BAC Information

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BAC

Clone NameB6Ng01-022H12
Chromosome6 (Build37)
Map Location 62,142,026 - 62,143,143
singlet/doubletsinglet
Overlap geneC130092O11Rik
Upstream geneLOC100041764, LOC100042694
Downstream geneGA_x5J8B7W6GG0-4757855-4757501, LOC667099
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022H12.bB6Ng01-022H12.g
ACCDH854673DH854674
length1,1481,108
definitionDH854673|Mus musculus domesticus DNA, BAC clone: B6Ng01-022H12, 5' end.DH854674|Mus musculus domesticus DNA, BAC clone: B6Ng01-022H12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggtttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaatttgagttggaatt
ttaatggggattgcattgaatctgtagattgcttttggcaagatagccat
ttttacaatgttggtcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttcttcgggacttgaagtttttatcat
accgatcttcacttccttcgttagagtcacgccgagatatttttattatt
gtggctattgagaagggtgttgtttccctatttcttctaacctggtttat
cctttgtgagagaaggccatggacttgtttgagttattttaattcgagct
acttccacgaagctgttaccaggttatgaggtctccgggggaatgtagga
acctatatacctactatatccttgccacaaggagtattggagctgctg
gaattcacttgttttttttcttccctggacactcaagtgttatatttgaa
ttcaagtgttatatttaaattgttcaaatttgttgattttcgttgtttct
tcctggggcctgtctttactaagagcttgttaggagtctcatgcttgagg
cacagaagtatggagactctttagattgggtctcccatgctttcacatgt
agtatctctagtgacggttcctcccctgcagtttctacaaagggttctta
ctgtcttaggcctgtttctgctgtaggtaaatagaactttctgcatcgat
ttctctatcgctgacttttatggcaaacgaagtaatataaccttagccct
ctgacctgagttcattttgttctcttgtaatgatatgagtgatgacttcc
aaggtatatatacagtgaatattgaaaaactggacatcaggaatcaaata
tttgaaatacgcatatatgagagcatttgcattgactttgtctctcatgt
gaaccttcatgtgtgcattggatgagtcagcttttctgtagtagatgtga
tttgaaaactaaatctgtattggatatatgaagtttgtacttgttttaaa
tgttcatactcttttccactgaactacaaatgtaatggctattatgtcat
atacctagacagtgattgtattattctgaaaaccttttcttgcaaggact
aaattaaattattttattgcctttttataaattttaaagtgatacttaag
acggctatgtatcactttagtttgctatttttttcctggggtgagtgaga
agaaatcatagctatagatatcagtaggaagccactggcatcaaacaaaa
cactatgcaactggagtccatactcagttccattatagaaagaattacat
gctatagtttgaacccttttgcagtttaaaatttactgtgttagggaata
aagacatgtgtccatttctcctttcagcactgggaccctcatctggccag
atgtgtgcagccctgtgtatgctggcacagcctctattgttcatataaca
taacatgtcatgctgcatttagagacctggtttcttagggttctcacctt
taggacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_62142026_62143143
seq2: B6Ng01-022H12.g_67_1174

seq1  GAATTCACTTGTTTTTTTTCTTCCCTGGACACTCAAGTGTTATATTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTTTTTTTTCTTCCCTGGACACTCAAGTGTTATATTTGAA  50

seq1  TTCAAGTGTTATATTTAAATTGTTCAAATTTGTTGATTTTCGTTGTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGTTATATTTAAATTGTTCAAATTTGTTGATTTTCGTTGTTTCT  100

seq1  TCCTGGGGCCTGTCTTTACTAAGAGCTTGTTAGGAGTCTCATGCTTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGCCTGTCTTTACTAAGAGCTTGTTAGGAGTCTCATGCTTGAGG  150

seq1  CACAGAAGTATGGAGACTCTTTAGATTGGGTCTCCCATGCTTTCACATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGTATGGAGACTCTTTAGATTGGGTCTCCCATGCTTTCACATGT  200

seq1  AGTATCTCTAGTGACGGTTCCTCCCCTGCAGTTTCTACAAAGGGTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTCTAGTGACGGTTCCTCCCCTGCAGTTTCTACAAAGGGTTCTTA  250

