BAC Information

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BAC

Clone NameB6Ng01-027B19
Chromosome6 (Build37)
Map Location 22,397,193 - 22,397,768
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnd2, Tspan12, LOC100041358, Ing3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948
Downstream geneLOC100040959, LOC668018, LOC668022, Ptprz1, Aass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027B19.bB6Ng01-027B19.g
ACCDH857948DH857949
length5701,095
definitionDH857948|Mus musculus domesticus DNA, BAC clone: B6Ng01-027B19, 5' end.DH857949|Mus musculus domesticus DNA, BAC clone: B6Ng01-027B19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atcagcctgtaaccagtgactaagtcagaatacggtaaacttaatcgact
tgttccaaagcaagcacactttgcctgataatgtattttcccaaataaaa
tccacttcttatttagaacttctgacttctctacctgactcttcgtgacc
aatcccaagttttctggttactattttatagtcaaacaaaaaccaaagac
aaacaagcaaacaaaacccaccaagccagaagagatggataagcatggtt
aggaaacttctaagtacaattcgctgcttgggccgtatacaaaaacactg
tgagctgttttagcaatcaagatgctgactcccaattaagtgtgttatga
atatggcaaaacaaacaaaaccaaacctattttaaaggtgctaagagaac
tcttgtggtcaagaggaaagtataaaggatacaggctcacagaagcaagc
cttatgtgaggcagaacctggagctggtcagtaggcttgcatatcctgat
caccactgcgttccttcactatacctctctctctctctctctctctctct
ctctctctctctctctctct
gaattcacatatgcaactatcctgctgtatcaggaaaataccgtgtcttg
cagtcatccattgcttctgggtcttataatcttttggctccctcttccag
aatgagccctcagccttgggatggggttgtgtgatataaaataccctgtt
tgaggccaagtatttcttgatctcttattctctgcaccttgatcaatgta
agtctttgtgttggtcaccatctactgcaaaaagaagcttccctggtgag
ggctgagaggcaaatttatctttgggtataaagataaatcactaggagct
gttccatccacttggtagagtaatggtaaaaaggttttcctagggtctat
gccctatctagccacaggtttttagccctgatagctatgtcagatatggg
tttcaagttatggaatgactttaaatccaatcagaaagtgggtgatcact
cccaggatatccatgccactattacaccagtgaactctcttgccaggctg
gtcattgttgaagcttcagaatacacggacctagagacaattattctaag
tgaagcaacccagttacaaaaaagaaaacttcacactttcagtgatggat
gccatctttgaacctttatgtatgtgtgttccatatgaaatacaaacata
tttgaaagtgaagtgaagaaattagtaaaggaccagggggcttaaaggga
tagaatatagaacacagtaataaaactattaaagaggagtaggggaacag
gaagaattaaatggggttgcagttggaagtgcagagtagaggaaagacca
tgaaaagagataacgagcactagagtatttgaaaaaaacaaagcatgtta
gcatatgccttttattatcagcactcaggatgtgcaggcaggtggatctc
tggtagtgcaagccactctggtctacattttaagttccagacagccaaag
ctacataggagacctgggctcagaatattagaataatagtttaaagtatt
aggaatctaataatgtaaacctccctaaatgtacctgactctcaataaaa
aaagtcaaagggaagtttcatcctggggaggtttcaaaagtatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22397193_22397768
seq2: B6Ng01-027B19.b_38_613

seq1  GAATTCATCAGCCTGTAACCAGTGACTAAGTCAGAATACGGTAAACTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGCCTGTAACCAGTGACTAAGTCAGAATACGGTAAACTTAA  50

seq1  TCGACTTGTTCCAAAGCAAGCACACTTTGCCTGATAATGTATTTTCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTTGTTCCAAAGCAAGCACACTTTGCCTGATAATGTATTTTCCCAA  100

seq1  ATAAAATCCACTTCTTATTTAGAACTTCTGACTTCTCTACCTGACTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCCACTTCTTATTTAGAACTTCTGACTTCTCTACCTGACTCTTC  150

seq1  GTGACCAATCCCAAGTTTTCTGGTTACTATTTTATAGTCAAACAAAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCAATCCCAAGTTTTCTGGTTACTATTTTATAGTCAAACAAAAACC  200

seq1  AAAGACAAACAAGCAAACAAAACCCACCAAGCCAGAAGAGATGGATAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAAACAAGCAAACAAAACCCACCAAGCCAGAAGAGATGGATAAGC  250

seq1  ATGGTTAGGAAACTTCTAAGTACAATTCGCTGCTTGGGCCGTATACAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAGGAAACTTCTAAGTACAATTCGCTGCTTGGGCCGTATACAAAA  300

seq1  ACACTGTGAGCTGTTTTAGCAATCAAGATGCTGACTCCCAATTAAGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGAGCTGTTTTAGCAATCAAGATGCTGACTCCCAATTAAGTGTG  350

seq1  TTATGAATATGGCAAAACAAACAAAACCAAACCTATTTTAAAGGTGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAATATGGCAAAACAAACAAAACCAAACCTATTTTAAAGGTGCTAA  400

seq1  GAGAACTCTTGTGGTCAAGAGGAAAGTATAAAGGATACAGGCTCACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTCTTGTGGTCAAGAGGAAAGTATAAAGGATACAGGCTCACAGAA  450

seq1  GCAAGCCTTATGTGAGGCAGAACCTGGAGCTGGTCAGTAGGCTTGCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCTTATGTGAGGCAGAACCTGGAGCTGGTCAGTAGGCTTGCATAT  500

seq1  CCTGATCACCACTGCGTTCCTTCACTATACCTCTCTCTCTCTCTCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCACCACTGCGTTCCTTCACTATACCTCTCTCTCTCTCTCTCTCT  550

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCT  576
      ||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCT  576