BAC Information

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BAC

Clone NameB6Ng01-025M09
Chromosome6 (Build37)
Map Location 132,457,265 - 132,458,320
singlet/doubletsinglet
Overlap genenone
Upstream gene5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818
Downstream genePrh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025M09.bB6Ng01-025M09.g
ACCDH857009DH857010
length1,0491,154
definitionDH857009|Mus musculus domesticus DNA, BAC clone: B6Ng01-025M09, 5' end.DH857010|Mus musculus domesticus DNA, BAC clone: B6Ng01-025M09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagtgtcttgttgtaattgaaatttatatatgaatagcctcaa
caccatcagtcttaattaactatagtatatataaggacacatataagtga
tagtgcttaagctatcctactgatcagagacattgattatatcgaatttg
gatggaaatcattactgacactataaacagatatgaacaaacaccagccc
taccccaatgaacagttgtacacagataatgtcagcaaatgcaatgagat
attcatatactgatagtccttaccttcaatatctggggtactctcttaca
cataatttgtttctaatttactcttactgtgtgaccgtttagaatacgga
cactggcacctcatccttacctcatcctactgggcaaaagttccagtgtg
gagtaaagaatacaagatttcttgctttgataatcataaaataacataat
atggaattcaacgatgccattattttgctcctccttataaagacagcctt
gctccttccagcacacacttggaagaaactccagagcctcttccaagatg
ctggtaatcctgttcacattggtcctgttggccctgagttctgctctagg
aacctggtgaaggtatgagaatatggggatgggtactgtgactcttctta
aagaacaggaaacaacagtgcaggtggggcagaaagatgaaaaaaagaca
gaagatgagagatgaatgagagagcacactatttcagtttttaaaaatag
cctcagattataatacactatgctacataaaattaactacatataccttt
agccttgccgtactgctgatcaagggaagatgacagaattacacatataa
cagatatttggagaaaggtatctgaagtataaactttgaaactattatac
agaaaaatagtacttcttcccaaatttcaattttccacactcattcacat
tccaatatattatcagtgggtgtttatcattcattccaatattattcata
tacctttcattgagagactgaaggtgaatgataagaattagttaaggaa
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatccaaatcaaaacaaccctgagat
tccacctcacaccagtcaggatggctaagatcaaaaattcaggtgacagc
aaatgttggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactgataagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagagaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttcgagctgagatga
gaggatggacgatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcacacagtcagctaatggatggatcacaggctcccaa
tgaggagctagagaagtaccaagagctaaagggatctgcaccctatagtg
acacattatgactagcagtacccagagctctgactctagctgcatatata
tcaaagattgctagtcgcatcactggaaagagagccattgacttgcaact
tttaatgcccagtcagggtacgccaggctaaagggatgtggtggcacggg
gagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132457265_132458320
seq2: B6Ng01-025M09.b_48_1096

seq1  GAATTCCAAGTGTCTTGTTGTAATTGAAATTTATATATGAATAGCCTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTGTCTTGTTGTAATTGAAATTTATATATGAATAGCCTCAA  50

seq1  CACCATCAGTCTTAATTAACTATAGTATATATAAGGACACATATAAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCAGTCTTAATTAACTATAGTATATATAAGGACACATATAAGTGA  100

seq1  TAGTGCTTAAGCTATCCTACTGATCAGAGACATTGATTATATCGAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTTAAGCTATCCTACTGATCAGAGACATTGATTATATCGAATTTG  150

seq1  GATGGAAATCATTACTGACACTATAAACAGATATGAACAAACACCAGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAATCATTACTGACACTATAAACAGATATGAACAAACACCAGCCC  200

seq1  TACCCCAATGAACAGTTGTACACAGATAATGTCAGCAAATGCAATGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCAATGAACAGTTGTACACAGATAATGTCAGCAAATGCAATGAGAT  250

seq1  ATTCATATACTGATAGTCCTTACCTTCAATATCTGGGGTACTCTCTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATACTGATAGTCCTTACCTTCAATATCTGGGGTACTCTCTTACA  300

seq1  CATAATTTGTTTCTAATTTACTCTTACTGTGTGACCGTTTAGAATACGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTGTTTCTAATTTACTCTTACTGTGTGACCGTTTAGAATACGGA  350

seq1  CACTGGCACCTCATCCTTACCTCATCCTACTGGGCAAAAGTTCCAGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCACCTCATCCTTACCTCATCCTACTGGGCAAAAGTTCCAGTGTG  400

seq1  GAGTAAAGAATACAAGATTTCTTGCTTTGATAATCATAAAATAACATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGAATACAAGATTTCTTGCTTTGATAATCATAAAATAACATAAT  450

seq1  ATGGAATTCAACGATGCCATTATTTTGCTCCTCCTTATAAAGACAGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATTCAACGATGCCATTATTTTGCTCCTCCTTATAAAGACAGCCTT  500

seq1  GCTCCTTCCAGCACACACTTGGAAGAAACTCCAGAGCCTCTTCCAAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTCCAGCACACACTTGGAAGAAACTCCAGAGCCTCTTCCAAGATG  550

seq1  CTGGTAATCCTGTTCACATTGGTCCTGTTGGCCCTGAGTTCTGCTCTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATCCTGTTCACATTGGTCCTGTTGGCCCTGAGTTCTGCTCTAGG  600

seq1  AACCTGGTGAAGGTATGAGAATATGGGGATGGGTACTGTGACTCTTCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGTGAAGGTATGAGAATATGGGGATGGGTACTGTGACTCTTCTTA  650

seq1  AAGAACAGGAAACAACAGTGCAGGTGGGGCAGAAAGATGAAAAAAAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGGAAACAACAGTGCAGGTGGGGCAGAAAGATGAAAAAAAGACA  700

seq1  GAAGATGAGAGATGAATGAGAGAGCACACTATTTCAGTTTTTAAAAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGAGAGATGAATGAGAGAGCACACTATTTCAGTTTTTAAAAATAG  750

seq1  CCTCAGATTATAATACACTATGCTACATAAAATTAACTACATATACCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGATTATAATACACTATGCTACATAAAATTAACTACATATACCTTT  800

seq1  AGCCTTGCCGTACTGCTGATCAAGGGAAGATGACAGAATTACACATATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGCCGTACTGCTGATCAAGGGAAGATGACAGAATTACACATATAA  850

seq1  CAGATATTTGGAGAAAGGTATCTGAAGTAATAAAC-TTGAAACTATTATA  899
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  CAGATATTTGGAGAAAGGTATCTGAAGT-ATAAACTTTGAAACTATTATA  899

seq1  CAGAAAAATAGTAACTTCTTCCCAAATTTCAATTTTCCACACTCATTCAC  949
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAATAGT-ACTTCTTCCCAAATTTCAATTTTCCACACTCATTCAC  948

seq1  AATTCCAATATATTATCAGTGGGTGTTTAATCATTCATTCCAATATTTAT  999
       ||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  -ATTCCAATATATTATCAGTGGGTGTTT-ATCATTCATTCCAATA-TTAT  995

seq1  TCATATACCTTTTCATTGAGAAGACAGAAAGGTGAAGGATAAGAATTAAG  1049
      ||||||||| |||||||||| |||| | |||||||| |||||||||||  
seq2  TCATATACC-TTTCATTGAG-AGACTG-AAGGTGAATGATAAGAATTAGT  1042

seq1  TAAGGAA  1056
      |||||||
seq2  TAAGGAA  1049