BAC Information

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BAC

Clone NameB6Ng01-025F08
Chromosome6 (Build37)
Map Location 35,061,890 - 35,190,791
singlet/doubletdoublet
Overlap geneCnot4, Nup205
Upstream geneLrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik
Downstream gene1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327, 9330158H04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025F08.bB6Ng01-025F08.g
ACCDH856717DH856718
length717905
definitionDH856717|Mus musculus domesticus DNA, BAC clone: B6Ng01-025F08, 5' end.DH856718|Mus musculus domesticus DNA, BAC clone: B6Ng01-025F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,061,890 - 35,062,606)(35,189,887 - 35,190,791)
sequence
gaattcccatagtattctccactgtggctctggtgcctgctggtttacac
tattttgttgctgttttggggttttttttttgaaacagtgtttctctgta
tagccctggctgtcctgtaactcactctgtagactaggctggccttgaac
tcagaaatcctcctgcctctgcctcccaagtgctgggatcaaagttgtgc
actgccactgcacgcgctgctttacactattaaaccactgcacaaagcat
tcctcttgtactccatgataccttagggatacagatttctctctcactta
ttcccaacaatatgcttaatatatagttcatggaagtgcatttctttaag
cacagcactggggaggcagtggcaagtggatctctatgagtttgaggcca
gtctggcttatacagcaagttccaggccagtcaaggtcatataatgatac
cctaactcaaaaacaaacagacaaacgaacaaacatgtaattattcagga
atgggcatctaagccagtgatgcagcatttgcctggcatgggctcaatcc
caggtactaccccccaaatcagagcaaactaaatcaaaaccaaccccaac
caccctcagcacacacacacacacacacacacacacacagagagagagag
agagagagagagagagagagagagagagagggagagagagagagagagag
agagagggagatagagg
gaattcctaacctaaatgtgtgcaaagaaaatttatgttgtatataaaaa
tattagataattctttatgaaacagttataaaacaaaatacaagctaata
aataaatgaaaagtttaataagaagaggcaactacaagatattcagtaac
aaatcctgctctgactcccaggactcaaacttaaaaggctgtaattccca
tttcctggactctctgaaagggttgggaatttataggcagccttggcaga
tgacatgcagatgttagggcccatgggatggctcctcagcaggtagaggc
caagcctgacaatgtggatttggcctctgaggcctgtatgtaggagagaa
caagactcccataagttattctctgacacaatggaacatgtgtgcaaaca
tacaaatacaataaataagatattaatttttaaaatagttgatataaata
ttgctaccctgaaatctaagtactttccccaaggtttgctgcttttacag
ataaaatagacatgttccaatattcccagaaggcacctaaaaggcccttt
tcttttctcccttttgatgaaacataagaggaaaattttggtgggttttg
gtagtgaatttaagtccttctggaaagttatttaataatataatgtcaaa
aaataccatgtgcaagtatttgaacctaactaaaccagatacacaagtca
acactcttcatcatctatgaaggacgtgaacttcaagcccagtgccttgc
acatgccaggaaagcactcctctattgagccctggcattttttttgaaac
gtgaaaaatagtttataaaaagttaacgggttaagaaaattattgtatta
aaacaatagaatgtaaatccttatatctaattattatatttggtgggggg
ggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35061890_35062606
seq2: B6Ng01-025F08.b_46_762

seq1  GAATTCCCATAGTATTCTCCACTGTGGCTCTGGTGCCTGCTGGTTTACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATAGTATTCTCCACTGTGGCTCTGGTGCCTGCTGGTTTACAC  50

seq1  TATTTTGTTGCTGTTTTGGGGTTTTTTTTTTGAAACAGTGTTTCTCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTGCTGTTTTGGGGTTTTTTTTTTGAAACAGTGTTTCTCTGTA  100

seq1  TAGCCCTGGCTGTCCTGTAACTCACTCTGTAGACTAGGCTGGCCTTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGGCTGTCCTGTAACTCACTCTGTAGACTAGGCTGGCCTTGAAC  150

seq1  TCAGAAATCCTCCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGTTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCCTCCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGTTGTGC  200

seq1  ACTGCCACTGCACGCGCTGCTTTACACTATTAAACCACTGCACAAAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCACTGCACGCGCTGCTTTACACTATTAAACCACTGCACAAAGCAT  250

seq1  TCCTCTTGTACTCCATGATACCTTAGGGATACAGATTTCTCTCTCACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGTACTCCATGATACCTTAGGGATACAGATTTCTCTCTCACTTA  300

seq1  TTCCCAACAATATGCTTAATATATAGTTCATGGAAGTGCATTTCTTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAACAATATGCTTAATATATAGTTCATGGAAGTGCATTTCTTTAAG  350

seq1  CACAGCACTGGGGAGGCAGTGGCAAGTGGATCTCTATGAGTTTGAGGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACTGGGGAGGCAGTGGCAAGTGGATCTCTATGAGTTTGAGGCCA  400

seq1  GTCTGGCTTATACAGCAAGTTCCAGGCCAGTCAAGGTCATATAATGATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCTTATACAGCAAGTTCCAGGCCAGTCAAGGTCATATAATGATAC  450

