BAC Information

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BAC

Clone NameB6Ng01-022O02
Chromosome6 (Build37)
Map Location 19,610,458 - 19,796,299
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022O02.bB6Ng01-022O02.g
ACCDH854961DH854962
length503413
definitionDH854961|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O02, 5' end.DH854962|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,795,791 - 19,796,299)(19,610,458 - 19,610,876)
sequence
tatgctttcatgttaatgtgaaccaccctgataaacatcaattatattga
tcagcaacacagattgcagagaaatgtgatttacagggaaacataggtct
gtggatggccatattggtgtgtgaaaatactcttgatatcctaagatgaa
atataaattaaaaactttcctaaagtaatagcatgctaaaattgttacat
tacagacaggtgttattttccaattggtggctatttcacagaagattgtt
gactaatgagtatatacatttattttagatttaacactcatttttacttt
taaataaaaaaacagtatcagtattacctatataaactataatcatataa
gaaaaataaaatataaattatgaatcataaagtaataatgttactttcta
ccctctaataaaaatggaattaacaatatgtcatatgtcatgaagaagga
gcaggaggaggaggagaaggagaagagaggcagagggagaggcagaggca
gag
caccttacaccagtcaaaatagctaagatcaaaatctcaggtgacaacac
aaattggtacggatgtggagaaagggaagcatgcttccattgctggttgg
attacaaactggtacaatcactctgaaaatcaatctgtgaattactcaga
aaactggaaatagatctacctgaagacccaggaatatcattcttgggaat
atacaaaaaaaaaaaaaaaaaaaaagtgccacgatgctacaagggcatga
atttcactatgttcatagtggccttgtttgtaacaactacaagctggaat
caagcaggcaggaaaaaagaggaccaaggaggattcctgtcaaggtctga
gtttattaggccaggttataagcacacagtgaggggaaatagggagaggc
tggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19795791_19796299
seq2: B6Ng01-022O02.b_46_554 (reverse)

seq1  CTCTGCCTCTGCCTCTCCCTCTGCCTCTCTTCTCCTTCTCCTCCTCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCTGCCTCTCCCTCTGCCTCTCTTCTCCTTCTCCTCCTCCTCC  50

seq1  TGCTCCTTCTTCATGACATATGACATATTGTTAATTCCATTTTTATTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTCTTCATGACATATGACATATTGTTAATTCCATTTTTATTAGA  100

seq1  GGGTAGAAAGTAACATTATTACTTTATGATTCATAATTTATATTTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGAAAGTAACATTATTACTTTATGATTCATAATTTATATTTTATTT  150

seq1  TTCTTATATGATTATAGTTTATATAGGTAATACTGATACTGTTTTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATATGATTATAGTTTATATAGGTAATACTGATACTGTTTTTTTAT  200

seq1  TTAAAAGTAAAAATGAGTGTTAAATCTAAAATAAATGTATATACTCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTAAAAATGAGTGTTAAATCTAAAATAAATGTATATACTCATTA  250

seq1  GTCAACAATCTTCTGTGAAATAGCCACCAATTGGAAAATAACACCTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAATCTTCTGTGAAATAGCCACCAATTGGAAAATAACACCTGTCT  300

seq1  GTAATGTAACAATTTTAGCATGCTATTACTTTAGGAAAGTTTTTAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTAACAATTTTAGCATGCTATTACTTTAGGAAAGTTTTTAATTTA  350

seq1  TATTTCATCTTAGGATATCAAGAGTATTTTCACACACCAATATGGCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATCTTAGGATATCAAGAGTATTTTCACACACCAATATGGCCATC  400

seq1  CACAGACCTATGTTTCCCTGTAAATCACATTTCTCTGCAATCTGTGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACCTATGTTTCCCTGTAAATCACATTTCTCTGCAATCTGTGTTGC  450

seq1  TGATCAATATAATTGATGTTTATCAGGGTGGTTCACATTAACATGAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAATATAATTGATGTTTATCAGGGTGGTTCACATTAACATGAAAGC  500

seq1  ATAGAATTC  509
      |||||||||
seq2  ATAGAATTC  509

seq1: chr6_19610458_19610876
seq2: B6Ng01-022O02.g_66_484

seq1  GAATTCCACCTTACACCAGTCAAAATAGCTAAGATCAAAATCTCAGGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTACACCAGTCAAAATAGCTAAGATCAAAATCTCAGGTGA  50

seq1  CAACACAAATTGGTACGGATGTGGAGAAAGGGAAGCATGCTTCCATTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAAATTGGTACGGATGTGGAGAAAGGGAAGCATGCTTCCATTGCT  100

seq1  GGTTGGATTACAAACTGGTACAATCACTCTGAAAATCAATCTGTGAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGATTACAAACTGGTACAATCACTCTGAAAATCAATCTGTGAATTA  150

seq1  CTCAGAAAACTGGAAATAGATCTACCTGAAGACCCAGGAATATCATTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAAACTGGAAATAGATCTACCTGAAGACCCAGGAATATCATTCTT  200

seq1  GGGAATATACAAAAAAAAAAAAAAAAAAAAAGTGCCACGATGCTACAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATACAAAAAAAAAAAAAAAAAAAAAGTGCCACGATGCTACAAGG  250

seq1  GCATGAATTTCACTATGTTCATAGTGGCCTTGTTTGTAACAACTACAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAATTTCACTATGTTCATAGTGGCCTTGTTTGTAACAACTACAAGC  300

seq1  TGGAATCAAGCAGGCAGGAAAAAAGAGGACCAAGGAGGATTCCTGTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCAAGCAGGCAGGAAAAAAGAGGACCAAGGAGGATTCCTGTCAAG  350

seq1  GTCTGAGTTTATTAGGCCAGGTTATAAGCACACAGTGAGGGGAAATAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGTTTATTAGGCCAGGTTATAAGCACACAGTGAGGGGAAATAGGG  400

seq1  AGAGGCTGGGGGGGGGGGA  419
      |||||||||||||||||||
seq2  AGAGGCTGGGGGGGGGGGA  419