BAC Information

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BAC

Clone NameB6Ng01-026B15
Chromosome6 (Build37)14 (Build37)
Map Location 81,043,991 - 81,044,503117,592,848 - 117,593,918
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043390
Downstream geneLOC100042991, LOC232143, 1700009C05Rik, AW146020, Mrpl19, Tmem166
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026B15.bB6Ng01-026B15.g
ACCDH857242DH857243
length9461,058
definitionDH857242|Mus musculus domesticus DNA, BAC clone: B6Ng01-026B15, 5' end.DH857243|Mus musculus domesticus DNA, BAC clone: B6Ng01-026B15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(81,043,991 - 81,044,503)(117,592,848 - 117,593,918)
sequence
gaattcagttttctaaaaataacatgtgtagtaaaaattattactcatgc
ttatttcacagaaaattaggaaaaaggcatttctgcaggaggaggatgct
gaaaattgttcaggaagcatccgtaaacatttgactataaatgaaaccaa
gaaaatcttaatgaggtgtcctcagtaggcactttgataatctaatacac
acggactattaatcagtgggtgacctaattccatcattgctctgttcata
ttccaaatattaggaggccacctgtttgctaaaaaaaatatgcctgtaag
caagtatgtggagatgaggattcaagctgtgtgggaagaggtaataatcc
ttgtagaaagggtatctggacttggagcacacatcgatgggagaatacag
atttacaaccaatagggttctgggttcaattcctaggattcttaccaatg
tggctttcttttttttttttttttttttcattttttttattaggtattta
gctcatttacatttccaatgctataccaaaagtcccccttacccacccac
ccccactcccctacccacccactccccccctttggccctggcgttcccct
gtaccggggcacacaaagtctgcgtgtccaatgggcctctctttccagtg
atggccgactaggccatcttttgatacatatgcagctagagtcaagagct
caggggtactggttagttcataatgttgttccacctatagggttgaagat
ccctttagctccttgggtactttctctagctcctccattgggagccctgt
gatccatccattagctgactgtgagcatccacttctgtgtttgctaggcc
ccggcatagtctcactagagacagctacatctgggtcctttcagtaaaat
cttgctagtgtatgcaatggtgtcagcatttggagctgatttgggg
gaattctagttatctattaactcttaccatccataaacttggaaactcag
tggcacttgttccacataatttaatggagctaattttgaattcccaaaaa
taaaggtcgacctctcctggggtaatcaccagagttcaagtttaaaagcc
aggtactgtgtgttactggaatctccatggtggggagacagaggtaggct
gagtcctagggcttactggccagcagacctaaacttatacatgagcagca
ggccagatatagactctgccccaccccaacatggacagtttctgaggaat
aatagctgaagctaaaccttcatctcccagttcccatggccacctgcctg
tctatcatcttctgcatttcctgttgctcacgtacagaaatctttagata
accttctaacacttcagatcatgggcaccaaacttcctaagcaatgtgca
gaaagcatgaagcttaccactgggctctatcttttattatctgttggtgg
cctactttccaagtcacacaactaatataaataaatgtaatttcaataat
tagttcatcatctgatttagaaaaatgtattttgagtttctatgtttcat
agggatgctttacacatgtcaggcctctcagtttgtaaaatgatttgcca
agttgaaaattcttctcatgatagttatcacatttcaattcacaagcaag
tacatgttgtaatcacgatattttcctgtgtctgattttgttaaacattc
attcatttcagaagttttgtaaacaaatttcctccatgacatcatatgca
aatttatagggcaaagcatcatggttaaatactccagcaagcagctcggg
tggggacagagctgagggtcactgctcaatgtgtgcaattagtgaaagtt
tctcagcaagcagattagctccacaactgacttaatgtatagatcactgg
ggatggatgaatacaaacaatttctgcactcagttttcagatcgtgcaat
ctcattcatactgaggacatgaatattcaggactcgcatatagttactaa
aaacttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_81043991_81044503
seq2: B6Ng01-026B15.b_497_978

seq1  GCTTTCTTTTTTTTTTTTTTTTGAAATCTGCTTTTTCAATTTTCTTTTTT  50
      ||||||||||||||||||                          ||||||
seq2  GCTTTCTTTTTTTTTTTT--------------------------TTTTTT  24

seq1  TTCCTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGC  100
      ||| ||     |||||||||||||||||||||||||||||||||||||||
seq2  TTCATT-----TTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGC  69

seq1  TATACCAAAAGTCCCCCATAGCCACCCACCTCCACTCCCCTACCCACCCA  150
      ||||||||||||||||| || ||||||||| |||||||||||||||||||
seq2  TATACCAAAAGTCCCCCTTACCCACCCACCCCCACTCCCCTACCCACCCA  119

seq1  CTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTT  200
      |||||||  |||||||||||||||||||||||| |||||| | ||||| |
seq2  CTCCCCCCCTTTGGCCCTGGCGTTCCCCTGTACCGGGGCACACAAAGTCT  169

seq1  GCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTT  219

seq1  TGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCAT  300
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGATACATATGCAGCTAGAGTCAAGAGCTCAGGGGTACTGGTTAGTTCAT  269

seq1  AATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACT  350
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AATGTTGTTCCACCTATAGGGTTGAAGATCCCTTTAGCTCCTTGGGTACT  319

seq1  TTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTG  369

seq1  TGAGCATCCACTTCTGTGTTTGCTAGGCCCTGGCATAGTCTCACAAGAGA  450
      |||||||||||||||||||||||||||||| ||||||||||||| |||||
seq2  TGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACTAGAGA  419

