BAC Information

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BAC

Clone NameB6Ng01-026H17
Chromosome6 (Build37)
Map Location 19,681,092 - 19,682,234
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026H17.bB6Ng01-026H17.g
ACCDH857512DH857513
length1,1571,117
definitionDH857512|Mus musculus domesticus DNA, BAC clone: B6Ng01-026H17, 5' end.DH857513|Mus musculus domesticus DNA, BAC clone: B6Ng01-026H17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttttttcattattgttttacttatttatattccagatat
tgtttccacttcctggtcccactatcagaattcttcatcccgtttcccct
caagtttgcctctaaaagtgtgccccactctcatgccccagccctggtta
tcccctttccctggggtagcaggtatctacaggcaaattatctccaactg
aggcaagacaaggcagttctctgctacatatatgctgtgggactttggat
taacctatgtatgctctttggttggtgggttagcctctggaagctcccag
ggtcaggatcagttgacactgttggcatttctcactgttggttgccaaac
ccttcagctccttcaattttttcccttaactcttccataggtttccttga
cttcagtccaatgtttatctgtgagtatcttcatttgtctcagccagcta
ttgatagagcctctcagattacagccatgctagctatagcatcagtaata
gtgtcattgtttagtgcctggccatggatgggtcccacatttggccagtc
actggacagcctttccttcagtctctgttctactttttgtccctgcattt
tttttttagacagaaacaattctgggcattctagattagaaattttggaa
gtgtgttggtcaccccatctttctactggaaactgtgtctatctaatggg
gatggtctcttcaggttccatcacttcactgttggacatttaagctaaga
cactctattgagaattcctaaaatgatgctctatctgcaaagaatgattt
tctcattaaaactaaagtcacaaagagatgttggaatgttataggtcaga
agataatggccttatctttggctagctttagcccctgaatagccattaca
aactccttgcttgagcaaacatcttgcaataatagataaaagtctctaaa
attatatactaaacagataaatggattctatcattcaaaagccatatgtc
attagatacatcagagctatgaaatcttccacatcttaccccactgatta
ctcatatgtattgattgcttaatcgcactaaagataccggaaatcataaa
ctacgaatctttaagagagaagccggatttgggggacaaacttctatctt
gcactca

gaattccaaatgttacaaatatctacatctggaaaaaacatgctttagtt
agagcatgagtcaaaacacagtgagaaatgaccaggacactcttctcagg
actctgagacttcgtgttttgttacagtttgattattcatattttagtat
tttataaattaaaaatattgtctaaaccttatgaatcacatattaaagtg
taaataactcactatattctgtttaagtcaacaaagataattaccctcat
ttttgttaactttatgacttagcaacacgaaaatgttgatttggttggta
catacatacaaaactctcaactgtgcaatattttgttgtaaaagtcatta
tttcattaatgttgaagtagacaatctattaatgtgcacaggttttgcat
aagaacagtatatatcaatctcacaatttattttgtatttgtctttttaa
ctatttactaaatggctaagaggggaaagttccagaacagttcttattct
aagcttactttctaacttctcatgtgtactatagacaacagaaaaagcta
aaaaaaacttgtgttgataattgtgcaagtctacattacccactcagttg
accagcctataaaacttactcttctgcccattatagttctatttgtattc
acataattctgactctacatactcattgtgttcatggtagcatttagaag
aagcaacagactttaaaaggaaacaaaaacatgagacaatctgaaagaga
aagcaactgacacaggtggaaacaagaatggaagatcacagaatttaaaa
ctaggcatggttatggtaagtgactataacctagcccttggtagggtaat
gcagaaacatagtaaatttgagaccagtcaagtatatgtactgagaccct
acctccaaacaagccaaacaaaaattatttaatgcagaaaatggtatata
tatatatatatatatatttacaacaccatgatacatatgatggttttcac
tggaggattttgtgagtattgtgaatgtgcagtgaactactatgaactta
gatcttgctggaggaaatcatttaagctgaccttggttgtgattacccag
aatatgtgttttgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19681092_19682234
seq2: B6Ng01-026H17.g_67_1183 (reverse)

seq1  TGAGCAAAACACATCTATCTTAGTATAATTCTATTA-ACACAGAGTCAGC  49
      |||||||||||||| | |||  |||       || | |  ||  ||||||
seq2  TGAGCAAAACACATAT-TCTGGGTA-------ATCACAACCAAGGTCAGC  42

seq1  TTTAAATGAATTTCCTACCAGCTAGAATCTAAAGTTCATTAAGTAGTTCA  99
       ||||||| ||||||| ||||| || |||| ||||||||  |||||||||
seq2  -TTAAATG-ATTTCCT-CCAGCAAG-ATCT-AAGTTCAT--AGTAGTTCA  85

