BAC Information

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BAC

Clone NameB6Ng01-025E06
Chromosome6 (Build37)
Map Location 131,794,572 - 131,944,471
singlet/doubletdoublet
Overlap genenone
Upstream geneEG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
Downstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025E06.bB6Ng01-025E06.g
ACCDH856665DH856666
length9421,017
definitionDH856665|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E06, 5' end.DH856666|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,943,534 - 131,944,471)(131,794,572 - 131,795,143)
sequence
gaattctcaaagaaatattaaaaaaatataaattgtccatattcaatagc
ccaggtaatggtattgaatttccttttttttattccaatgtcaatagagt
tgacaaggatttataatactctgtgttggtgaagtatattgaagagtaga
ggtgttgtgtaaatgtggctatatgtatcaataaagatgaaaagcttcaa
tgaacagtgagcatagtatgtatgctctttgtgtgtggtcattaactatt
gtgtgatgaaattggtcagagtccatctgaagcacgtaaagcattatgat
gttacatcaacattagtaacagcagattgccccttagtctgatcaggtcc
ccaaaccctttcccaatcttcccaattctaagcataatgccttgtagaga
gagttgatattgcctaaaatggtttggttcatactaaaatcctttaggtt
gttaaatgtgtcttgtaaaactccaaagaaatttcaactgtaggagaata
tgaatatatattttccataattaacatgagtttaatagtatatgagattt
atggaattcttttcttcttgaaaatgttctgtaaggttgtgtgggtggtc
tttcttcctagaaataattttattcactgtcactctacatgaataagctg
aattaattttttaggctggtctatactgtttttaaatgggtatttttttc
tttttcattcatgcactgttttatcaccaacatttatgctgctctctgat
agagtttttaatacaggggattaaatctcaataattactcttgttatgtg
tcatttttcctagtgaaaatattttactgatattatcaattttcaattta
atttaattgctctctatatatcccattgattccgggacaattcttgcatt
tacccctctaatgaaattgtggtgtaatgtgtccaactttat
gaattcctcttggatatcttgctgttgccctgtatgatggagatactgca
gctttggatttgtaggattgcccccttcatatactccagcagttcataga
tgctttcgatgtttaggtaggcaaactcaaagccctgaatctgggcctgc
ctgttattctccatccacaccactagagtgagatccccattactggtctg
gctagattacccaatgttgtagctgtcaagaggcaatacaagttatttac
tctaatgccagtaggaacatctctattgtgttgcccaggtgaggtacacg
actgttctctagaatgcagcccagactgaggattacagtcagatctcctg
gctgctgtaggtggcaaagggcaagagggaaggaattgcaactctattgt
ctatgccactgcacttcagacatgtggtagggccagctgtctcccactca
cgtcctcaggactggctcaactgcacaattccaccactgtcttatccatt
gttctgcctaaggaagatggatgtccttttcttcattgttctgcagctgg
taaggggacagagacagttctcctggtctcagacctttgggccaactttc
ccatgattaccagttgagaagtagggctggttccacacagccctcagaca
tcaatatatattcaggtgggactccagatcagcaagataacccttctgct
acagggttcagacacagacatgattcttggcaggagcatgagacaggacc
tcatcattgccttaagatgcattgcaggatatttatgtcaggctgctctt
tcattttccccaagtctccagcactgtctctcttctgtgcatacattctt
ctgatctccttatctttccattctccaacacttttcttgcttatagcagt
gtcacctggggcctctgggtggtctggaaactcaggaatggctatgaccc
gacttgtgtctattcctgggcaagtggttttcttttggtattttttactg
tctatggtttcttggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131943534_131944471
seq2: B6Ng01-025E06.b_33_974 (reverse)

seq1  ATAAAGTTGGACACATAACACCAACAATTTCATTAGAGGGCTAAATGCAA  50
      |||||||||||||||| ||||| ||||||||||||||||| |||||||||
seq2  ATAAAGTTGGACACATTACACC-ACAATTTCATTAGAGGGGTAAATGCAA  49

seq1  GAATTGTCCCGGAATCAATGGGGTATATAGAGAGC-ATTAAATT-AATTG  98
      |||||||||||||||||||||| |||||||||||| |||||||| |||||
seq2  GAATTGTCCCGGAATCAATGGGATATATAGAGAGCAATTAAATTAAATTG  99

seq1  AAAATTGATAATATCAGTAAAATATTTTCACTAGG-AAAATGACACATAA  147
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAATTGATAATATCAGTAAAATATTTTCACTAGGAAAAATGACACATAA  149

seq1  CAAGAGTAATTATTTGAGATTTAATCCCCTGTATT-AAAACTCTATCAGA  196
      |||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  CAAGAGTAATTA-TTGAGATTTAATCCCCTGTATTAAAAACTCTATCAGA  198

seq1  GAGCAGCATAAATGTTGGTGATAAAACAGTGCATGAATGAAAAAG-AAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGCAGCATAAATGTTGGTGATAAAACAGTGCATGAATGAAAAAGAAAAA  248

seq1  AATACCCATTT-AAAACAGTATAGACCAGCCTAAAAAATTAATTCAGCTT  294
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATACCCATTTAAAAACAGTATAGACCAGCCTAAAAAATTAATTCAGCTT  298

seq1  ATTCATGTAGAGTGACAGTGAATAAAATTATTTCTAGGAAGAAAGACCAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTAGAGTGACAGTGAATAAAATTATTTCTAGGAAGAAAGACCAC  348

