BAC Information

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BAC

Clone NameB6Ng01-022E12
Chromosome6 (Build37)
Map Location 75,473,955 - 75,571,744
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022E12.bB6Ng01-022E12.g
ACCDH854545DH854546
length7211,073
definitionDH854545|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E12, 5' end.DH854546|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,571,024 - 75,571,744)(75,473,955 - 75,475,043)
sequence
gaattcctgggaaatccttgtagcagtaggctgcaggcatgttttgtttt
gttttgttttgttttgttttgttttgttttgttttgttttgttttgtttt
gttttgttttgtcgagacagggtttctctgtgtagccctggatgtcctgg
aactcactctgtagaccaggctggcctcgaactcagaaatccgcctgcct
ctgcctcccaagtgctgggataaaaggcatgggccaccacgcccggctta
atttagcaagggaagacttagtgagctagcttcagtgcagtttttttcaa
atggtgtttggggctggacatgggggttggcaagactgccgaggctggca
catagctggctttagaatgggtttcactttttaaaaactataagctacgg
tatacacatttatatcccttgtcttgtcaactgataaagtgataaagaat
aatctgccctgaggaggcatgggaatgatgtcgataccctttcagcccta
ctcctcctagccaattggaaaacatgtcttctgatcttgagagtggttga
gatggccctggtctttgctgtcaacaggattcagtagaacagacactgca
acttgtgtgggcagcacagtagagcttccttttgatggaaggggatcagg
ggagccatcccaatatgtgtaggagaccttgcactgtcaccactcatccc
cccatgatgagaaagggcaca
gaattctagatgagagatagtcattgccatcatttgtgtacccacagaac
gttcattagcatctgctaggttccaaagccaaggacatacagatattcat
gactaaaagcccaaagaaggaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagagcacaagaagcactccgggcatggtggtgca
agcctttaatcccagcactcaggaggtagagcaggtggatttctgagttt
gaggccagcctggtctacaaagtgagttccaggacagccagggctacaca
gagaaaccctgtcttgaaaaaccaaaataaataaataaataaataaataa
ataaataaataaataaataaaggaatgtaggtaggaaggaagaagagaaa
agaaaaagaaaaatatatccacttggtaaatggacttgaagaaatcaggg
gagtacaggagttattgggagacaactattatggaagggagactaagcag
acaatactatctgaatctctcaacttttctaagaacaaaagaacaaatat
tatcagaaaaaacgtaaaaaaaataggacagcatgaaaaataggatatat
ggatatgctttttttttaaactattccatatcactagaatggctaagatc
taaaaaaaaaatgtactatatgtagtatatatgccaatggcaataatatt
attgtataaaataaagaagaatctatgatgagagaaacaatctgatttgg
aaaaaagatagagtgtaacaatataattaacaaatagtttatcaccatag
cttttgcattgcataaatctcatctgatttattccacgtgattttttaat
aaccagctggatttatgttttcactgatatttaaatgtttgctattgtat
atagatacactgatcctctattagtatgcaatttcaggagaaagaaatgg
caagtagggacaatattattattaaataagtgttgcacatggggaaaaat
tcctgattagaacagcatggcttgtgctttagatcgagaattgacattgg
actcataaactgctagcttctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75571024_75571744
seq2: B6Ng01-022E12.b_42_763 (reverse)

seq1  TGTGCCCTTTCTACATCAT-GGGGGATGAGTGGTGACAGTGCTAGGTCTC  49
      |||||||||||| |||||| |||||||||||||||||||||| |||||||
seq2  TGTGCCCTTTCT-CATCATGGGGGGATGAGTGGTGACAGTGCAAGGTCTC  49

seq1  CTACACATATTGGGATGGCTCCCCTGATCCCCTTCCATC-AAAGGAAGCT  98
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTACACATATTGGGATGGCTCCCCTGATCCCCTTCCATCAAAAGGAAGCT  99

seq1  CTACTGTGCTGCCCACACAAGTTGCAGTGTCTGTTCTACTGAATCCTGTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTGCTGCCCACACAAGTTGCAGTGTCTGTTCTACTGAATCCTGTT  149

seq1  GACAGCAAAGACCAGGGCCATCTCAACCACTCTCAAGATCAGAAGACATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAAGACCAGGGCCATCTCAACCACTCTCAAGATCAGAAGACATG  199

seq1  TTTTCCAATTGGCTAGGAGGAGTAGGGCTGAAAGGGTATCGACATCATTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAATTGGCTAGGAGGAGTAGGGCTGAAAGGGTATCGACATCATTC  249

seq1  CCATGCCTCCTCAGGGCAGATTATTCTTTATCACTTTATCAGTTGACAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCTCCTCAGGGCAGATTATTCTTTATCACTTTATCAGTTGACAAG  299

seq1  ACAAGGGATATAAATGTGTATACCGTAGCTTATAGTTTTTAAAAAGTGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGATATAAATGTGTATACCGTAGCTTATAGTTTTTAAAAAGTGAA  349

seq1  ACCCATTCTAAAGCCAGCTATGTGCCAGCCTCGGCAGTCTTGCCAACCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCTAAAGCCAGCTATGTGCCAGCCTCGGCAGTCTTGCCAACCCC  399

seq1  CATGTCCAGCCCCAAACACCATTTGAAAAAAACTGCACTGAAGCTAGCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCAGCCCCAAACACCATTTGAAAAAAACTGCACTGAAGCTAGCTC  449

