BAC Information

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BAC

Clone NameB6Ng01-026C20
Chromosome6 (Build37)13 (Build37)
Map Location 18,835,452 - 18,835,96862,465,775 - 62,466,888
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026C20.bB6Ng01-026C20.g
ACCDH857295DH857296
length9941,102
definitionDH857295|Mus musculus domesticus DNA, BAC clone: B6Ng01-026C20, 5' end.DH857296|Mus musculus domesticus DNA, BAC clone: B6Ng01-026C20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(62,465,775 - 62,466,888)
sequence
gaattctttgttcagttctgggccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctagttcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagttttatcatac
agatctttcacttccttcgttagagtcacgccgagatattttatatattt
gtggctgttgagagggtgttgtttccctaatttctttctcagcc
gaattccagtattttgagctacactttttaaattttattttatatgtatt
ttaattttattttgcatgcatgtgtctgggctctatattttctgagacaa
gaaggcaacagcaaatacttggcaataatagttagcaaccaggtagtttg
gggaatgggacccctgtctactgtaacaataaccagtttatgttaactgc
taggctgtctatctggcaaggtgcttatttaaaatgtacttttgtacatg
ttaagtaaaaatattgcattattttctgcttcattttctattctttatcc
attcctaaatgtgttccaatatcttctttgtttaggatgaaaaataattc
acaaatacatgaagaaaacctgctgtgtgcattcctttgactgcatttgt
tttttcagggatgaaaaatattcattcaataattgcattgaatatgccat
gaggaagctcatcccagcctaaggatttttttcacttgtgggagaatctg
accctggagtgacctaggatatcttgcccaaaaaccaggaagaataaaac
ttccagtggtaaacatctcagataacacttactggtgtcatgaccccgaa
cttctggagctgcagggaagattatggctacgggcctgagacaatctcag
tttgccttggctctctggacctcgcaacacaccctgttgaccacttttaa
cttggatgactgtgaaatcctggtgtcctcactctgtaagtaccatgaat
ataggcatgtgcaaccataccttgtttaggtggcttccacttcaattact
aatgcattagaattacagcatgtgtaagataaacagttccagttaagtag
attcagaagccacttaactctgtgaccctcagtttaccatctgtagaata
aaaatagaagtctactctagtttggtgaattatacagatgccatcataag
ccaaaattttatatgtatataaaatatatatagtactggctgttcttgga
actccttttaaaccagctgcctcaacctcagaattcctcttgcctctgct
cctgggtgctgctggaataaaggatgtggccccacgccctgcatatattg
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-026C20.b_45_562 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      || ||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||| |||||||||||||||||||| |||| ||||||||| ||
seq2  AGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGGCCCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr13_62465775_62466888
seq2: B6Ng01-026C20.g_69_1170

seq1  GAATTCCAGTATTTTGAGCTACACTTTTTAAATTTTATTTTATATGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTATTTTGAGCTACACTTTTTAAATTTTATTTTATATGTATT  50

seq1  TTAATTTTATTTTGCATGCATGTGTCTGGGCTCTATATTTTCTGAGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTATTTTGCATGCATGTGTCTGGGCTCTATATTTTCTGAGACAA  100

seq1  GAAGGCAACAGCAAATACTTGGCAATAATAGTTAGCAACCAGGTAGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAACAGCAAATACTTGGCAATAATAGTTAGCAACCAGGTAGTTTG  150

seq1  GGGAATGGGACCCCTGTCTACTGTAACAATAACCAGTTTATGTTAACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGGGACCCCTGTCTACTGTAACAATAACCAGTTTATGTTAACTGC  200

seq1  TAGGCTGTCTATCTGGCAAGGTGCTTATTTAAAATGTACTTTTGTACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGTCTATCTGGCAAGGTGCTTATTTAAAATGTACTTTTGTACATG  250

seq1  TTAAGTAAAAATATTGCATTATTTTCTGCTTCATTTTCTATTCTTTATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAAAAATATTGCATTATTTTCTGCTTCATTTTCTATTCTTTATCC  300