seq1  CCACACAACCTTACAGAACATTTTCAAGAAGAAAAGAATTCCATAAATCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAACCTTACAGAACATTTTCAAGAAGAAAAGAATTCCATAAATCT  398

seq1  CATATACTATTAAACTCATGTTAATTATGGAAAATATATATTCATATTCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTATTAAACTCATGTTAATTATGGAAAATATATATTCATATTCT  448

seq1  CCTACAGTTGAAATTTCTTTGGAGTTTTACAAGACACATTTAACAACCTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGTTGAAATTTCTTTGGAGTTTTACAAGACACATTTAACAACCTA  498

seq1  AAGGATTTTAGTATGAACCAAACCATTTTAGGCAATATCAACTCTCTCTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTTAGTATGAACCAAACCATTTTAGGCAATATCAACTCTCTCTA  548

seq1  CAAGGCATTATGCTTAGAATTGGGAAGATTGGGAAAGGGTTTGGGGACCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCATTATGCTTAGAATTGGGAAGATTGGGAAAGGGTTTGGGGACCT  598

seq1  GATCAGACTAAGGGGCAATCTGCTGTTACTAATGTTGATGTAACATCATA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGACTAAGGGGCAATCTGCTGTTACTAATGTTGATGTAACATCATA  648

seq1  ATGCTTTACGTGCTTCAGATGGACTCTGACCAATTTCATCACACAATAGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTACGTGCTTCAGATGGACTCTGACCAATTTCATCACACAATAGT  698

seq1  TAATGACCACACACAAAGAGCATACATACTATGCTCACTGTTCATTGAAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACCACACACAAAGAGCATACATACTATGCTCACTGTTCATTGAAG  748

seq1  CTTTTCATCTTTATTGATACATATAGCCACATTTACACAACACCTCTACT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATCTTTATTGATACATATAGCCACATTTACACAACACCTCTACT  798

seq1  CTTCAATATACTTCACCAACACAGAGTATTATAAATCCTTGTCAACTCTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATATACTTCACCAACACAGAGTATTATAAATCCTTGTCAACTCTA  848

seq1  TTGACATTGGAATAAAAAAAAGGAAATTCAATACCATTACCTGGGCTATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTGGAATAAAAAAAAGGAAATTCAATACCATTACCTGGGCTATT  898

seq1  GAATATGGACAATTTATATTTTTTTAATATTTCTTTGAGAATTC  938
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGGACAATTTATATTTTTTTAATATTTCTTTGAGAATTC  942

seq1: chr6_131794572_131795143
seq2: B6Ng01-025E06.g_508_1083

seq1  TCCCACTCACGTCCTCAGGACTGGCTCAACTGCACAATTCCACCACTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTCACGTCCTCAGGACTGGCTCAACTGCACAATTCCACCACTGTC  50

seq1  TTATCCATTGTTCTGCCTAAGGAAGATGGATGTCCTTTTCTTCATTGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCATTGTTCTGCCTAAGGAAGATGGATGTCCTTTTCTTCATTGTTC  100

seq1  TGCAGCTGGTAAGGGGACAGAGACAGTTCTCCTGGTCTCAGACCTTTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTGGTAAGGGGACAGAGACAGTTCTCCTGGTCTCAGACCTTTGGG  150

seq1  CCAACTTTCCCATGATTACCAGTTGAGAAGTAGGGCTGGTTCCACACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTTCCCATGATTACCAGTTGAGAAGTAGGGCTGGTTCCACACAGC  200

seq1  CCTCAGACATCAATATATATTCAGGTGGGACTCCAGATCAGCAAGATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACATCAATATATATTCAGGTGGGACTCCAGATCAGCAAGATAAC  250

seq1  CCTTCTGCTACAGGGTTCAGACACAGACATGATTCTTGGCAGGAGCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCTACAGGGTTCAGACACAGACATGATTCTTGGCAGGAGCATGA  300

seq1  GACAGGACCTCATCATTGCCTTAGGATGCATTGCAGGATATTTATGTCAG  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GACAGGACCTCATCATTGCCTTAAGATGCATTGCAGGATATTTATGTCAG  350

seq1  GCTGCTC-TTCATTTTCCCCAAGTCTCCAGCACTGTCTCTCTTCTGTGCA  399
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTTTCATTTTCCCCAAGTCTCCAGCACTGTCTCTCTTCTGTGCA  400

seq1  TACATTCTTCTGATTCTCTTTATCTTTCCATTTCTCCAACAC-TTTCTTG  448
      ||||||||||||| |||| ||||||||||| ||||||||||| |||||||
seq2  TACATTCTTCTGA-TCTCCTTATCTTTCCA-TTCTCCAACACTTTTCTTG  448

seq1  CTTATAGCAGGTGTCACCTGGGGCCTCTGGGT-GTCTGGAGACTCAGGAG  497
      ||||||||| |||||||||||||||||||||| ||||||| |||||||| 
seq2  CTTATAGCA-GTGTCACCTGGGGCCTCTGGGTGGTCTGGAAACTCAGGAA  497

seq1  T-GCTATGACCCGACTTGTGTCATATACTGGGC-AGGGGTTTTC-TCTGG  544
      | ||||||||||||||||||||   | |||||| || ||||||| | |||
seq2  TGGCTATGACCCGACTTGTGTCTATTCCTGGGCAAGTGGTTTTCTTTTGG  547

seq1  CATAGTTTACTGTCTA-GGCTTCTTGGCA  572
       ||  ||||||||||| || |||||||||
seq2  TATTTTTTACTGTCTATGGTTTCTTGGCA  576