seq1  ACTAAGTCTTCCCTTGCTAAATTAAGCCGGGCGTGGTGGCCCATGCCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTCTTCCCTTGCTAAATTAAGCCGGGCGTGGTGGCCCATGCCTTT  499

seq1  TATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCC  549

seq1  AGCCTGGTCTACAGAGTGAGTTCCAGGACATCCAGGGCTACACAGAGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAGAGTGAGTTCCAGGACATCCAGGGCTACACAGAGAAA  599

seq1  CCCTGTCTCGACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCGACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAA  649

seq1  ACAAAACAAAACAAAACAAAACAAAACAAAACATGCCTGCAGCCTACTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAAACAAAACAAAACATGCCTGCAGCCTACTGC  699

seq1  TACAAGGATTTCCCAGGAATTCC  721
      |||||||||||||||||||||||
seq2  TACAAGGATTTCCCAGGAATTCC  722

seq1: chr6_75473955_75475043
seq2: B6Ng01-022E12.g_68_1140

seq1  GAATTCTAGATGAGAGATAGTCATTGCCATCATTTGTGTACCCACAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATGAGAGATAGTCATTGCCATCATTTGTGTACCCACAGAAC  50

seq1  GTTCATTAGCATCTGCTAGGTTCCAAAGCCAAGGACATACAGATATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTAGCATCTGCTAGGTTCCAAAGCCAAGGACATACAGATATTCAT  100

seq1  GACTAAAAGCCCAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAAAGCCCAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  150

seq1  AGAAAGAAAGAAAGAAAGAGCACAAGAAGCACTCCGGGCATGGTGGTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAGCACAAGAAGCACTCCGGGCATGGTGGTGCA  200

seq1  AGCCTTTAATCCCAGCACTCAGGAGGTAGAGCAGGTGGATTTCTGAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTAATCCCAGCACTCAGGAGGTAGAGCAGGTGGATTTCTGAGTTT  250

seq1  GAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACA  300

seq1  GAGAAACCCTGTCTTGAAAAACCAAAATAAATAAATAAATAAATAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTGTCTTGAAAAACCAAAATAAATAAATAAATAAATAAATAA  350

seq1  ATAAATAAATAAATAAATAAAGGAATGTAGGTAGGAAGGAAGAAGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATAAAGGAATGTAGGTAGGAAGGAAGAAGAGAAA  400

seq1  AGAAAAAGAAAAATATATCCACTTGGTAAATGGACTTGAAGAAATCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGAAAAATATATCCACTTGGTAAATGGACTTGAAGAAATCAGGG  450

seq1  GAGTACAGGAGTTATTGGGAGACAACTATTATGGAAGGGAGACTAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGGAGTTATTGGGAGACAACTATTATGGAAGGGAGACTAAGCAG  500

seq1  ACAATACTATCTGAATCTCTCAACTTTTCTAAGAACAAAAGAACAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACTATCTGAATCTCTCAACTTTTCTAAGAACAAAAGAACAAATAT  550

seq1  TATCAGAAAAAACGTAAAAAAAATAGGACAGCATGAAAAATAGGATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAAAAAACGTAAAAAAAATAGGACAGCATGAAAAATAGGATATAT  600

seq1  GGATATGCTTTTTTTTTAAACTATTCCATATCACTAGAATGGCTAAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGCTTTTTTTTTAAACTATTCCATATCACTAGAATGGCTAAGATC  650

seq1  TAAAAAAAAAATGTACTATATGTAGTATATATGCCAATGGCAATAATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAATGTACTATATGTAGTATATATGCCAATGGCAATAATATT  700

seq1  ATTGTATAAAATAAAGAAGAATCTATGATGAGAGAAACAATCTGATTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATAAAATAAAGAAGAATCTATGATGAGAGAAACAATCTGATTTGG  750

seq1  AAAAAAGATAAGAGTGTAACAATATAATTAACAAATAGTTTATCACCATA  800
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAT-AGAGTGTAACAATATAATTAACAAATAGTTTATCACCATA  799

seq1  GCTTTTGCATTGCATAAATCTCATCTGATTTATTCCACGTGATATTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCTTTTGCATTGCATAAATCTCATCTGATTTATTCCACGTGATTTTTTAA  849

seq1  TAACCAGCTGGAATTATGTTTTCACTGATATTTAAATGTTTGCTAATGTA  900
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  TAACCAGCTGGATTTATGTTTTCACTGATATTTAAATGTTTGCTATTGTA  899

seq1  TATAGAATACACTGATCCTCTATTAGTATGCAATTTCAAGGAGAAAGAAA  950
      ||||| ||||||||||||||||||||||||||||||| ||||||||| ||
seq2  TATAG-ATACACTGATCCTCTATTAGTATGCAATTTC-AGGAGAAAG-AA  946

seq1  ATGGCAAGTAGGGACAAATATTAATTAATAAAATAAAGTGTGCCACAGGG  1000
      ||||||||||||||| |||||| |||| ||||   ||||||  |||| ||
seq2  ATGGCAAGTAGGGAC-AATATT-ATTATTAAA--TAAGTGTTGCACATGG  992

seq1  GGAAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGA  1050
      || |||||||||||| ||||||||| |||||||||||| | |||||||||
seq2  GG-AAAAATTCCTGATTAGAACAGC-ATGGCTTGTGCT-TTAGATCGAGA  1039

seq1  ATTGACAAATGGGACCTCATAAAACTGCAAAGCTTCTGT  1089
      ||||||  || ||| ||||| |||||||  |||||||||
seq2  ATTGAC--ATTGGA-CTCAT-AAACTGC-TAGCTTCTGT  1073