagtttc
tagtacagtatagaagcaaaggccggtacaatggatcttcttatagtaga
caactgctagaaagggggtctcttattccttaactttgatgacaacaaca
aagtgcagttgtcccttagtggctgtgggggactggcttcaggattactg
tgcagataagccccttagataaaaccgcatcacattcgcatataacctgt
ttgcaccttttgagtcatctccatttcttaatacatgttttaataaaaca
taaaacataaacaaagtttaatgcacttcaagagttgtcagacaccatta
atgataacatggcatgctcggtccagaaatagttttatttttttccctaa
tgtttcatccatggttagtcgagtctatagtggcaggacccgacgacaca
gacgtctcactgtggttccgagtcgtgttctgttcacacaacaagactgt
ttagtaagggacagctgggagttggaggttaacagagtagcatggctagg
ttcttctgctttgggagttatagatacaggacctgtgctccggaatttcg
catgtactgttcttctttaaagccagta
aaaggagtttttgattattttaaatgtacatcaacatcttcaaggatgta
attactactgggggaaaaaaggtgggacttagtttcctaagttcagtcag
aaagtcactgctgtattgaaccatcaaaacaatatacctgtagatatgga
ctttggtactctgtggtgattccttctaaaacaattcagtcctcagcaca
agaaggagtaggaaaattgggggggggggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_37244484_37245625
seq2: B6Ng01-021O14.b_43_1169 (reverse)

seq1  ACTGGCTTTGTAAAGAAGAACGTTACATGCGGATATTCCGAAGACAATGT  50
      ||||||||  |||||||||||  ||||||| || |||||| ||   | | 
seq2  ACTGGCTT--TAAAGAAGAACAGTACATGC-GAAATTCCGGAGCACAGG-  46

seq1  TTCCTGTATACTACTAACT-CCAGAGCAAGGAAGAGACATGACCATGCTA  99
       |||||||| ||| ||||| ||| ||||  ||||| || |  ||||||||
seq2  -TCCTGTAT-CTA-TAACTCCCAAAGCA--GAAGA-ACCTAGCCATGCTA  90

seq1  CTCTGTTTAGCTTCCAACTCCCAGCTGTCCCTTACTAATACAGTCTTGTT  149
      ||||| ||| | |||||||||||||||||||||||||| ||||||||| |
seq2  CTCTG-TTAACCTCCAACTCCCAGCTGTCCCTTACTAA-ACAGTCTTG-T  137

seq1  TGTGTGAACAGAACACGACTCGGGAACACAGTGAGACGTCTGTGTCGTCG  199
      ||||||||||||||||||||||| | ||||||||||||||||||||||||
seq2  TGTGTGAACAGAACACGACTCGGAACCACAGTGAGACGTCTGTGTCGTCG  187

seq1  GGTCCTGCCACTATAGACTCGACTAACCATGGATTGAAAACATTAGGGAA  249
      ||||||||||||||||||||||||||||||||||   |||||||||||||
seq2  GGTCCTGCCACTATAGACTCGACTAACCATGGAT--GAAACATTAGGGAA  235

seq1  AAAAATAAAACTATTTCTGGACCGAGCATGCCATGTTATCATTAATGGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAACTATTTCTGGACCGAGCATGCCATGTTATCATTAATGGTG  285

seq1  TCTGACAACTCTTTGAAGTGCATTAAACTTTGTTTATGTTTTATGTTTTA  349
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAACTC-TTGAAGTGCATTAAACTTTGTTTATGTTTTATGTTTTA  334

seq1  TTAAAACATGTATTAAGAAATGGAGATGACTCAAAAGGTGCAAACAGGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATGTATTAAGAAATGGAGATGACTCAAAAGGTGCAAACAGGTT  384

seq1  ATATGCGAATGTGATGCGGTTTTATCTAAGGGGCTTATCTGCACAGTAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCGAATGTGATGCGGTTTTATCTAAGGGGCTTATCTGCACAGTAAT  434

seq1  CCTGAAGCCAGTCCCCCACAGCCACTAAGGGACAACTGCACTTTGTTGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGCCAGTCCCCCACAGCCACTAAGGGACAACTGCACTTTGTTGTT  484