seq1  CTGTCTTAGGCCTGTTTCTGCTGTAGGTAAATAGAACTTTCTGCATCGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAGGCCTGTTTCTGCTGTAGGTAAATAGAACTTTCTGCATCGAT  300

seq1  TTCTCTATCGCTGACTTTTATGGCAAACGAAGTAATATAACCTTAGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATCGCTGACTTTTATGGCAAACGAAGTAATATAACCTTAGCCCT  350

seq1  CTGACCTGAGTTCATTTTGTTCTCTTGTAATGATATGAGTGATGACTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGAGTTCATTTTGTTCTCTTGTAATGATATGAGTGATGACTTCC  400

seq1  AAGGTATATATACAGTGAATATTGAAAAACTGGACATCAGGAATCAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATATATACAGTGAATATTGAAAAACTGGACATCAGGAATCAAATA  450

seq1  TTTGAAATACGCATATATGAGAGCATTTGCATTGACTTTGTCTCTCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATACGCATATATGAGAGCATTTGCATTGACTTTGTCTCTCATGT  500

seq1  GAACCTTCATGTGTGCATTGGATGAGTCAGCTTTTCTGTAGTAGATGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTCATGTGTGCATTGGATGAGTCAGCTTTTCTGTAGTAGATGTGA  550

seq1  TTTGAAAACTAAATCTGTATTGGATATATGAAGTTTGTACTTGTTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAACTAAATCTGTATTGGATATATGAAGTTTGTACTTGTTTTAAA  600

seq1  TGTTCATACTCTTTTCCACTGAACTACAAATGTAATGGCTATTATGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATACTCTTTTCCACTGAACTACAAATGTAATGGCTATTATGTCAT  650

seq1  ATACCTAGACAGTGATTGTATTATTCTGAAAACCTTTTCTTGCAAGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGACAGTGATTGTATTATTCTGAAAACCTTTTCTTGCAAGGACT  700

seq1  AAATTAAATTATTTTATTGCCTTTTTATAAATTTTAAAGTGATACTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAATTATTTTATTGCCTTTTTATAAATTTTAAAGTGATACTTAAG  750

seq1  ACGGCTATGTATCACTTTAGTTTGCTATTTTTTTCCTGGGGTGAGTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTATGTATCACTTTAGTTTGCTATTTTTTTCCTGGGGTGAGTGAGA  800

seq1  AGAAATCATAGCTATAGATATCAGTAGGAAGCCACTGGCATCAAACAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCATAGCTATAGATATCAGTAGGAAGCCACTGGCATCAAACAAAA  850

seq1  CACTATGCAACTGGAGTCCATACTCAGTTCCATTATAGAAAGAATTACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGCAACTGGAGTCCATACTCAGTTCCATTATAGAAAGAATTACAT  900

seq1  GCTATAGTTTGAACCCTTTTGCAGTTTAAAATTTAACTGTGTTAGGG-AT  949
      |||||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  GCTATAGTTTGAACCCTTTTGCAGTTTAAAATTT-ACTGTGTTAGGGAAT  949

seq1  ATAGACATGTGTCCATTTCTCCTTTCAGCACTGGGACCCTCATCTGGCCC  999
      | ||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGACATGTGTCCATTTCTCCTTTCAGCACTGGGACCCTCATCTGG-CC  998

seq1  AGATGTGTGCAGGCCCTGTGTATGCTGGCACAGTCTCTATTTGTTCATAT  1049
      ||||||||||| ||||||||||||||||||||| ||||| ||||||||||
seq2  AGATGTGTGCA-GCCCTGTGTATGCTGGCACAGCCTCTA-TTGTTCATAT  1046

seq1  ATACCATACATTGTTCATGCTGCATTTAGTAGACCTTGTTTTCTTAGTGT  1099
      | ||   ||||   ||||||||||||||| ||||| || |||||||| ||
seq2  A-ACATAACAT--GTCATGCTGCATTTAG-AGACC-TGGTTTCTTAGGGT  1091

seq1  TCTTCATCCTTTAGAACCT  1118
      || ||| ||||||| ||||
seq2  TC-TCA-CCTTTAGGACCT  1108