seq1  CCTAACTCAAAAACAAACAGACAAACGAACAAACATGTAATTATTCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTCAAAAACAAACAGACAAACGAACAAACATGTAATTATTCAGGA  500

seq1  ATGGGCATCTAAGCCAGTGATGCAGCATTTGCCTGGCATGGGCTCAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCATCTAAGCCAGTGATGCAGCATTTGCCTGGCATGGGCTCAATCC  550

seq1  CAGGTACTACCCCCCAAATCAGAGCAAACTAAATCAAAACCAACCCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACTACCCCCCAAATCAGAGCAAACTAAATCAAAACCAACCCCAAC  600

seq1  CACCCTCAGCACACACACACACACACACACACACACACAGAGAGAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCAGCACACACACACACACACACACACACACACAGAGAGAGAGAG  650

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAG  700

seq1  AGAGAGGGAGAGAGAGG  717
      ||||||||||| |||||
seq2  AGAGAGGGAGATAGAGG  717

seq1: chr6_35189887_35190791
seq2: B6Ng01-025F08.g_69_972 (reverse)

seq1  CCCCCCCCCCACCAAATATAATAATTAGATATAAGGATTTACATTCTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACCAAATATAATAATTAGATATAAGGATTTACATTCTATT  50

seq1  GTTTTAATACAATAATTTTCTTAACCCGTTAACTTTTTATAAACTATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATACAATAATTTTCTTAACCCGTTAACTTTTTATAAACTATTTT  100

seq1  TCACGTTTTCAAAAAAAATGCCAGGGCTCAATAGAGGAGTGCTTTCCTGG  150
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACG-TTTCAAAAAAAATGCCAGGGCTCAATAGAGGAGTGCTTTCCTGG  149

seq1  CATGTGCAAGGCACTGGGCTTGAAGTTCACGTCCTTCATAGATGATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCAAGGCACTGGGCTTGAAGTTCACGTCCTTCATAGATGATGAAG  199

seq1  AGTGTTGACTTGTGTATCTGGTTTAGTTAGGTTCAAATACTTGCACATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGACTTGTGTATCTGGTTTAGTTAGGTTCAAATACTTGCACATGG  249

seq1  TATTTTTTGACATTATATTATTAAATAACTTTCCAGAAGGACTTAAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTGACATTATATTATTAAATAACTTTCCAGAAGGACTTAAATTC  299

seq1  ACTACCAAAACCCACCAAAATTTTCCTCTTATGTTTCATCAAAAGGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCAAAACCCACCAAAATTTTCCTCTTATGTTTCATCAAAAGGGAGA  349

seq1  AAAGAAAAGGGCCTTTTAGGTGCCTTCTGGGAATATTGGAACATGTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGGGCCTTTTAGGTGCCTTCTGGGAATATTGGAACATGTCTAT  399

seq1  TTTATCTGTAAAAGCAGCAAACCTTGGGGAAAGTACTTAGATTTCAGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGTAAAAGCAGCAAACCTTGGGGAAAGTACTTAGATTTCAGGGT  449

seq1  AGCAATATTTATATCAACTATTTTAAAAATTAATATCTTATTTATTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATTTATATCAACTATTTTAAAAATTAATATCTTATTTATTGTAT  499

seq1  TTGTATGTTTGCACACATGTTCCATTGTGTCAGAGAATAACTTATGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTTTGCACACATGTTCCATTGTGTCAGAGAATAACTTATGGGAG  549

seq1  TCTTGTTCTCTCCTACATACAGGCCTCAGAGGCCAAATCCACATTGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCTCTCCTACATACAGGCCTCAGAGGCCAAATCCACATTGTCAG  599

seq1  GCTTGGCCTCTACCTGCTGAGGAGCCATCCCATGGGCCCTAACATCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGCCTCTACCTGCTGAGGAGCCATCCCATGGGCCCTAACATCTGCA  649

seq1  TGTCATCTGCCAAGGCTGCCTATAAATTCCCAACCCTTTCAGAGAGTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTGCCAAGGCTGCCTATAAATTCCCAACCCTTTCAGAGAGTCCA  699

seq1  GGAAATGGGAATTACAGCCTTTTAAGTTTGAGTCCTGGGAGTCAGAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGGAATTACAGCCTTTTAAGTTTGAGTCCTGGGAGTCAGAGCAG  749

seq1  GATTTGTTACTGAATATCTTGTAGTTGCCTCTTCTTATTAAACTTTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTACTGAATATCTTGTAGTTGCCTCTTCTTATTAAACTTTTCAT  799

seq1  TTATTTATTAGCTTGTATTTTGTTTTATAACTGTTTCATAAAGAATTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTAGCTTGTATTTTGTTTTATAACTGTTTCATAAAGAATTATC  849

seq1  TAATATTTTTATATACAACATAAATTTTCTTTGCACACATTTAGGTTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTTATATACAACATAAATTTTCTTTGCACACATTTAGGTTAGG  899

seq1  AATTC  905
      |||||
seq2  AATTC  904