seq1  CAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATGCAATGGT  500
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  CAGCTACATCTGGGTCCTTTCAGTAAAATCTTGCTAGTGTATGCAATGGT  469

seq1  GTCAGCGTTTGGA  513
      |||||| ||||||
seq2  GTCAGCATTTGGA  482

seq1: chr14_117592848_117593918
seq2: B6Ng01-026B15.g_66_1123

seq1  GAATTCTAGTTATCTATTAACTCTTACCATCCATAAACTTGGAAACTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTATCTATTAACTCTTACCATCCATAAACTTGGAAACTCAG  50

seq1  TGGCACTTGTTCCACATAATTTAATGGAGCTAATTTTGAATTCCCAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTTGTTCCACATAATTTAATGGAGCTAATTTTGAATTCCCAAAAA  100

seq1  TAAAGGTCGACCTCTCCTGGGGTAATCACCAGAGTTCAAGTTTAAAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTCGACCTCTCCTGGGGTAATCACCAGAGTTCAAGTTTAAAAGCC  150

seq1  AGGTACTGTGTGTTACTGGAATCTCCATGGTGGGGAGACAGAGGTAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGTGTGTTACTGGAATCTCCATGGTGGGGAGACAGAGGTAGGCT  200

seq1  GAGTCCTAGGGCTTACTGGCCAGCAGACCTAAACTTATACATGAGCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTAGGGCTTACTGGCCAGCAGACCTAAACTTATACATGAGCAGCA  250

seq1  GGCCAGATATAGACTCTGCCCCACCCCAACATGGACAGTTTCTGAGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGATATAGACTCTGCCCCACCCCAACATGGACAGTTTCTGAGGAAT  300

seq1  AATAGCTGAAGCTAAACCTTCATCTCCCAGTTCCCATGGCCACCTGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTGAAGCTAAACCTTCATCTCCCAGTTCCCATGGCCACCTGCCTG  350

seq1  TCTATCATCTTCTGCATTTCCTGTTGCTCACGTACAGAAATCTTTAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCATCTTCTGCATTTCCTGTTGCTCACGTACAGAAATCTTTAGATA  400

seq1  ACCTTCTAACACTTCAGATCATGGGCACCAAACTTCCTAAGCAATGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTAACACTTCAGATCATGGGCACCAAACTTCCTAAGCAATGTGCA  450

seq1  GAAAGCATGAAGCTTACCACTGGGCTCTATCTTTTATTATCTGTTGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATGAAGCTTACCACTGGGCTCTATCTTTTATTATCTGTTGGTGG  500

seq1  CCTACTTTCCAAGTCACACAACTAATATAAATAAATGTAATTTCAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTTCCAAGTCACACAACTAATATAAATAAATGTAATTTCAATAAT  550

seq1  TAGTTCATCATCTGATTTAGAAAAATGTATTTTGAGTTTCTATGTTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATCATCTGATTTAGAAAAATGTATTTTGAGTTTCTATGTTTCAT  600

seq1  AGGGATGCTTTACACATGTCAGGCCTCTCAGTTTGTAAAATGATTTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGCTTTACACATGTCAGGCCTCTCAGTTTGTAAAATGATTTGCCA  650

seq1  AGTTGAAAATTCTTCTCATGATAGTTATCACATTTCAATTCACAAGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAAATTCTTCTCATGATAGTTATCACATTTCAATTCACAAGCAAG  700

seq1  TACATGTTGTAATCACGATA-TTTCCTGTGTCTGATTTTGTTAAACATTC  749
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TACATGTTGTAATCACGATATTTTCCTGTGTCTGATTTTGTTAAACATTC  750

seq1  ATTCATTTCAGAAGTTTTGTAAACAAATTTCCTCCATGACATCATATGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTCAGAAGTTTTGTAAACAAATTTCCTCCATGACATCATATGCA  800

seq1  AATTTATAGGGCAAAGCATCATGGTTAAATACTCCAGCAAGCAGCTCGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATAGGGCAAAGCATCATGGTTAAATACTCCAGCAAGCAGCTCGGG  850

seq1  TGGGGACAGAGCTGAGGGTCACTGCTCAATGTGTGCAATTAGTGAAAGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAGAGCTGAGGGTCACTGCTCAATGTGTGCAATTAGTGAAAGTT  900

seq1  TCTCAGCAAGCAGATTAGCTCCACAACTGACTTAATGTATAGATCACTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCAAGCAGATTAGCTCCACAACTGACTTAATGTATAGATCACTGG  950

seq1  GGATGGATGAATACAAACAATTTCCTGCACTCAGGTTTTCAGATCGTTGC  999
      ||||||||||||||||||||||| ||||||||| |||||||||||| |||
seq2  GGATGGATGAATACAAACAATTT-CTGCACTCA-GTTTTCAGATCG-TGC  997

seq1  AAATCTCAATTCATACTAGAGGAACATGAATATTCAGTGACTTCGCATTT  1049
       |||||| ||||||||| |||| |||||||||||||| ||| |||||  |
seq2  -AATCTC-ATTCATACT-GAGG-ACATGAATATTCAG-GAC-TCGCA--T  1039

seq1  ATAGTGTTTACTAAATACTTAT  1071
      ||||   |||||||| ||||||
seq2  ATAG---TTACTAAAAACTTAT  1058