seq1  GTCATCAAAGTTAAGGAATAAGAGACCCCCTTTCTAGCAGTTGTCTACTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAAAGTTAAGGAATAAGAGACCCCCTTTCTAGCAGTTGTCTACTA  534

seq1  TAAGAAGATCCATTGTACCGGCCTTTGCTTCTATACTGTACTAGAAACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGATCCATTGTACCGGCCTTTGCTTCTATACTGTACTAGAAACTT  584

seq1  TCCGTGAGAAAGGTCAAGTGTGACCACTATGACTTGCCTCAAATGAAGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGAGAAAGGTCAAGTGTGACCACTATGACTTGCCTCAAATGAAGCA  634

seq1  AGTTAAGTCCACGAATAGAAATTCATAGATAATGGCTCCTGCCAAGGCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTCCACGAATAGAAATTCATAGATAATGGCTCCTGCCAAGGCCT  684

seq1  CCTTACAAGCAAGCTTATACTTTCTCTCTTGCTGTGTGTTGCCCAAAGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAAGCAAGCTTATACTTTCTCTCTTGCTGTGTGTTGCCCAAAGAG  734

seq1  GAAAGGCAGCAGCTTTGCACCAAACCTCCATGCACCTACACAGCACCTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCAGCAGCTTTGCACCAAACCTCCATGCACCTACACAGCACCTGC  784

seq1  AGAAATTATTTTAAAAGTGCATAAACTTCTAACATGGGTGTCTTCGTAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTATTTTAAAAGTGCATAAACTTCTAACATGGGTGTCTTCGTAGA  834

seq1  GATAACAGGTGTCTTGGAGGTGGTTTTGTTCCCAGAAGCAAAACCAAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAGGTGTCTTGGAGGTGGTTTTGTTCCCAGAAGCAAAACCAAACA  884

seq1  ATTTGCTGAAGATCATGAATTTATATTCATTTCCAGTTATGAAATAGTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGAAGATCATGAATTTATATTCATTTCCAGTTATGAAATAGTAG  934

seq1  AGGGTTTCTGAAGGCACTAGCCATCGAGGCCAAGGCAAGGAGCCTCAGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTGAAGGCACTAGCCATCGAGGCCAAGGCAAGGAGCCTCAGCC  984

seq1  CAAAGGATGAAGCACTTAAGAAAGAACAGGGAGGACTGGGCTTGGTGGCG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATGAAGCACTTAAGAAAGAACAGGGAGGACTGGGCTTGGTGGCG  1034

seq1  CACACCTTTAACCCCGGCACTCAGGAGGCAGAAGCAAGTGGATCTATGTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTTAACCCCGGCACTCAGGAGGCAGAAGCAAGTGGATCTATGTG  1084

seq1  CGTTCGGGATCAGTCTGTTCTACAGAGTATACATAGGGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCGGGATCAGTCTGTTCTACAGAGTATACATAGGGAATTC  1127

seq1: chr6_37104707_37104939
seq2: B6Ng01-021O14.g_75_307

seq1  AAAGGAGTTTTTGATTATTTTAAATGTACATCAACATCTTCAAGGATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGTTTTTGATTATTTTAAATGTACATCAACATCTTCAAGGATGTA  50

seq1  ATTACTACTGGGGGAAAAAAGGTGGGACTTAGTTTCCTAAGTTCAGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTACTGGGGGAAAAAAGGTGGGACTTAGTTTCCTAAGTTCAGTCAG  100

seq1  AAAGTCACTGCTGTATTGAACCATCAAAACAATATACCTGTAGATATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACTGCTGTATTGAACCATCAAAACAATATACCTGTAGATATGGA  150

seq1  CTTTGGTACTCTGTGGTGATTCCTTCTAAAACAATTCAGTCCTCAGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTACTCTGTGGTGATTCCTTCTAAAACAATTCAGTCCTCAGCACA  200

seq1  AGAAGGAGTAGGAAAATTGGGGGGGGGGGGGAA  233
      |||||||||||||||||||||||||||||||||
seq2  AGAAGGAGTAGGAAAATTGGGGGGGGGGGGGAA  233