seq1  CTGGCACATTCAACAAATACTCAACAAAATTCCTCAGTTGATACACATCA  149
      || |||||||||   ||||||| |||||| |||||   ||| |  |||||
seq2  CT-GCACATTCA--CAATACTC-ACAAAA-TCCTCCAGTGAAAACCATCA  130

seq1  TAATGTATCATGGTTGTTTGTAATATATATATATATATATATATATACCA  199
      | ||||||||||||   |||||| ||||||||||||||||||||||||||
seq2  T-ATGTATCATGGT--GTTGTAA-ATATATATATATATATATATATACCA  176

seq1  TTTTCTTGCATTAAATAATTTTTTGTTTGGCTTGTTTTGGAGGTAGGGTC  249
      ||||| |||||||||||| ||||||||||||||| |||||||||||||||
seq2  TTTTC-TGCATTAAATAA-TTTTTGTTTGGCTTG-TTTGGAGGTAGGGTC  223

seq1  TCAGTACATATACTTGACTGGTCTCAAATTTACTATGTTTCTGCATTACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACATATACTTGACTGGTCTCAAATTTACTATGTTTCTGCATTACC  273

seq1  CTACCAAGGGCTAGGTTATAGTCACTTACCATAACCATGCCTAGTTTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAGGGCTAGGTTATAGTCACTTACCATAACCATGCCTAGTTTTAA  323

seq1  ATTCTGTGATCTTCCATTCTTGTTTCCACCTGTGTCAGTTGCTTTCTCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGATCTTCCATTCTTGTTTCCACCTGTGTCAGTTGCTTTCTCTT  373

seq1  TCAGATTGTCTCATGTTTTTGTTTCCTTTTAAAGTCTGTTGCTTCTTCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTGTCTCATGTTTTTGTTTCCTTTTAAAGTCTGTTGCTTCTTCTA  423

seq1  AATGCTACCATGAACACAATGAGTATGTAGAGTCAGAATTATGTGAATAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTACCATGAACACAATGAGTATGTAGAGTCAGAATTATGTGAATAC  473

seq1  AAATAGAACTATAATGGGCAGAAGAGTAAGTTTTATAGGCTGGTCAACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAACTATAATGGGCAGAAGAGTAAGTTTTATAGGCTGGTCAACTG  523

seq1  AGTGGGTAATGTAGACTTGCACAATTATCAACACAAGTTTTTTTTAGCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTAATGTAGACTTGCACAATTATCAACACAAGTTTTTTTTAGCTT  573

seq1  TTTCTGTTGTCTATAGTACACATGAGAAGTTAGAAAGTAAGCTTAGAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTGTCTATAGTACACATGAGAAGTTAGAAAGTAAGCTTAGAATA  623

seq1  AGAACTGTTCTGGAACTTTCCCCTCTTAGCCATTTAGTAAATAGTTAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTTCTGGAACTTTCCCCTCTTAGCCATTTAGTAAATAGTTAAAA  673

seq1  AGACAAATACAAAATAAATTGTGAGATTGATATATACTGTTCTTATGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATACAAAATAAATTGTGAGATTGATATATACTGTTCTTATGCAA  723

seq1  AACCTGTGCACATTAATAGATTGTCTACTTCAACATTAATGAAATAATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGCACATTAATAGATTGTCTACTTCAACATTAATGAAATAATGA  773

seq1  CTTTTACAACAAAATATTGCACAGTTGAGAGTTTTGTATGTATGTACCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACAACAAAATATTGCACAGTTGAGAGTTTTGTATGTATGTACCAA  823

seq1  CCAAATCAACATTTTCGTGTTGCTAAGTCATAAAGTTAACAAAAATGAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCAACATTTTCGTGTTGCTAAGTCATAAAGTTAACAAAAATGAGG  873

seq1  GTAATTATCTTTGTTGACTTAAACAGAATATAGTGAGTTATTTACACTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATCTTTGTTGACTTAAACAGAATATAGTGAGTTATTTACACTTT  923

seq1  AATATGTGATTCATAAGGTTTAGACAATATTTTTAATTTATAAAATACTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGATTCATAAGGTTTAGACAATATTTTTAATTTATAAAATACTA  973

seq1  AAATATGAATAATCAAACTGTAACAAAACACGAAGTCTCAGAGTCCTGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAATAATCAAACTGTAACAAAACACGAAGTCTCAGAGTCCTGAG  1023

seq1  AAGAGTGTCCTGGTCATTTCTCACTGTGTTTTGACTCATGCTCTAACTAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGTCCTGGTCATTTCTCACTGTGTTTTGACTCATGCTCTAACTAA  1073

seq1  AGCATGTTTTTTCCAGATGTAGATATTTGTAACATTTGGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTTTTTTCCAGATGTAGATATTTGTAACATTTGGAATTC  1117


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