seq1  ATTCCTAAATGTGTTCCAATATCTTCTTTGTTTAGGATGAAAAATAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAAATGTGTTCCAATATCTTCTTTGTTTAGGATGAAAAATAATTC  350

seq1  ACAAATACATGAAGAAAACCTGCTGTGTGCATTCCTTTGACTGCATTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACATGAAGAAAACCTGCTGTGTGCATTCCTTTGACTGCATTTGT  400

seq1  TTTTTCAGGGATGAAAAATATTCATTCAATAATTGCATTGAATATGCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGGGATGAAAAATATTCATTCAATAATTGCATTGAATATGCCAT  450

seq1  GAGGAAGCTCATCCCAGCCTAAGGATTTTTTTCACTTGTGGGAGAATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGCTCATCCCAGCCTAAGGATTTTTTTCACTTGTGGGAGAATCTG  500

seq1  ACCCTGGAGTGACCTAGGATATCTTGCCCAAAAACCAGGAAGAATAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGAGTGACCTAGGATATCTTGCCCAAAAACCAGGAAGAATAAAAC  550

seq1  TTCCAGTGGTAAACATCTCAGATAACACTTACTGGTGTCATGACCCCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGGTAAACATCTCAGATAACACTTACTGGTGTCATGACCCCGAA  600

seq1  CTTCTGGAGCTGCAGGGAAGATTATGGCTACGGGCCTGAGACAATCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGAGCTGCAGGGAAGATTATGGCTACGGGCCTGAGACAATCTCAG  650

seq1  TTTGCCTTGGCTCTCTGGACCTCGCAACACACCCTGTTGACCACTTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTGGCTCTCTGGACCTCGCAACACACCCTGTTGACCACTTTTAA  700

seq1  CTTGGATGACTGTGAAATCCTGGTGTCCTCACTCTGTAAGTACCATGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATGACTGTGAAATCCTGGTGTCCTCACTCTGTAAGTACCATGAAT  750

seq1  ATAGGCATGTGCAACCATACCTTGTTTAGGTGGCTTCCACTTCAATTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCATGTGCAACCATACCTTGTTTAGGTGGCTTCCACTTCAATTACT  800

seq1  AATGCATTAGAATTACAGCATGTGTAAGATAAACAGTTCCAGTTAAGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTAGAATTACAGCATGTGTAAGATAAACAGTTCCAGTTAAGTAG  850

seq1  ATTCAGAAGCCACTTAACTCTGTGACCCTCAGTTTTACCATCTGTAGAAT  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTCAGAAGCCACTTAACTCTGTGACCCTCAG-TTTACCATCTGTAGAAT  899

seq1  AAAAATAGAAGTCTACCCTAGTTTTGGTGAATTATAACAGATGCCATCAT  950
      |||||||||||||||| |||| ||||||||||||| ||||||||||||||
seq2  AAAAATAGAAGTCTACTCTAG-TTTGGTGAATTAT-ACAGATGCCATCAT  947

seq1  AAGCCAAAATTTTATATGTATATAAAATATATATAGTACTGGCTG-TCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||| || |
seq2  AAGCCAAAATTTTATATGTATATAAAATATATATAGTACTGGCTGTTCTT  997

seq1  GGAACTCACTTTGTAAACCAGGCTGGCCTCAAACTCAGAAATCCTCCTGC  1049
      ||||||| |||| ||||||| ||| ||||||| ||||||| ||||| |||
seq2  GGAACTC-CTTT-TAAACCA-GCT-GCCTCAACCTCAGAATTCCTCTTGC  1043

seq1  CTCTGCCTCCTGAGTGCTGCTGGGATTAAAGGTATGTGCCACCACGCCCT  1099
      ||||| |||||| |||||||| ||| |||||| ||||| | |||||||||
seq2  CTCTG-CTCCTGGGTGCTGCT-GGAATAAAGG-ATGTGGCCCCACGCCCT  1090

seq1  GCAAATAATATTGTA  1114
      |||    ||||||||
seq2  GCA---TATATTGTA  1102